| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is oprC
Identifier: 94313529
GI number: 94313529
Start: 1232297
End: 1234471
Strand: Reverse
Name: oprC
Synonym: Rmet_4607
Alternate gene names: NA
Gene position: 1234471-1232297 (Counterclockwise)
Preceding gene: 94313530
Following gene: 94313527
Centisome position: 47.85
GC content: 64.28
Gene sequence:
>2175_bases ATGTCATCACGAGCGGGTGGGTGTCATTGCGCTGTTCAAATGCTTACCCCAAACAAAATCCAGCGTGCCTGCGCGCTGTC CCCGTTCGATCGCGATCGCTATTCGCATCGCGCATCGGTCCTGGTGCTGTCGCTCGTTGCCTGCGCACCCTTTGCCAGCC GTGCCGCTGAGCACACGGAACATGCCGAGCACACCAGCAACGACGCTGCGGCCGAAGTTGTCCTGCCGACTGTCGAGGTC TCCGCGAGTCCCCTCAATATCCCGATCGTGGTCGTGACGGACCCCAAGGCGCCGCGACAGCCTTTGCCCGCGAGCGACGG CGCCGATTACCTGAAAACCGTGCCCGGGTTCACCGCGATCCGCAATGGCGGCAGCAATGGCGACCCCGTCCTGCGCGGCA TGTTCGGGTCCAGACTCAATATGCTGGCCAACGGTGCGCCGAGCCTGGGCGCATGTCCCGGCCGGATGGACCCGCCCACC TCGTACATCGCCCCGGAGAGCTACGACAAGGTCACCGTGATCAAGGGCCCGCAGACCGTGCTCTACGGCCCAGGCGCATC GGCCGGCACTGTGCTGTTCGAGCGCGAGGCGCCACGTTTCGACAAACCGGGCGTGCACATGGATGCGAGTCTGGTGGGCG GATCGAATGGCCGCAATGACGAGAACCTCGAAGTCACCGCCGGCACCCCGGAAGTCTACGGGCGCCTGAATGCCAACAAG TCGTACGCCCAGGACTATCGCGACGGCAACGGCAATACCGTGCCTTCGGCCTGGAGCAAGTGGAATGCTGACGCGGCGGT GGGCATCACTCCCGATGCCAACACGCTCATCGAGCTCGCCGCCAGCACCGGTGACGGCAACGCCCGATACGCCGGGCGCG GCATGGACGGCGTGCGTTTCAAGCGCGACAGTTTCCAGTTGCGCTTCAAGAAGCAGAACATCGGCGAATTCCTTCGCCGC GTCGACGCCGAGGTGTATTACAGCGATGCCGACCATCGCATGGACAACTACACCTTGCGAACACCGCCTCCCGGCAGCAT GGCCATGGCTTCGGACGTGCGCCGCCGTACCGCAGGCGGTCGCATCGCCGCGACATTCGACCTCGGTGAGAACGTGCAAT GGGTGGCGGGCTTCGATGCGCAGTCGAATAACCTCGATACACGCTCGGCCATGGGCGTGCTGAGCCCGTCGTCGATGCCG TGGAATCCGTCGGCGTCGCTTTCGAACTATGGTCTCTTCAGCGAACTGACCTGGGAGATCAACGACGCACGGCGCGTGGT TGCCGGGGCGCGGCTGGATCGCTCGGGCGCCACGGACGAGCGCGCCACGGTCAGTGGGTCGATGGGCATGATGAAGATGA CGAATCCCACCGCGGATGAGACACGCAGTCAATTGCTGCCGAGCGGTTTCCTGCGCTACGAGCACACGCTCGCGGAAACG CCGATGACCTGGTACGCGGGACTCGGGCACACCGAGCGCTTTCCTGACTACTGGGAGCTGTTCTCGCCGAAACGTGGCCC GTCTGGGTCGACAAACGCGTTCACAGGCATTGAGCCCGAGAAGACCACCCAGCTCGACATCGGCGCCCGCTACCGCACCA AGACGCTCGACGCCTCGATTTCGGCGTACGCCGGCTACGTCAACAACTTCATCCTGTTCTCCTATGGCTCCGGCGCGACC GCGAACCTGTCGCAGGCCAGCAATGTCAACGCGCAGATCATGGGCGGTGAGATCAGCACGTTCTGGTTCCCCAGCGCGAG CTGGAAGCTGGGCGGGTCAGTCGCCTATGCCTGGGGCCGCAACGTGGACAGCGGGGCCCCGCTGCCGCAGATTCCGCCAC TCGAGATGCGTCTGAGCGCCGATTACTCGTGGCGCGAGTGGTCGGTTGGCGGTTTGTGGCGTGTCGTGGCGCCGCAGCGT CGCTATGCGCTGCACGAGGGGAATGTGGTCGGTCAGGATTTTGGGCCGAGCGCTGGCTTTGGCGTGGTCTCGGTGAATGC GCAGTACAACTTCAACAAGAGCGCGCAGTTGTCGATCGGCATCGACAACCTGTTCGACAAGGCCTACACCGAGCATCTGA ACCTCGCCGGCAACGCCGGCTTCGGCTACGCCGCCTCCACGCCAATCATGTCACCGGGACGGACGTTCTGGGGGCGGTTG CGCATCAAGATCTGA
Upstream 100 bases:
>100_bases CGGCACCAGCGCTACCTGCGCCGCCCATCGCGCGCGCCGCCTTTCAGCATCTGAACACGCCTAAACCGTCCTTCTGATTC TTATCACGCCCTCGCTCGCG
Downstream 100 bases:
>100_bases GGGCAGGGCGGCAAGAGTAGAAAGTGGGCGGAGAAGCGTGGCTTCCCGCCCACCAATGCCGCGCGACAGCGCCGACGGTT ATACCGCCTGCAGCGCCTGG
Product: TonB-dependent copper receptor
Products: NA
Alternate protein names: NB-Dependent Copper Receptor; NB Dependent Receptor; Outer Membrane Copper Receptor; NB-Dependent Receptor Protein; Outer Membrane Copper Receptor OprC; Outer Membrane Protein C; NB-Dependent Receptor Plug; Nb-Dependent Receptor; Outer Membrane Protein OprC; Outer Membrane Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor Protein; NB-Dependent Haemoglobin/Transferrin/Lactoferrin Receptor; NB-Dependent Receptor Plug Domain-Containing; NB-Dependent Copper Receptor Protein; Outer Membrane Protein OprC Complement; Iron Complex Outermembrane Recepter Protein; Outer Membrane Heme Receptor; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; N-B Dependent Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; Membrane Receptor Protein; Outer Membrane Receptor Family Transporter; NB-Dependent Receptor Domain Protein; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 724; Mature: 723
Protein sequence:
>724_residues MSSRAGGCHCAVQMLTPNKIQRACALSPFDRDRYSHRASVLVLSLVACAPFASRAAEHTEHAEHTSNDAAAEVVLPTVEV SASPLNIPIVVVTDPKAPRQPLPASDGADYLKTVPGFTAIRNGGSNGDPVLRGMFGSRLNMLANGAPSLGACPGRMDPPT SYIAPESYDKVTVIKGPQTVLYGPGASAGTVLFEREAPRFDKPGVHMDASLVGGSNGRNDENLEVTAGTPEVYGRLNANK SYAQDYRDGNGNTVPSAWSKWNADAAVGITPDANTLIELAASTGDGNARYAGRGMDGVRFKRDSFQLRFKKQNIGEFLRR VDAEVYYSDADHRMDNYTLRTPPPGSMAMASDVRRRTAGGRIAATFDLGENVQWVAGFDAQSNNLDTRSAMGVLSPSSMP WNPSASLSNYGLFSELTWEINDARRVVAGARLDRSGATDERATVSGSMGMMKMTNPTADETRSQLLPSGFLRYEHTLAET PMTWYAGLGHTERFPDYWELFSPKRGPSGSTNAFTGIEPEKTTQLDIGARYRTKTLDASISAYAGYVNNFILFSYGSGAT ANLSQASNVNAQIMGGEISTFWFPSASWKLGGSVAYAWGRNVDSGAPLPQIPPLEMRLSADYSWREWSVGGLWRVVAPQR RYALHEGNVVGQDFGPSAGFGVVSVNAQYNFNKSAQLSIGIDNLFDKAYTEHLNLAGNAGFGYAASTPIMSPGRTFWGRL RIKI
Sequences:
>Translated_724_residues MSSRAGGCHCAVQMLTPNKIQRACALSPFDRDRYSHRASVLVLSLVACAPFASRAAEHTEHAEHTSNDAAAEVVLPTVEV SASPLNIPIVVVTDPKAPRQPLPASDGADYLKTVPGFTAIRNGGSNGDPVLRGMFGSRLNMLANGAPSLGACPGRMDPPT SYIAPESYDKVTVIKGPQTVLYGPGASAGTVLFEREAPRFDKPGVHMDASLVGGSNGRNDENLEVTAGTPEVYGRLNANK SYAQDYRDGNGNTVPSAWSKWNADAAVGITPDANTLIELAASTGDGNARYAGRGMDGVRFKRDSFQLRFKKQNIGEFLRR VDAEVYYSDADHRMDNYTLRTPPPGSMAMASDVRRRTAGGRIAATFDLGENVQWVAGFDAQSNNLDTRSAMGVLSPSSMP WNPSASLSNYGLFSELTWEINDARRVVAGARLDRSGATDERATVSGSMGMMKMTNPTADETRSQLLPSGFLRYEHTLAET PMTWYAGLGHTERFPDYWELFSPKRGPSGSTNAFTGIEPEKTTQLDIGARYRTKTLDASISAYAGYVNNFILFSYGSGAT ANLSQASNVNAQIMGGEISTFWFPSASWKLGGSVAYAWGRNVDSGAPLPQIPPLEMRLSADYSWREWSVGGLWRVVAPQR RYALHEGNVVGQDFGPSAGFGVVSVNAQYNFNKSAQLSIGIDNLFDKAYTEHLNLAGNAGFGYAASTPIMSPGRTFWGRL RIKI >Mature_723_residues SSRAGGCHCAVQMLTPNKIQRACALSPFDRDRYSHRASVLVLSLVACAPFASRAAEHTEHAEHTSNDAAAEVVLPTVEVS ASPLNIPIVVVTDPKAPRQPLPASDGADYLKTVPGFTAIRNGGSNGDPVLRGMFGSRLNMLANGAPSLGACPGRMDPPTS YIAPESYDKVTVIKGPQTVLYGPGASAGTVLFEREAPRFDKPGVHMDASLVGGSNGRNDENLEVTAGTPEVYGRLNANKS YAQDYRDGNGNTVPSAWSKWNADAAVGITPDANTLIELAASTGDGNARYAGRGMDGVRFKRDSFQLRFKKQNIGEFLRRV DAEVYYSDADHRMDNYTLRTPPPGSMAMASDVRRRTAGGRIAATFDLGENVQWVAGFDAQSNNLDTRSAMGVLSPSSMPW NPSASLSNYGLFSELTWEINDARRVVAGARLDRSGATDERATVSGSMGMMKMTNPTADETRSQLLPSGFLRYEHTLAETP MTWYAGLGHTERFPDYWELFSPKRGPSGSTNAFTGIEPEKTTQLDIGARYRTKTLDASISAYAGYVNNFILFSYGSGATA NLSQASNVNAQIMGGEISTFWFPSASWKLGGSVAYAWGRNVDSGAPLPQIPPLEMRLSADYSWREWSVGGLWRVVAPQRR YALHEGNVVGQDFGPSAGFGVVSVNAQYNFNKSAQLSIGIDNLFDKAYTEHLNLAGNAGFGYAASTPIMSPGRTFWGRLR IKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78069; Mature: 77938
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRAGGCHCAVQMLTPNKIQRACALSPFDRDRYSHRASVLVLSLVACAPFASRAAEHTE CCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH HAEHTSNDAAAEVVLPTVEVSASPLNIPIVVVTDPKAPRQPLPASDGADYLKTVPGFTAI HHHHCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCHHEE RNGGSNGDPVLRGMFGSRLNMLANGAPSLGACPGRMDPPTSYIAPESYDKVTVIKGPQTV CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEE LYGPGASAGTVLFEREAPRFDKPGVHMDASLVGGSNGRNDENLEVTAGTPEVYGRLNANK EECCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCHHHEEEECCCH SYAQDYRDGNGNTVPSAWSKWNADAAVGITPDANTLIELAASTGDGNARYAGRGMDGVRF HHHHHHCCCCCCCCCCCHHCCCCCEEEEECCCCCCEEEEEECCCCCCCEEECCCCCCEEE KRDSFQLRFKKQNIGEFLRRVDAEVYYSDADHRMDNYTLRTPPPGSMAMASDVRRRTAGG ECCCEEEEEEHHHHHHHHHHHCCEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCC RIAATFDLGENVQWVAGFDAQSNNLDTRSAMGVLSPSSMPWNPSASLSNYGLFSELTWEI EEEEEEECCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEE NDARRVVAGARLDRSGATDERATVSGSMGMMKMTNPTADETRSQLLPSGFLRYEHTLAET CCHHHHHHCCEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHCC PMTWYAGLGHTERFPDYWELFSPKRGPSGSTNAFTGIEPEKTTQLDIGARYRTKTLDASI CCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCHH SAYAGYVNNFILFSYGSGATANLSQASNVNAQIMGGEISTFWFPSASWKLGGSVAYAWGR HHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCEEEEEECC NVDSGAPLPQIPPLEMRLSADYSWREWSVGGLWRVVAPQRRYALHEGNVVGQDFGPSAGF CCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCHHHEEECCCEECCCCCCCCCC GVVSVNAQYNFNKSAQLSIGIDNLFDKAYTEHLNLAGNAGFGYAASTPIMSPGRTFWGRL EEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE RIKI EEEC >Mature Secondary Structure SSRAGGCHCAVQMLTPNKIQRACALSPFDRDRYSHRASVLVLSLVACAPFASRAAEHTE CCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH HAEHTSNDAAAEVVLPTVEVSASPLNIPIVVVTDPKAPRQPLPASDGADYLKTVPGFTAI HHHHCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCHHEE RNGGSNGDPVLRGMFGSRLNMLANGAPSLGACPGRMDPPTSYIAPESYDKVTVIKGPQTV CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEE LYGPGASAGTVLFEREAPRFDKPGVHMDASLVGGSNGRNDENLEVTAGTPEVYGRLNANK EECCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCHHHEEEECCCH SYAQDYRDGNGNTVPSAWSKWNADAAVGITPDANTLIELAASTGDGNARYAGRGMDGVRF HHHHHHCCCCCCCCCCCHHCCCCCEEEEECCCCCCEEEEEECCCCCCCEEECCCCCCEEE KRDSFQLRFKKQNIGEFLRRVDAEVYYSDADHRMDNYTLRTPPPGSMAMASDVRRRTAGG ECCCEEEEEEHHHHHHHHHHHCCEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCC RIAATFDLGENVQWVAGFDAQSNNLDTRSAMGVLSPSSMPWNPSASLSNYGLFSELTWEI EEEEEEECCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEE NDARRVVAGARLDRSGATDERATVSGSMGMMKMTNPTADETRSQLLPSGFLRYEHTLAET CCHHHHHHCCEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHCC PMTWYAGLGHTERFPDYWELFSPKRGPSGSTNAFTGIEPEKTTQLDIGARYRTKTLDASI CCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCHH SAYAGYVNNFILFSYGSGATANLSQASNVNAQIMGGEISTFWFPSASWKLGGSVAYAWGR HHHHHHHCCEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCEEEEEECC NVDSGAPLPQIPPLEMRLSADYSWREWSVGGLWRVVAPQRRYALHEGNVVGQDFGPSAGF CCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCHHHEEECCCEECCCCCCCCCC GVVSVNAQYNFNKSAQLSIGIDNLFDKAYTEHLNLAGNAGFGYAASTPIMSPGRTFWGRL EEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE RIKI EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA