| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is arnT [H]
Identifier: 94313509
GI number: 94313509
Start: 1205867
End: 1207609
Strand: Direct
Name: arnT [H]
Synonym: Rmet_4587
Alternate gene names: 94313509
Gene position: 1205867-1207609 (Clockwise)
Preceding gene: 94313506
Following gene: 94313510
Centisome position: 46.74
GC content: 65.81
Gene sequence:
>1743_bases ATGCGTAGTTCCTCGCCCTCGCGTCACGACGGGCTGCCCCCGGGCATGATCGCCCCAGTGGTGCTGGTCGTCATCGCGGT ATTGCTGGTCTGGTTCGGCACGCTCGATGCCCGCCACCTGCTACGCCCGGACGAGGGCCGATACGCAGAAATCTCGCGCG AAATGTTCGCCACGGGCGACTGGGTGACGATTCGCTATAACGCACTCAAGTACTTCGAGAAGCCCCCCTTCCATATGTGG GTGACGACGATCGGCTACGAACTGTTCGGCGTCGGAGACTGGCAAGCCCGGCTCGCCGTGGCGCTGTCCGGCCTTGTTGG TCTCGTGGTCACCATGATGGCCGTAATCCGTTGGTATGGCGCGCGTGCCGGGCTGCTGGCCGGGCTGGCGTTGCTGGCCA TGCCGATGTGGAGCGTCACCGGCCATTTCAATTCGCTGGACATGACCCTCTCGGGTGCGCTGGCGTGCGTGCTGGCCTTC ATGCTGCTGGCCCAGCACCCCGATGCGTCGCCGGCGGCCCGCCGTGGCTGGATGCTGGCCTGCTGGGCGGCCATGGGGGT GGCGATCCTGACCAAGGGTCTGGTGGGCATCGCCCTGCCCGGCCTGGTGCTGGTGGTCTACACCCTCGTGACACGCAACC TTGCCCTGTGGGGCCGCCTGCACCTGGTGAGCGGCATCCTCGCCATGCTCGTGGTCACCGTGCCCTGGTTCTGGCTGATT TCCTCGCGCAACCCCGAGTTTCCGCATTTCTTCTTTATCCACGAGCACTGGGATCGCTATACCTCGACCGTGCATTCGCG CAAGGGATCGATCTGGTATTTCGTACCGCTGCTGCTGGCCGGGACGCTGCCCTGGCTGGGCCTGACCCCGCGCATGTGGA CCGCGGTGAGCGAGCGCGCTGGCGCGGTGCGCGGCATGGGCGCCAAGCCGTTCCAGCCCGCCCTGCTGGCATTCATCTGG TTCGCGGCGATCTTCGTGTTCTTCAGCCTGTCCGGCTCGAAGCTGCCCGGCTATATCGTGCCGGTGTTCCCGGCGCTGGC CATCCTGGTCGCCGTGGCGCTGGAACAGATCAACGAACGGTCGTGGCTGCGGCAGATCAATGCGGTCACGGTGCTGTCGG TGGCCGGCATCGTCGCTTCGCCGTTCGTCGCCACGCTCGGCAACGAGACCAACCCCAATGCCGTGTTCCGCGTCTTCGCC ATCTACGTTGGCGTGGCGTTTGCCGTACTTTTGATCGGAATGGTGCTGGCGCGCCGCCTGCTGCGCGCCTATGGTCTGCT GCCAAGCATCACCGCCTTCTCGCTCGCCTTCTTCCTGACCTGCACCATTGCCCTCATGGGCCACGAAGTGATGGGGCGCC GGGCATCAGGCGTCGACCTGGTGCCGGCCATCAAGGCCGTGCTCAAGGACGACATGCCGCTCTATGGCGTGGGTGTTCTG GATCACACGCTGCCGTTCTACCTGGGCCACACGCTGGTCATGGTGGCGGCCCCGGACGAACTCGAATTCGGCACCCAGCA GGAGCCGGACAAGTGGATTCCCACCATGGACGGCTTCATCGCCAAGTGGCGTGACGGCCAGCCGGCCCTCGGCATCATGT CTCCGGACACCTACGATAGTCTGGCGGCCAACCACCTGCCGATGTACGTGGTGGCTCGCGACGTGCGCCGCGTGGTAGTC AGCAATTTCCCGCCGCCGGCCGCGCCGGCACCGTCGCCCAAGGACTCCAGAACCGCGCCATGA
Upstream 100 bases:
>100_bases AAGCCTGTTGTCCACCAAGTCGGGTCTTGTCGCGTTGTGGGGAGTTCGCCACACGCCGGCCGTCGTATCGCGTCCGGCTT CCGGCCATTTCAGGAGATTT
Downstream 100 bases:
>100_bases CGCTATCGACCTTCGCCTTCATCTTTACCGGCGTGCTGCTCAACGCCTGCGCGCAGCTCCTGCTCAAGGCCGGTGTCAAC GCCGTGGGCGCGATCACGAT
Product: 4-amino-4-deoxy-L-arabinose transferase-like protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MRSSSPSRHDGLPPGMIAPVVLVVIAVLLVWFGTLDARHLLRPDEGRYAEISREMFATGDWVTIRYNALKYFEKPPFHMW VTTIGYELFGVGDWQARLAVALSGLVGLVVTMMAVIRWYGARAGLLAGLALLAMPMWSVTGHFNSLDMTLSGALACVLAF MLLAQHPDASPAARRGWMLACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRNLALWGRLHLVSGILAMLVVTVPWFWLI SSRNPEFPHFFFIHEHWDRYTSTVHSRKGSIWYFVPLLLAGTLPWLGLTPRMWTAVSERAGAVRGMGAKPFQPALLAFIW FAAIFVFFSLSGSKLPGYIVPVFPALAILVAVALEQINERSWLRQINAVTVLSVAGIVASPFVATLGNETNPNAVFRVFA IYVGVAFAVLLIGMVLARRLLRAYGLLPSITAFSLAFFLTCTIALMGHEVMGRRASGVDLVPAIKAVLKDDMPLYGVGVL DHTLPFYLGHTLVMVAAPDELEFGTQQEPDKWIPTMDGFIAKWRDGQPALGIMSPDTYDSLAANHLPMYVVARDVRRVVV SNFPPPAAPAPSPKDSRTAP
Sequences:
>Translated_580_residues MRSSSPSRHDGLPPGMIAPVVLVVIAVLLVWFGTLDARHLLRPDEGRYAEISREMFATGDWVTIRYNALKYFEKPPFHMW VTTIGYELFGVGDWQARLAVALSGLVGLVVTMMAVIRWYGARAGLLAGLALLAMPMWSVTGHFNSLDMTLSGALACVLAF MLLAQHPDASPAARRGWMLACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRNLALWGRLHLVSGILAMLVVTVPWFWLI SSRNPEFPHFFFIHEHWDRYTSTVHSRKGSIWYFVPLLLAGTLPWLGLTPRMWTAVSERAGAVRGMGAKPFQPALLAFIW FAAIFVFFSLSGSKLPGYIVPVFPALAILVAVALEQINERSWLRQINAVTVLSVAGIVASPFVATLGNETNPNAVFRVFA IYVGVAFAVLLIGMVLARRLLRAYGLLPSITAFSLAFFLTCTIALMGHEVMGRRASGVDLVPAIKAVLKDDMPLYGVGVL DHTLPFYLGHTLVMVAAPDELEFGTQQEPDKWIPTMDGFIAKWRDGQPALGIMSPDTYDSLAANHLPMYVVARDVRRVVV SNFPPPAAPAPSPKDSRTAP >Mature_580_residues MRSSSPSRHDGLPPGMIAPVVLVVIAVLLVWFGTLDARHLLRPDEGRYAEISREMFATGDWVTIRYNALKYFEKPPFHMW VTTIGYELFGVGDWQARLAVALSGLVGLVVTMMAVIRWYGARAGLLAGLALLAMPMWSVTGHFNSLDMTLSGALACVLAF MLLAQHPDASPAARRGWMLACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRNLALWGRLHLVSGILAMLVVTVPWFWLI SSRNPEFPHFFFIHEHWDRYTSTVHSRKGSIWYFVPLLLAGTLPWLGLTPRMWTAVSERAGAVRGMGAKPFQPALLAFIW FAAIFVFFSLSGSKLPGYIVPVFPALAILVAVALEQINERSWLRQINAVTVLSVAGIVASPFVATLGNETNPNAVFRVFA IYVGVAFAVLLIGMVLARRLLRAYGLLPSITAFSLAFFLTCTIALMGHEVMGRRASGVDLVPAIKAVLKDDMPLYGVGVL DHTLPFYLGHTLVMVAAPDELEFGTQQEPDKWIPTMDGFIAKWRDGQPALGIMSPDTYDSLAANHLPMYVVARDVRRVVV SNFPPPAAPAPSPKDSRTAP
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=375, Percent_Identity=30.9333333333333, Blast_Score=154, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 63472; Mature: 63472
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSSPSRHDGLPPGMIAPVVLVVIAVLLVWFGTLDARHLLRPDEGRYAEISREMFATGD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCC WVTIRYNALKYFEKPPFHMWVTTIGYELFGVGDWQARLAVALSGLVGLVVTMMAVIRWYG EEEEEEHHHHHHCCCCHHHHHHHHCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC ARAGLLAGLALLAMPMWSVTGHFNSLDMTLSGALACVLAFMLLAQHPDASPAARRGWMLA CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHH CWAAMGVAILTKGLVGIALPGLVLVVYTLVTRNLALWGRLHLVSGILAMLVVTVPWFWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE SSRNPEFPHFFFIHEHWDRYTSTVHSRKGSIWYFVPLLLAGTLPWLGLTPRMWTAVSERA CCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHC GAVRGMGAKPFQPALLAFIWFAAIFVFFSLSGSKLPGYIVPVFPALAILVAVALEQINER CHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SWLRQINAVTVLSVAGIVASPFVATLGNETNPNAVFRVFAIYVGVAFAVLLIGMVLARRL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRAYGLLPSITAFSLAFFLTCTIALMGHEVMGRRASGVDLVPAIKAVLKDDMPLYGVGVL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECHHH DHTLPFYLGHTLVMVAAPDELEFGTQQEPDKWIPTMDGFIAKWRDGQPALGIMSPDTYDS HHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCHHH LAANHLPMYVVARDVRRVVVSNFPPPAAPAPSPKDSRTAP HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRSSSPSRHDGLPPGMIAPVVLVVIAVLLVWFGTLDARHLLRPDEGRYAEISREMFATGD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHCCCC WVTIRYNALKYFEKPPFHMWVTTIGYELFGVGDWQARLAVALSGLVGLVVTMMAVIRWYG EEEEEEHHHHHHCCCCHHHHHHHHCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHC ARAGLLAGLALLAMPMWSVTGHFNSLDMTLSGALACVLAFMLLAQHPDASPAARRGWMLA CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHH CWAAMGVAILTKGLVGIALPGLVLVVYTLVTRNLALWGRLHLVSGILAMLVVTVPWFWLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE SSRNPEFPHFFFIHEHWDRYTSTVHSRKGSIWYFVPLLLAGTLPWLGLTPRMWTAVSERA CCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHC GAVRGMGAKPFQPALLAFIWFAAIFVFFSLSGSKLPGYIVPVFPALAILVAVALEQINER CHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SWLRQINAVTVLSVAGIVASPFVATLGNETNPNAVFRVFAIYVGVAFAVLLIGMVLARRL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRAYGLLPSITAFSLAFFLTCTIALMGHEVMGRRASGVDLVPAIKAVLKDDMPLYGVGVL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECHHH DHTLPFYLGHTLVMVAAPDELEFGTQQEPDKWIPTMDGFIAKWRDGQPALGIMSPDTYDS HHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCHHH LAANHLPMYVVARDVRRVVVSNFPPPAAPAPSPKDSRTAP HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA