| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94313644
Identifier: 94313644
GI number: 94313644
Start: 1364641
End: 1365156
Strand: Reverse
Name: 94313644
Synonym: Rmet_4722
Alternate gene names: NA
Gene position: 1365156-1364641 (Counterclockwise)
Preceding gene: 94313645
Following gene: 291481538
Centisome position: 52.91
GC content: 63.76
Gene sequence:
>516_bases ATGAGGGGCGCCCACGGGTGGGTCCTGGCGGCAGTGACCGCGGCAACGATGCTGGGCGGTTGCGCGACGTATCCCGGCTA TGACAGTCCGTACGGATATGACCCCAACTATCCGCTGGGCGACCTTGGTTCTGTCTACGGTGGGTACCCGGGCTACGAAT ATGACTACGCGTATCCCTATTGGTACGGCTACCCGTACGCGTATGGCGGCGGTTATCCATACTGGCCCGCTTACTGGCCG GCGTACACTGGTGGCGTATTCTTCGGCAGCTTCTGGTATGGCTGCTGTCACACCTCTTACTACCACCGCTACGGATGGTA TGGGCATGGGTACCGTGGATACTACGGGCACGGCTGGTATGGGTATCGCGGTGGCTACTACGGCTACCGTGGATCGCCGG GCTATCCTGGGTATCGCGGGTACGCCGGCTACCAGGGCGCAGGTGGAATGCCGGGATGGGGGGGCGGTGGTAGGGGCGGA CGGAGCGGTGGTGGCCGCGGAGGCGGACATCGCTGA
Upstream 100 bases:
>100_bases ACGAGAATCGGAAGATTCCGAAATTTGGACTTCTCGATGCAGCTACTGTCTAAGTGACTGTCGGAAGTCAATTCCGACCG GGTATCGACAGGAGGTTGTG
Downstream 100 bases:
>100_bases CACGCATCACCAGCACTTTTCAAGGAGCCGATGCTATGAGCAAACTGGATTCCACCAAATCTCTCACACCTGCTTCAAGA AAGGCACGCGAGTCGCATGA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRGAHGWVLAAVTAATMLGGCATYPGYDSPYGYDPNYPLGDLGSVYGGYPGYEYDYAYPYWYGYPYAYGGGYPYWPAYWP AYTGGVFFGSFWYGCCHTSYYHRYGWYGHGYRGYYGHGWYGYRGGYYGYRGSPGYPGYRGYAGYQGAGGMPGWGGGGRGG RSGGGRGGGHR
Sequences:
>Translated_171_residues MRGAHGWVLAAVTAATMLGGCATYPGYDSPYGYDPNYPLGDLGSVYGGYPGYEYDYAYPYWYGYPYAYGGGYPYWPAYWP AYTGGVFFGSFWYGCCHTSYYHRYGWYGHGYRGYYGHGWYGYRGGYYGYRGSPGYPGYRGYAGYQGAGGMPGWGGGGRGG RSGGGRGGGHR >Mature_171_residues MRGAHGWVLAAVTAATMLGGCATYPGYDSPYGYDPNYPLGDLGSVYGGYPGYEYDYAYPYWYGYPYAYGGGYPYWPAYWP AYTGGVFFGSFWYGCCHTSYYHRYGWYGHGYRGYYGHGWYGYRGGYYGYRGSPGYPGYRGYAGYQGAGGMPGWGGGGRGG RSGGGRGGGHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18752; Mature: 18752
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGAHGWVLAAVTAATMLGGCATYPGYDSPYGYDPNYPLGDLGSVYGGYPGYEYDYAYPY CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCE WYGYPYAYGGGYPYWPAYWPAYTGGVFFGSFWYGCCHTSYYHRYGWYGHGYRGYYGHGWY ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE GYRGGYYGYRGSPGYPGYRGYAGYQGAGGMPGWGGGGRGGRSGGGRGGGHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRGAHGWVLAAVTAATMLGGCATYPGYDSPYGYDPNYPLGDLGSVYGGYPGYEYDYAYPY CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCE WYGYPYAYGGGYPYWPAYWPAYTGGVFFGSFWYGCCHTSYYHRYGWYGHGYRGYYGHGWY ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE GYRGGYYGYRGSPGYPGYRGYAGYQGAGGMPGWGGGGRGGRSGGGRGGGHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA