Click here to switch to the map view.

The map label for this gene is 94313473

Identifier: 94313473

GI number: 94313473

Start: 1154134

End: 1154877

Strand: Direct

Name: 94313473

Synonym: Rmet_4548

Alternate gene names: NA

Gene position: 1154134-1154877 (Clockwise)

Preceding gene: 94313469

Following gene: 291481531

Centisome position: 44.73

GC content: 63.84

Gene sequence:

>744_bases
ATGAAGCTCAAGCAAGCGCGCACCATCATCGTCGACGAGCACAAGCCGCCTGCGCAAGGCAAGGCTGCCAAGCGTGGCAG
CCCTGGTGTGGAAGCGACAGACGACAATGGCGACGGCCTGACCGACACGGCAAGAAGGATCCTCGAGATCGCCGAACGGC
TTTTTGCCGAGCAGGGCGTGGAGCAGGTGGCACTACGGCAGATCGTGGTGGAAAGCGGCCAGAAGAACCGCTCCGCCTTG
CACTACCACTTCGGGTCACGCGAGGCCCTGGTGAGCCATCTGCTCAACCGCCGTCTGCACGAGATCAACCGGATCCGGAA
CGGCTATCTCGACGCGCTTGAGCAACGCGGGACGCCCATCGACATTCACGGCGTGGTGGATGCCACGATTCGCCCGCTGG
TCGACGTGGTGCTCCAGACGGACTGGGGCACCAACTACCTGCAGGTATTGGCACAGACCACGTTCAGCCCTGGTCTGCTA
AGCAAGGGCCTCGTGGATCGGACCGCGATGAGCGCGCTGTACCGCGTGCGGGAGCATATCTACCAGTTGTTTCCGAACGT
GCCGCGCGACGTGATGAAACTGCGCATGGTCTGGTTCATCGACACCGTGGTCTACGCGCTGGCCCATTGGGTGCGCGAGC
GCGGGAAACGCTCGCGCTCGGAACCGCCGATGGAGGAACTGATTGATTTCTGCGCGGCCGCGATCCAGGGGCCGACGCCC
CCCGGTTCCGCCCGAAAGCGCTAG

Upstream 100 bases:

>100_bases
ATTCGACACCCCGATAGATGTCGGACATCAGATTTTTCCGTATCCTTGCCGGGCTTTCACTCATCCACCGAGAAGCTCAG
GGAACGGCAGGACATTTCTG

Downstream 100 bases:

>100_bases
CCGGCCCACAGGGCCAGCCAGCCTCGCCCTCCCGCCGACTTCAGCCCGTCGCCCTTTCGCTACCCTGCGCAGCGCGTGCC
AGCACCGGCACCAGCGCCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKLKQARTIIVDEHKPPAQGKAAKRGSPGVEATDDNGDGLTDTARRILEIAERLFAEQGVEQVALRQIVVESGQKNRSAL
HYHFGSREALVSHLLNRRLHEINRIRNGYLDALEQRGTPIDIHGVVDATIRPLVDVVLQTDWGTNYLQVLAQTTFSPGLL
SKGLVDRTAMSALYRVREHIYQLFPNVPRDVMKLRMVWFIDTVVYALAHWVRERGKRSRSEPPMEELIDFCAAAIQGPTP
PGSARKR

Sequences:

>Translated_247_residues
MKLKQARTIIVDEHKPPAQGKAAKRGSPGVEATDDNGDGLTDTARRILEIAERLFAEQGVEQVALRQIVVESGQKNRSAL
HYHFGSREALVSHLLNRRLHEINRIRNGYLDALEQRGTPIDIHGVVDATIRPLVDVVLQTDWGTNYLQVLAQTTFSPGLL
SKGLVDRTAMSALYRVREHIYQLFPNVPRDVMKLRMVWFIDTVVYALAHWVRERGKRSRSEPPMEELIDFCAAAIQGPTP
PGSARKR
>Mature_247_residues
MKLKQARTIIVDEHKPPAQGKAAKRGSPGVEATDDNGDGLTDTARRILEIAERLFAEQGVEQVALRQIVVESGQKNRSAL
HYHFGSREALVSHLLNRRLHEINRIRNGYLDALEQRGTPIDIHGVVDATIRPLVDVVLQTDWGTNYLQVLAQTTFSPGLL
SKGLVDRTAMSALYRVREHIYQLFPNVPRDVMKLRMVWFIDTVVYALAHWVRERGKRSRSEPPMEELIDFCAAAIQGPTP
PGSARKR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27816; Mature: 27816

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKQARTIIVDEHKPPAQGKAAKRGSPGVEATDDNGDGLTDTARRILEIAERLFAEQGV
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EQVALRQIVVESGQKNRSALHYHFGSREALVSHLLNRRLHEINRIRNGYLDALEQRGTPI
HHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
DIHGVVDATIRPLVDVVLQTDWGTNYLQVLAQTTFSPGLLSKGLVDRTAMSALYRVREHI
EEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
YQLFPNVPRDVMKLRMVWFIDTVVYALAHWVRERGKRSRSEPPMEELIDFCAAAIQGPTP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
PGSARKR
CCCCCCC
>Mature Secondary Structure
MKLKQARTIIVDEHKPPAQGKAAKRGSPGVEATDDNGDGLTDTARRILEIAERLFAEQGV
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
EQVALRQIVVESGQKNRSALHYHFGSREALVSHLLNRRLHEINRIRNGYLDALEQRGTPI
HHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
DIHGVVDATIRPLVDVVLQTDWGTNYLQVLAQTTFSPGLLSKGLVDRTAMSALYRVREHI
EEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
YQLFPNVPRDVMKLRMVWFIDTVVYALAHWVRERGKRSRSEPPMEELIDFCAAAIQGPTP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
PGSARKR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA