| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313461
Identifier: 94313461
GI number: 94313461
Start: 1143203
End: 1144159
Strand: Reverse
Name: 94313461
Synonym: Rmet_4536
Alternate gene names: NA
Gene position: 1144159-1143203 (Counterclockwise)
Preceding gene: 94313463
Following gene: 94313458
Centisome position: 44.35
GC content: 61.44
Gene sequence:
>957_bases ATGAAGCGCGCGCAATCGGCCGTCCTGACTGCCGTGGCAGCGGGAGGGCTACTGGCTCCGCTGGCATGTCACGCCACGGA AGGCGCACTGGGTCGCCCCGTGACCGGCACGAGTGTGTCGCCCAATGTGGCCGTTATCCCGTCCGAGCCGGTCTGGATTG CAAATTTGCAACAGCTTTACATGGACGGATCGATCACTGGCGGCCGGGAAGTGCCGATCGCCGGCAAGACCTCGATCGGT CTCGACGCGAAGGTCGCCTTCACGCTGGCCACGCTGATGAAGGTCTGGGATACCGGCGGAGGGGCGTGGAACTTTGCCTC GAGCTTTACGCTGCCCTACGTCTGGATGTCGGTCCATACAACTGCCGGTATAGGCAATTTCTCGCGTGGGACATCGGATC GGGCCTCCAATCTGTACGACATGTACTTCAGCCCGATCATCGCGGGCTATCACTTCTCGAAGACCAGCCATATGGCGCTG AGCTTCAATGTGTGGGCACCCACGGGCCAGTACGACAAGAATGCGCTGGCTAACCCGAGCCTGAACAACTGGACCTTCGT GCCGCAGATTGCATTTACGCATCTGATGCCGGAATACGGGCTCGAATTCAATGCGGTGGGGGCTTTCCAGTTCTATACGC GGAACACCGCTACCGACTATCAGAATGCGCCGCTGTTCACGCTCGACGTGATGGGCGTGAAGAAATTCGGCAAGTGGGGC GCTGGCATCGTGATGGGCACCGTGCAGCAGTTGGGCAACGACAGCGGTCCGATTGCGGATCGCCTGAACGGATTCCGTGG GCGTGACTTCGCCATGGGCCCGATCGTGACCTACGACACCAAACTCGGCGGCAAGGCACCGCTGTCCCTCTCCCTGCGCT GGGTGCCGACCGTCGCCAGCAAGAACCGTCTGGACAGCACGGCGACGGTGATGGGGAGCGCGACGCTGGTGTTCTGA
Upstream 100 bases:
>100_bases TCGTGAGATTAGAAAGCTGAATTCGGACCCGGGAGGAATCTGAGACGATGCAGCTTCTGCGCCGGGAGGGGCGCATTGTC ATCGTCAAAAGGAAACAAGA
Downstream 100 bases:
>100_bases GGTCGCGGGTTGCCCTTGGATGAAGGGGCCCGCCTGGCAAGGTACTGGGTGCGTGATGGCACCGCGACTCGCGGTATCAT CGCGCCCTTTGTCGTTTACG
Product: meta-pathway of phenol degradation protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MKRAQSAVLTAVAAGGLLAPLACHATEGALGRPVTGTSVSPNVAVIPSEPVWIANLQQLYMDGSITGGREVPIAGKTSIG LDAKVAFTLATLMKVWDTGGGAWNFASSFTLPYVWMSVHTTAGIGNFSRGTSDRASNLYDMYFSPIIAGYHFSKTSHMAL SFNVWAPTGQYDKNALANPSLNNWTFVPQIAFTHLMPEYGLEFNAVGAFQFYTRNTATDYQNAPLFTLDVMGVKKFGKWG AGIVMGTVQQLGNDSGPIADRLNGFRGRDFAMGPIVTYDTKLGGKAPLSLSLRWVPTVASKNRLDSTATVMGSATLVF
Sequences:
>Translated_318_residues MKRAQSAVLTAVAAGGLLAPLACHATEGALGRPVTGTSVSPNVAVIPSEPVWIANLQQLYMDGSITGGREVPIAGKTSIG LDAKVAFTLATLMKVWDTGGGAWNFASSFTLPYVWMSVHTTAGIGNFSRGTSDRASNLYDMYFSPIIAGYHFSKTSHMAL SFNVWAPTGQYDKNALANPSLNNWTFVPQIAFTHLMPEYGLEFNAVGAFQFYTRNTATDYQNAPLFTLDVMGVKKFGKWG AGIVMGTVQQLGNDSGPIADRLNGFRGRDFAMGPIVTYDTKLGGKAPLSLSLRWVPTVASKNRLDSTATVMGSATLVF >Mature_318_residues MKRAQSAVLTAVAAGGLLAPLACHATEGALGRPVTGTSVSPNVAVIPSEPVWIANLQQLYMDGSITGGREVPIAGKTSIG LDAKVAFTLATLMKVWDTGGGAWNFASSFTLPYVWMSVHTTAGIGNFSRGTSDRASNLYDMYFSPIIAGYHFSKTSHMAL SFNVWAPTGQYDKNALANPSLNNWTFVPQIAFTHLMPEYGLEFNAVGAFQFYTRNTATDYQNAPLFTLDVMGVKKFGKWG AGIVMGTVQQLGNDSGPIADRLNGFRGRDFAMGPIVTYDTKLGGKAPLSLSLRWVPTVASKNRLDSTATVMGSATLVF
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33969; Mature: 33969
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRAQSAVLTAVAAGGLLAPLACHATEGALGRPVTGTSVSPNVAVIPSEPVWIANLQQLY CCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEHHHHHHHH MDGSITGGREVPIAGKTSIGLDAKVAFTLATLMKVWDTGGGAWNFASSFTLPYVWMSVHT CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEE TAGIGNFSRGTSDRASNLYDMYFSPIIAGYHFSKTSHMALSFNVWAPTGQYDKNALANPS CCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEECCCCEEEEEEEEECCCCCCCCCCCCCCC LNNWTFVPQIAFTHLMPEYGLEFNAVGAFQFYTRNTATDYQNAPLFTLDVMGVKKFGKWG CCCCEEHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCHHHCCCCC AGIVMGTVQQLGNDSGPIADRLNGFRGRDFAMGPIVTYDTKLGGKAPLSLSLRWVPTVAS CHHHHHHHHHHCCCCCCHHHHHCCCCCCCEECCCEEEEECCCCCCCCEEEEEEEEECCCC KNRLDSTATVMGSATLVF CCCCCCHHEEECCEEEEC >Mature Secondary Structure MKRAQSAVLTAVAAGGLLAPLACHATEGALGRPVTGTSVSPNVAVIPSEPVWIANLQQLY CCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEHHHHHHHH MDGSITGGREVPIAGKTSIGLDAKVAFTLATLMKVWDTGGGAWNFASSFTLPYVWMSVHT CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEE TAGIGNFSRGTSDRASNLYDMYFSPIIAGYHFSKTSHMALSFNVWAPTGQYDKNALANPS CCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEECCCCEEEEEEEEECCCCCCCCCCCCCCC LNNWTFVPQIAFTHLMPEYGLEFNAVGAFQFYTRNTATDYQNAPLFTLDVMGVKKFGKWG CCCCEEHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCHHHCCCCC AGIVMGTVQQLGNDSGPIADRLNGFRGRDFAMGPIVTYDTKLGGKAPLSLSLRWVPTVAS CHHHHHHHHHHCCCCCCHHHHHCCCCCCCEECCCEEEEECCCCCCCCEEEEEEEEECCCC KNRLDSTATVMGSATLVF CCCCCCHHEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA