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The map label for this gene is 94313456

Identifier: 94313456

GI number: 94313456

Start: 1138228

End: 1139823

Strand: Reverse

Name: 94313456

Synonym: Rmet_4531

Alternate gene names: NA

Gene position: 1139823-1138228 (Counterclockwise)

Preceding gene: 94313457

Following gene: 94313455

Centisome position: 44.18

GC content: 67.92

Gene sequence:

>1596_bases
ATGAGCGCGTACTTCGAGGCTCTGGCCGAATTCCATTTTCTGCGCCCCTGGTGGCTGCTGGTGCTGCTGGCGGCGATCTG
GCTGCCCTGGGCCGTGCGGCGCCGTGGCGATATTCGCCGACGCTGGCGGGGTGTCATCGCGCCCCATCTGCTCAATGCGC
TGGTGGTTGGAGAGACCCGCGAGCGCGCGCTGCGCCCGGTACATCTGTCGGCCTTGCTGCTGGCATTGGGCGCCATCGCG
CTGGCGGGGCCGACCTGGGAGCGCGAACGGCCGCCGTTTCCGTCAGACAAGGCACCGCTGGTCATTGCCGTCGACCTGTC
GCCGACGATGGACGCCATCGACGTGACCCCGACCCGGCTCGAGCGAGCCAAACTCAAGATCAAGGCATTGCTGGCCCGGC
GCGACGGCGGGCGCACGGCAATCTATGCGTATGCAGGCTCGACCCATCTGGTACTGCCGCTGACCGATGACCCGACGCTG
CTGCAGACGTTCGCCGATGCGCTGCAGACCCGCATCATGCCGGTGCCCGGCAAGGACACCGTGCTGGCCGTGCGGACCAT
CGACGCAGCGCTGAAGAAGGAGACCGTTCCCGGAACGATCCTGTTGCTGACCGATGGCGTGGAGCCTGCGGCGGTCGAGC
CGCTTCATGCCTACGCCCGCTCGGCACGGACGCAAGTAGTGGTGTTGGCCATCGGGACAGCGGATGGCGGTCCGCTGCGC
GGTCGCGATGGCACCGCGCCGGGGCTGGACTCAGCCACGCTTCACGCGCTGCGTGCGGCGGACATCGACGTTGCGACGCT
GACCCCCGATGGCGATGCCGACGTGGCGTGGGTGCAGCGCCATGTGCGGCAGCACGTGGAACAGGCCGCATCGCCCGACA
CGGTGCGCTGGCACGACGTGGGCTGGCCCCTGACGATTCCGATCGCGCTGCTGGCGCTGCTGTGGTTCCGCAAGGGCTGG
ACGATCCGCTGGATCGTCGGCATCGGCGCGGCCGTGGTGCTGGCTGCGCCGCAGGCCGATCTGCGGGCGCAATCCACCAC
CGCCCCGCGAGCATGGCGCATGGCCGATCTCTGGCTCACGCACGACCAGCAGGGGCGGCGGGCGTTCGAACAGGGCAAGT
CCGCGGAGGCCGCGACGCAATTCGACGATCCGATGTGGCGCGGCGTGTCGTGGTACCGCGCAGGCAAGTTTGCCGAGGCC
GCGCGCGAGTTCGAGCACATCAGCAGTCCGGACGGGCATTTCAATCTGGGTAACGCGCTGGCGAAGCAGGGCAAGTATCA
GGACGCCATCCCGCAGTACCGGCTGGTACTGCAGCAGCGGCCCGGCTGGGCGCCAGCGCAGCGGAACCTGGCGCTGATGC
AGGAGTTGATCGAGCGCCAGAAGCAGAACGAGAAGCACGACGAAGAGGCGCCAGACATCAAGCCTGATCAGATCCAGTAC
GACGCCTCGACGCCACCGCCCCCTCCCGGCGGTGACAAGATGCAGAAAGGCCTCGCGCAGCAAAACGCGGAGATGTGGAT
GCGCGCGATTCAGACGTCCCCAACGGAACTGCTGGCGCGCAAGTTCGCGCTGCAGAGACAACAGGGGAAGCCATGA

Upstream 100 bases:

>100_bases
GGCCGCTTGGCGCCGCCGTGTTGCTGATGCTGTGCTACCAGTTGGCGATGGCGCTCTACGCGCGCTGGCTGGCGCGGGCG
GCTGCGTTGGAATCGACGGC

Downstream 100 bases:

>100_bases
TCGCGCGCCTGCTTTCCCTGATCGCGTTCTGTATGGCGGCACTGGCCCATGCGGCCGAGCCGGCGCCGATCGTTCGCGTC
GAGGTTGGCGGCAACGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Von Willebrand Factor Type A; Transmembrane Protein; TPR Repeat; TPR Domain Protein In Aerotolerance Operon; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; Transmembrane TPR Repeat-Containing Protein; Von Willebrand Factor Type A Domain-Containing Protein; Ssl1 Domain Protein; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MSAYFEALAEFHFLRPWWLLVLLAAIWLPWAVRRRGDIRRRWRGVIAPHLLNALVVGETRERALRPVHLSALLLALGAIA
LAGPTWERERPPFPSDKAPLVIAVDLSPTMDAIDVTPTRLERAKLKIKALLARRDGGRTAIYAYAGSTHLVLPLTDDPTL
LQTFADALQTRIMPVPGKDTVLAVRTIDAALKKETVPGTILLLTDGVEPAAVEPLHAYARSARTQVVVLAIGTADGGPLR
GRDGTAPGLDSATLHALRAADIDVATLTPDGDADVAWVQRHVRQHVEQAASPDTVRWHDVGWPLTIPIALLALLWFRKGW
TIRWIVGIGAAVVLAAPQADLRAQSTTAPRAWRMADLWLTHDQQGRRAFEQGKSAEAATQFDDPMWRGVSWYRAGKFAEA
AREFEHISSPDGHFNLGNALAKQGKYQDAIPQYRLVLQQRPGWAPAQRNLALMQELIERQKQNEKHDEEAPDIKPDQIQY
DASTPPPPPGGDKMQKGLAQQNAEMWMRAIQTSPTELLARKFALQRQQGKP

Sequences:

>Translated_531_residues
MSAYFEALAEFHFLRPWWLLVLLAAIWLPWAVRRRGDIRRRWRGVIAPHLLNALVVGETRERALRPVHLSALLLALGAIA
LAGPTWERERPPFPSDKAPLVIAVDLSPTMDAIDVTPTRLERAKLKIKALLARRDGGRTAIYAYAGSTHLVLPLTDDPTL
LQTFADALQTRIMPVPGKDTVLAVRTIDAALKKETVPGTILLLTDGVEPAAVEPLHAYARSARTQVVVLAIGTADGGPLR
GRDGTAPGLDSATLHALRAADIDVATLTPDGDADVAWVQRHVRQHVEQAASPDTVRWHDVGWPLTIPIALLALLWFRKGW
TIRWIVGIGAAVVLAAPQADLRAQSTTAPRAWRMADLWLTHDQQGRRAFEQGKSAEAATQFDDPMWRGVSWYRAGKFAEA
AREFEHISSPDGHFNLGNALAKQGKYQDAIPQYRLVLQQRPGWAPAQRNLALMQELIERQKQNEKHDEEAPDIKPDQIQY
DASTPPPPPGGDKMQKGLAQQNAEMWMRAIQTSPTELLARKFALQRQQGKP
>Mature_530_residues
SAYFEALAEFHFLRPWWLLVLLAAIWLPWAVRRRGDIRRRWRGVIAPHLLNALVVGETRERALRPVHLSALLLALGAIAL
AGPTWERERPPFPSDKAPLVIAVDLSPTMDAIDVTPTRLERAKLKIKALLARRDGGRTAIYAYAGSTHLVLPLTDDPTLL
QTFADALQTRIMPVPGKDTVLAVRTIDAALKKETVPGTILLLTDGVEPAAVEPLHAYARSARTQVVVLAIGTADGGPLRG
RDGTAPGLDSATLHALRAADIDVATLTPDGDADVAWVQRHVRQHVEQAASPDTVRWHDVGWPLTIPIALLALLWFRKGWT
IRWIVGIGAAVVLAAPQADLRAQSTTAPRAWRMADLWLTHDQQGRRAFEQGKSAEAATQFDDPMWRGVSWYRAGKFAEAA
REFEHISSPDGHFNLGNALAKQGKYQDAIPQYRLVLQQRPGWAPAQRNLALMQELIERQKQNEKHDEEAPDIKPDQIQYD
ASTPPPPPGGDKMQKGLAQQNAEMWMRAIQTSPTELLARKFALQRQQGKP

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58811; Mature: 58680

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYFEALAEFHFLRPWWLLVLLAAIWLPWAVRRRGDIRRRWRGVIAPHLLNALVVGETR
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ERALRPVHLSALLLALGAIALAGPTWERERPPFPSDKAPLVIAVDLSPTMDAIDVTPTRL
HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHH
ERAKLKIKALLARRDGGRTAIYAYAGSTHLVLPLTDDPTLLQTFADALQTRIMPVPGKDT
HHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHCEECCCCCCC
VLAVRTIDAALKKETVPGTILLLTDGVEPAAVEPLHAYARSARTQVVVLAIGTADGGPLR
EEEEEHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCC
GRDGTAPGLDSATLHALRAADIDVATLTPDGDADVAWVQRHVRQHVEQAASPDTVRWHDV
CCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC
GWPLTIPIALLALLWFRKGWTIRWIVGIGAAVVLAAPQADLRAQSTTAPRAWRMADLWLT
CCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCCHHEEEHEEEC
HDQQGRRAFEQGKSAEAATQFDDPMWRGVSWYRAGKFAEAAREFEHISSPDGHFNLGNAL
CCHHHHHHHHCCCCCCHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
AKQGKYQDAIPQYRLVLQQRPGWAPAQRNLALMQELIERQKQNEKHDEEAPDIKPDQIQY
HHCCCCHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
DASTPPPPPGGDKMQKGLAQQNAEMWMRAIQTSPTELLARKFALQRQQGKP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAYFEALAEFHFLRPWWLLVLLAAIWLPWAVRRRGDIRRRWRGVIAPHLLNALVVGETR
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ERALRPVHLSALLLALGAIALAGPTWERERPPFPSDKAPLVIAVDLSPTMDAIDVTPTRL
HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHH
ERAKLKIKALLARRDGGRTAIYAYAGSTHLVLPLTDDPTLLQTFADALQTRIMPVPGKDT
HHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHCEECCCCCCC
VLAVRTIDAALKKETVPGTILLLTDGVEPAAVEPLHAYARSARTQVVVLAIGTADGGPLR
EEEEEHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCC
GRDGTAPGLDSATLHALRAADIDVATLTPDGDADVAWVQRHVRQHVEQAASPDTVRWHDV
CCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC
GWPLTIPIALLALLWFRKGWTIRWIVGIGAAVVLAAPQADLRAQSTTAPRAWRMADLWLT
CCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCCHHEEEHEEEC
HDQQGRRAFEQGKSAEAATQFDDPMWRGVSWYRAGKFAEAAREFEHISSPDGHFNLGNAL
CCHHHHHHHHCCCCCCHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
AKQGKYQDAIPQYRLVLQQRPGWAPAQRNLALMQELIERQKQNEKHDEEAPDIKPDQIQY
HHCCCCHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
DASTPPPPPGGDKMQKGLAQQNAEMWMRAIQTSPTELLARKFALQRQQGKP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA