| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313606
Identifier: 94313606
GI number: 94313606
Start: 1313873
End: 1314709
Strand: Reverse
Name: 94313606
Synonym: Rmet_4684
Alternate gene names: NA
Gene position: 1314709-1313873 (Counterclockwise)
Preceding gene: 94313607
Following gene: 94313605
Centisome position: 50.96
GC content: 65.71
Gene sequence:
>837_bases ATGACAGCGACACCACGCGCGGGGCTTGGACTCAAGCCGCAACACTTCGAGCAGGCGCTGCAATGCGCCGAGCCGGGCCT GTGGTTCGAGGTCCACCCGGAGAACTACCTGATGGCCGGCGGTCCGCGCCTGGCGTGGCTGACGGCCATCAGGGAGCGCC ATCCGGTGGCACTGCACGGCGTGTCGCTGTCATTGGCGGGCGATGCCCCGCCGGACGAGGCGCATCTCGATCGGCTTCAC GCACTGTTGCGGCGGATCGAGCCGGTGCTGGTTTCCGAGCATCTGGCGTGGTCGACGCTGGACGGGCGCTACGTGCCGGA TCTATTGCCGGTGGCGCGGACCACGGCAAGACTGGCGAAAGTGGCGGCCAATATCTCCCGCGTTCAGGACCGCCTTGGAT GTGCCATCGCGCTGGAGAACCCGTCGCACTACCTGCGCATGGACGAGCACGACTGGAGCGAGACCGATTTTCTGGCCGAA CTGGTGCGGCGCACCGGTTGCGGGCTGCTGCTGGACATTAACAACGTTTACGTCAGCGCCCGAAACATGGGTTACGACGC GTGGGACTACCTGACCCGCGTGCCGGCCGAAGCCGTGCGGGAGATTCATCTGGCCGGACACAGCTTCGACGACGAGTTCG GCGCGTCACTGCTGATCGACTCGCACGATGCGCCGGTGGCGGAGGCCGTCTGGTCGCTATATCGCCGCTTCGTGGCGCGG GTAGGTGAGCGTCCGACGCTGATCGAACGGGACGACAACATTCCCGAATTCGCCGACTTGCTTGACGAGCGGGATCGCGC ACAGTCCATCCTGGACGCGGAGGTCGCCACATCATGA
Upstream 100 bases:
>100_bases TCCGTGCCCGTTGGTACCTGCGCGACGATCAAGACGCCGCACGGCATGGGCACGCTGAAGCCGATGTAAGCCGGATAGCA GCCCGTTGGAGACGTCTACC
Downstream 100 bases:
>100_bases ACGCCAACGGACATCACTTTCAGGACGATTTCCTGCGCGCCATTCTGGCGCCGCCGGGCATCGCGCCGCCGTGGACCCCA ATCACGCCGCTGACGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MTATPRAGLGLKPQHFEQALQCAEPGLWFEVHPENYLMAGGPRLAWLTAIRERHPVALHGVSLSLAGDAPPDEAHLDRLH ALLRRIEPVLVSEHLAWSTLDGRYVPDLLPVARTTARLAKVAANISRVQDRLGCAIALENPSHYLRMDEHDWSETDFLAE LVRRTGCGLLLDINNVYVSARNMGYDAWDYLTRVPAEAVREIHLAGHSFDDEFGASLLIDSHDAPVAEAVWSLYRRFVAR VGERPTLIERDDNIPEFADLLDERDRAQSILDAEVATS
Sequences:
>Translated_278_residues MTATPRAGLGLKPQHFEQALQCAEPGLWFEVHPENYLMAGGPRLAWLTAIRERHPVALHGVSLSLAGDAPPDEAHLDRLH ALLRRIEPVLVSEHLAWSTLDGRYVPDLLPVARTTARLAKVAANISRVQDRLGCAIALENPSHYLRMDEHDWSETDFLAE LVRRTGCGLLLDINNVYVSARNMGYDAWDYLTRVPAEAVREIHLAGHSFDDEFGASLLIDSHDAPVAEAVWSLYRRFVAR VGERPTLIERDDNIPEFADLLDERDRAQSILDAEVATS >Mature_277_residues TATPRAGLGLKPQHFEQALQCAEPGLWFEVHPENYLMAGGPRLAWLTAIRERHPVALHGVSLSLAGDAPPDEAHLDRLHA LLRRIEPVLVSEHLAWSTLDGRYVPDLLPVARTTARLAKVAANISRVQDRLGCAIALENPSHYLRMDEHDWSETDFLAEL VRRTGCGLLLDINNVYVSARNMGYDAWDYLTRVPAEAVREIHLAGHSFDDEFGASLLIDSHDAPVAEAVWSLYRRFVARV GERPTLIERDDNIPEFADLLDERDRAQSILDAEVATS
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 31062; Mature: 30931
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPRAGLGLKPQHFEQALQCAEPGLWFEVHPENYLMAGGPRLAWLTAIRERHPVALHG CCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEECCCHHHHHHHHHHCCCEEEEC VSLSLAGDAPPDEAHLDRLHALLRRIEPVLVSEHLAWSTLDGRYVPDLLPVARTTARLAK EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH VAANISRVQDRLGCAIALENPSHYLRMDEHDWSETDFLAELVRRTGCGLLLDINNVYVSA HHHHHHHHHHHHCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCEEEEE RNMGYDAWDYLTRVPAEAVREIHLAGHSFDDEFGASLLIDSHDAPVAEAVWSLYRRFVAR CCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH VGERPTLIERDDNIPEFADLLDERDRAQSILDAEVATS HCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TATPRAGLGLKPQHFEQALQCAEPGLWFEVHPENYLMAGGPRLAWLTAIRERHPVALHG CCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEECCCHHHHHHHHHHCCCEEEEC VSLSLAGDAPPDEAHLDRLHALLRRIEPVLVSEHLAWSTLDGRYVPDLLPVARTTARLAK EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH VAANISRVQDRLGCAIALENPSHYLRMDEHDWSETDFLAELVRRTGCGLLLDINNVYVSA HHHHHHHHHHHHCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCEEEEE RNMGYDAWDYLTRVPAEAVREIHLAGHSFDDEFGASLLIDSHDAPVAEAVWSLYRRFVAR CCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH VGERPTLIERDDNIPEFADLLDERDRAQSILDAEVATS HCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]