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The map label for this gene is ylbK [H]

Identifier: 94313820

GI number: 94313820

Start: 1562016

End: 1562957

Strand: Direct

Name: ylbK [H]

Synonym: Rmet_4898

Alternate gene names: 94313820

Gene position: 1562016-1562957 (Clockwise)

Preceding gene: 94313819

Following gene: 94313821

Centisome position: 60.54

GC content: 64.86

Gene sequence:

>942_bases
ATGGAAAAGACTGCATTCGTATTCGCCGGCGGTGGCAGCCTGGGCGCCATCGAGGTCGGCATGCTGCGGGAACTGGTGAA
ATGGGGTGTGGCACCGGACCTTGTCATCGGCGCATCTGCGGGGGCGATCAACGGGGCCTACTTTGCATGCAACCCCCATG
CCGAAGGTACCGCCAGGCTGGAATCACTGTGGCGGAGCATCACCAGGGCGGAAGTCTTGCCATGGTCGTGGCGCAGCATG
TTCGGGATGATCGCTGGCAACCGGGGACACCTTGTGGAATCCTTCGGTTTGCGGCGCCTGCTCAATCGCAACTTTGGCGC
GGCCAGGCTCGAAGAGTCCGCCGTACCGCTTTATGTGGTCGCCACGGACATGCAGACAGGTGCCGAAGTCGTGCTCTCCG
CGGGCAACATCGTCGATGCAGTGTTGGCCAGCGCCGCCATTCCCGGTGTCTTTCCGCCGGTGGAAGTCGGTGGCCGCAAG
CTGATCGATGGTGGCGTCGCCAACAATACTCCTGTATCCACCGCCATCCGGCTGGGCGCGACCCGCATCATCGTGCTGCC
AGCCGGCTTTGCCTGCGCCGAACGCAGGCCGCCACGCGGGGCCGTCGAGCACGCCTTCAATGCCCTGTCGCTGCTAGTGG
CGCGGCAGCTCGTGTATGACCTGGAACGCTGGTCGGAGCAGGCCCAGATCGCAGTGGTGCCACCGCTTTGCCCGCTAGAT
ATCTCGCCTTATGACTACACTCGCTGCGGCGAACTGATCGAGCGTGCAGCCGAGGCAACGGTGGCCTGGCTGCGTGCCGA
CGGCCTGTCCAGCCGACGCGTGCCGGGCGCGCTGGAGCCGCATACGCACGACGAAGCGTCGCCAAGCTGCAGCACAGATC
TGCTTGGCCCCACCAGTGGACACGCCCATGCCAAGCAGCATGGGCACGGCCATCCACACTGA

Upstream 100 bases:

>100_bases
CCATCCCTTCTCTTTGGAGCTGGCCGGAAGTGGCCTATGCTGTCCTCACGACCATCACGCGACAACATTGACGGGCGCCC
TGCCCTTCATACCGATATCC

Downstream 100 bases:

>100_bases
TATCTCAAGCGCACGCAGCAGCTGGCCGTAAAATCGTGGCTGACCATTCAAATTCAGAAGCCACAGCTACTCGATGAAGA
CGCTTGCCTTGTTTTGCGCC

Product: putative patatin-like phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MEKTAFVFAGGGSLGAIEVGMLRELVKWGVAPDLVIGASAGAINGAYFACNPHAEGTARLESLWRSITRAEVLPWSWRSM
FGMIAGNRGHLVESFGLRRLLNRNFGAARLEESAVPLYVVATDMQTGAEVVLSAGNIVDAVLASAAIPGVFPPVEVGGRK
LIDGGVANNTPVSTAIRLGATRIIVLPAGFACAERRPPRGAVEHAFNALSLLVARQLVYDLERWSEQAQIAVVPPLCPLD
ISPYDYTRCGELIERAAEATVAWLRADGLSSRRVPGALEPHTHDEASPSCSTDLLGPTSGHAHAKQHGHGHPH

Sequences:

>Translated_313_residues
MEKTAFVFAGGGSLGAIEVGMLRELVKWGVAPDLVIGASAGAINGAYFACNPHAEGTARLESLWRSITRAEVLPWSWRSM
FGMIAGNRGHLVESFGLRRLLNRNFGAARLEESAVPLYVVATDMQTGAEVVLSAGNIVDAVLASAAIPGVFPPVEVGGRK
LIDGGVANNTPVSTAIRLGATRIIVLPAGFACAERRPPRGAVEHAFNALSLLVARQLVYDLERWSEQAQIAVVPPLCPLD
ISPYDYTRCGELIERAAEATVAWLRADGLSSRRVPGALEPHTHDEASPSCSTDLLGPTSGHAHAKQHGHGHPH
>Mature_313_residues
MEKTAFVFAGGGSLGAIEVGMLRELVKWGVAPDLVIGASAGAINGAYFACNPHAEGTARLESLWRSITRAEVLPWSWRSM
FGMIAGNRGHLVESFGLRRLLNRNFGAARLEESAVPLYVVATDMQTGAEVVLSAGNIVDAVLASAAIPGVFPPVEVGGRK
LIDGGVANNTPVSTAIRLGATRIIVLPAGFACAERRPPRGAVEHAFNALSLLVARQLVYDLERWSEQAQIAVVPPLCPLD
ISPYDYTRCGELIERAAEATVAWLRADGLSSRRVPGALEPHTHDEASPSCSTDLLGPTSGHAHAKQHGHGHPH

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=192, Percent_Identity=32.2916666666667, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI116256487, Length=192, Percent_Identity=32.2916666666667, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI260656043, Length=192, Percent_Identity=32.2916666666667, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI260656039, Length=192, Percent_Identity=32.2916666666667, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI260656037, Length=192, Percent_Identity=32.2916666666667, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI148727290, Length=192, Percent_Identity=28.125, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI148727335, Length=192, Percent_Identity=28.125, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI226510936, Length=183, Percent_Identity=28.9617486338798, Blast_Score=68, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6323581, Length=205, Percent_Identity=25.3658536585366, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33182; Mature: 33182

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTAFVFAGGGSLGAIEVGMLRELVKWGVAPDLVIGASAGAINGAYFACNPHAEGTARL
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCHHHHH
ESLWRSITRAEVLPWSWRSMFGMIAGNRGHLVESFGLRRLLNRNFGAARLEESAVPLYVV
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCEEEE
ATDMQTGAEVVLSAGNIVDAVLASAAIPGVFPPVEVGGRKLIDGGVANNTPVSTAIRLGA
EECCCCCCHHEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCC
TRIIVLPAGFACAERRPPRGAVEHAFNALSLLVARQLVYDLERWSEQAQIAVVPPLCPLD
EEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
ISPYDYTRCGELIERAAEATVAWLRADGLSSRRVPGALEPHTHDEASPSCSTDLLGPTSG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HAHAKQHGHGHPH
CCHHHHCCCCCCC
>Mature Secondary Structure
MEKTAFVFAGGGSLGAIEVGMLRELVKWGVAPDLVIGASAGAINGAYFACNPHAEGTARL
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCHHHHH
ESLWRSITRAEVLPWSWRSMFGMIAGNRGHLVESFGLRRLLNRNFGAARLEESAVPLYVV
HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCEEEE
ATDMQTGAEVVLSAGNIVDAVLASAAIPGVFPPVEVGGRKLIDGGVANNTPVSTAIRLGA
EECCCCCCHHEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCC
TRIIVLPAGFACAERRPPRGAVEHAFNALSLLVARQLVYDLERWSEQAQIAVVPPLCPLD
EEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
ISPYDYTRCGELIERAAEATVAWLRADGLSSRRVPGALEPHTHDEASPSCSTDLLGPTSG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HAHAKQHGHGHPH
CCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]