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The map label for this gene is 94313738

Identifier: 94313738

GI number: 94313738

Start: 1463556

End: 1464053

Strand: Direct

Name: 94313738

Synonym: Rmet_4816

Alternate gene names: NA

Gene position: 1463556-1464053 (Clockwise)

Preceding gene: 94313736

Following gene: 94313739

Centisome position: 56.73

GC content: 62.65

Gene sequence:

>498_bases
ATGAAGTTAGGCTGCTATGCTCAAAGCATGACCACGCCACCGCCCGTCGACCTCACGAACTGCTCGATTGCCGCCACGCT
CTCGTTGATTGGCGAGAAGTGGACGATTCTTATCTTGCGCGATGTGTTCTCCGGAGTACGCCGCTTCGATGACTTCCTCG
AGCGCCTGCAATGCTCGCCGGCCGTACTGTCGGCACGGCTCAAGACGCTGACCGAGGCAGGATTGCTGCGCAAGGTCAGC
TACAAGGAGCCTGGAGAGCGGGAGCGCTTCGCCTACCATCCAACGCGCGCGGCGGTCGATCTGCTTCCCGTCCTGGTCGG
ACTGATGCAATGGGGCGATGCCCATATGGCAGACGACGGTAGCGGCCCGGCCGAAGTCCGCTCCAAACTCTCCGGACTCA
AGGTGCGTGCCGCATTGATCGACGAGGCTGGGGAGACTGTCTCACCCTCGGACATGCAACTGCTGGCCGTCCCCGCCTCC
ACCGACACGGCCGCCTAA

Upstream 100 bases:

>100_bases
CGGTGTCGCCACCTGGTTGTCGTCTTCGACACGGCTCATGGTCCGCTCCTGACTACGTTTTGTATAGTCAGGACTATAGT
CGAAACCCTAACTTTTGCAA

Downstream 100 bases:

>100_bases
GCAAACGCACCGCTTGCACACATTGCACCGCACCATTGCCGTGCGGACGCCCAATACTGGCGCTGCACCATGTCGCGTCA
ATGTGCACGCCCTTCCACTC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKLGCYAQSMTTPPPVDLTNCSIAATLSLIGEKWTILILRDVFSGVRRFDDFLERLQCSPAVLSARLKTLTEAGLLRKVS
YKEPGERERFAYHPTRAAVDLLPVLVGLMQWGDAHMADDGSGPAEVRSKLSGLKVRAALIDEAGETVSPSDMQLLAVPAS
TDTAA

Sequences:

>Translated_165_residues
MKLGCYAQSMTTPPPVDLTNCSIAATLSLIGEKWTILILRDVFSGVRRFDDFLERLQCSPAVLSARLKTLTEAGLLRKVS
YKEPGERERFAYHPTRAAVDLLPVLVGLMQWGDAHMADDGSGPAEVRSKLSGLKVRAALIDEAGETVSPSDMQLLAVPAS
TDTAA
>Mature_165_residues
MKLGCYAQSMTTPPPVDLTNCSIAATLSLIGEKWTILILRDVFSGVRRFDDFLERLQCSPAVLSARLKTLTEAGLLRKVS
YKEPGERERFAYHPTRAAVDLLPVLVGLMQWGDAHMADDGSGPAEVRSKLSGLKVRAALIDEAGETVSPSDMQLLAVPAS
TDTAA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 17817; Mature: 17817

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGCYAQSMTTPPPVDLTNCSIAATLSLIGEKWTILILRDVFSGVRRFDDFLERLQCSP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
AVLSARLKTLTEAGLLRKVSYKEPGERERFAYHPTRAAVDLLPVLVGLMQWGDAHMADDG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC
SGPAEVRSKLSGLKVRAALIDEAGETVSPSDMQLLAVPASTDTAA
CCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MKLGCYAQSMTTPPPVDLTNCSIAATLSLIGEKWTILILRDVFSGVRRFDDFLERLQCSP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
AVLSARLKTLTEAGLLRKVSYKEPGERERFAYHPTRAAVDLLPVLVGLMQWGDAHMADDG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCCCC
SGPAEVRSKLSGLKVRAALIDEAGETVSPSDMQLLAVPASTDTAA
CCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]