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The map label for this gene is 94313692

Identifier: 94313692

GI number: 94313692

Start: 1414158

End: 1415429

Strand: Reverse

Name: 94313692

Synonym: Rmet_4770

Alternate gene names: NA

Gene position: 1415429-1414158 (Counterclockwise)

Preceding gene: 94313698

Following gene: 94313691

Centisome position: 54.86

GC content: 64.94

Gene sequence:

>1272_bases
ATGCGTGAAACAAAGTACCAGACCGGTATGATCGATCCGCTGAACAAGGCGATGGGGCGTCTGGACGCGCCGCTCACGCC
GTCCGAGGCGGGTCAGCCGGGCTGGCGTCTGCTGGCCGAAGAGCTCAGTCTCCCGGCCGCAGTGCTCTATGAAGACCGTC
TGACGCACAACCTGCAGTGGATGCGCAATTTCATGGGCGCATACGGCGTGCAGCTGGCACCGCATGGCAAGACGACGATG
GCGCCGAAACTGTTCGCGCGTCAGCTTGCCGAGGGCGCGTGGGGCATCACGCTGGCCACCGCCCATCAGACCGCGGCGGC
AGCCGCGCACGGCGTCAAGCGCGTGCTGATGGCCAATCAGCTTGTGGGGCGGCGCAATATGGAGATCGTTGCCGATCTGC
TGGCCGCCGATCCGTCATTCGAGTTCTTCTCGCTGGTAGATTCGGCCGCGCTCGTCGACCAGCTTGGCGCGTTCTTCGAC
GCGCGTGGTCAGACGCTGCAGGTGCTGCTGGAACTGGGTGTGGAGGGCGGCCGGACCGGTGTGCGCGATGCCGCGCAGCA
GGCGGACGTGCTCGATGCGCTGTCGCGCTGGCCGAACGCCCTGAAGCTGGCTGGCGTCGAGATCTATGAAGGCGTGCTGC
AGCAGGAAGCCGATATCCGCGAGCTTCTGCAGCGCACGGTGGCCGTAACGCGCGAACTGGCCGCGGCGGGGCGTTTCGGA
CGCAGCCCGGTGGTGATGTCCGGCGCGGGCTCGGCATGGTACGACGTGGTGGCCGAAGAGTTCGCGCGCACCGATATCGG
GATGCCGATCGATATCGTGCTGCGTCCCGGGTGCTACCTGACGCACGACGTCGGCGTCTATCGAGCGGCGCAGGAACGCA
TCCTGGCGAGCAATCCGGTGGCGCAGAAGATGCGGGAGGGCCTGCTGCCCGCGCTGCAGCTCTGGGCCTATGTGCAGTCG
ATTCCTGAGCCAAACCGCGCCATCATCGGCATGGGCAAGCGGGATGCCGCGTTCGATGCGGGCATGCCGATACCAGCGCA
GATGTATCGTCCGGGTGCGGCCGGCCCTGTTGCCACGCCGGCGCGCTGGAAAGTGACGGGCATGATGGATCAGCACGCCT
ATCTGGAAATCGAGGCTGGCGATGACATCCGCGTCGGCGATATGATTGCCTTTGATATCTCGCATCCTTGCCTGACCTTC
GACAAGTGGCGCCATATTCCCGTGCTGGACAGCCAGTTCCAGGTCATCGACATTGTTCAGACGTTCTTCTGA

Upstream 100 bases:

>100_bases
ACCTCGGCCGACGAAGCATGTTACTTTCTAACAAGGATGAAATATCGTAGTTTCAAGGCTATCATTACGTCAATTGAATT
TTGACAGGGTGATGTCAGTC

Downstream 100 bases:

>100_bases
CCCCGGTGTCAGTCCCTGTGGCCAGACCGAATGGAATGAAGAGGAGATGAAGCCGAGATGAGTATCGATATCCTTGCCTA
TGGCGAACCGCTGATCGAGT

Product: putative enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MRETKYQTGMIDPLNKAMGRLDAPLTPSEAGQPGWRLLAEELSLPAAVLYEDRLTHNLQWMRNFMGAYGVQLAPHGKTTM
APKLFARQLAEGAWGITLATAHQTAAAAAHGVKRVLMANQLVGRRNMEIVADLLAADPSFEFFSLVDSAALVDQLGAFFD
ARGQTLQVLLELGVEGGRTGVRDAAQQADVLDALSRWPNALKLAGVEIYEGVLQQEADIRELLQRTVAVTRELAAAGRFG
RSPVVMSGAGSAWYDVVAEEFARTDIGMPIDIVLRPGCYLTHDVGVYRAAQERILASNPVAQKMREGLLPALQLWAYVQS
IPEPNRAIIGMGKRDAAFDAGMPIPAQMYRPGAAGPVATPARWKVTGMMDQHAYLEIEAGDDIRVGDMIAFDISHPCLTF
DKWRHIPVLDSQFQVIDIVQTFF

Sequences:

>Translated_423_residues
MRETKYQTGMIDPLNKAMGRLDAPLTPSEAGQPGWRLLAEELSLPAAVLYEDRLTHNLQWMRNFMGAYGVQLAPHGKTTM
APKLFARQLAEGAWGITLATAHQTAAAAAHGVKRVLMANQLVGRRNMEIVADLLAADPSFEFFSLVDSAALVDQLGAFFD
ARGQTLQVLLELGVEGGRTGVRDAAQQADVLDALSRWPNALKLAGVEIYEGVLQQEADIRELLQRTVAVTRELAAAGRFG
RSPVVMSGAGSAWYDVVAEEFARTDIGMPIDIVLRPGCYLTHDVGVYRAAQERILASNPVAQKMREGLLPALQLWAYVQS
IPEPNRAIIGMGKRDAAFDAGMPIPAQMYRPGAAGPVATPARWKVTGMMDQHAYLEIEAGDDIRVGDMIAFDISHPCLTF
DKWRHIPVLDSQFQVIDIVQTFF
>Mature_423_residues
MRETKYQTGMIDPLNKAMGRLDAPLTPSEAGQPGWRLLAEELSLPAAVLYEDRLTHNLQWMRNFMGAYGVQLAPHGKTTM
APKLFARQLAEGAWGITLATAHQTAAAAAHGVKRVLMANQLVGRRNMEIVADLLAADPSFEFFSLVDSAALVDQLGAFFD
ARGQTLQVLLELGVEGGRTGVRDAAQQADVLDALSRWPNALKLAGVEIYEGVLQQEADIRELLQRTVAVTRELAAAGRFG
RSPVVMSGAGSAWYDVVAEEFARTDIGMPIDIVLRPGCYLTHDVGVYRAAQERILASNPVAQKMREGLLPALQLWAYVQS
IPEPNRAIIGMGKRDAAFDAGMPIPAQMYRPGAAGPVATPARWKVTGMMDQHAYLEIEAGDDIRVGDMIAFDISHPCLTF
DKWRHIPVLDSQFQVIDIVQTFF

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 46264; Mature: 46264

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHC
>Mature Secondary Structure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HHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]