| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is uspA14
Identifier: 94313445
GI number: 94313445
Start: 1125064
End: 1125888
Strand: Reverse
Name: uspA14
Synonym: Rmet_4520
Alternate gene names: NA
Gene position: 1125888-1125064 (Counterclockwise)
Preceding gene: 94313447
Following gene: 94313444
Centisome position: 43.64
GC content: 68.48
Gene sequence:
>825_bases ATGGATTTCAAGACCATTCTCGTCGATCTTGCCGCTGATCCGGCGCGCGATGCGCGTCTGGATGCCGCGCTGACGCTGGC GTCGCTGTTCACCGCCCGGGTCGTCGGACTGACCGCCACTGGCACCTTGCTGGATCCATTCCGGAGCGCCGGCGAGGAGA CCGCGCGTTATCAGCAGATGCGCGCCGACATGCTGCGCAACCTGAAACAGGCCGATGCCGCTGCGCTCGATGCGGCAGTG GCGCGACGTGGGCGGGGCATCGAGATTTCACACGTGGTGGTCGAGCAGGAGGCGGGCTGGGCGCTGACCTCGCGCGGTGT CAGCAGCGATCTGATTCTGCCGGCGCCGCCGTCGCTGGCGCAAGATACGCCGGCGCTGATGGCCACTTCCGCCGAGTATG TGCTGCTGAACTCTGGCCGTCCGATTCTGGTGATACCACCTGGTGGCAGCCTGGTGCCGGGCGGCACCGTCGTGGTGGCC TGGGACGGGCGGCGCGAAGCCGCGCGCGCTATGAGAGATGCGTTGCCGCTGCTGGCACTGGCATCGCGTGTGATCCTGCA GGTGGTGCTCAGCGGCGCGGGGCCGAACGAGCATGGCGCGGCCGAGGCCGTGCGCTGGCTGGCCGATCACGGCGTCAGCG CTTCGCTGCGTATCGACGAGGCCGCGTCGCCAGCTGACAGCCTGATGCGCGTGACGCGCAACGAGGCAGCCGATCTGCTG GTGACCGGCGGCTACGGCCACTCACGGCTCGGCGAACTCGTGATGGGCGGAACCACGCGCACGCTGCTGCGCAACGCACC GGTGCCACTGCTGATGTCGCATTGA
Upstream 100 bases:
>100_bases TGTATTTGACTTGAGGCAAGCGCGGAGCATCTTTGGCGATTAAAGTGCACAAGACGGTATCCATTCTTGCCGCCCGATCG CCCCCTTGCCTGGAGCCCCC
Downstream 100 bases:
>100_bases AGCGCGTGGTACGTACTGTTTTGCCATCGTTTCAAAGCCAGTGAGCGGCTACGGCAATACTGACAACACCGCTACTGACG ACGCCAACACCAACATCACA
Product: Universal stress protein UspA family UspA14
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein; Universal Stress UspA Protein; Universal Stress Family Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Family; Uspa Domain-Containing Protein; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MDFKTILVDLAADPARDARLDAALTLASLFTARVVGLTATGTLLDPFRSAGEETARYQQMRADMLRNLKQADAAALDAAV ARRGRGIEISHVVVEQEAGWALTSRGVSSDLILPAPPSLAQDTPALMATSAEYVLLNSGRPILVIPPGGSLVPGGTVVVA WDGRREAARAMRDALPLLALASRVILQVVLSGAGPNEHGAAEAVRWLADHGVSASLRIDEAASPADSLMRVTRNEAADLL VTGGYGHSRLGELVMGGTTRTLLRNAPVPLLMSH
Sequences:
>Translated_274_residues MDFKTILVDLAADPARDARLDAALTLASLFTARVVGLTATGTLLDPFRSAGEETARYQQMRADMLRNLKQADAAALDAAV ARRGRGIEISHVVVEQEAGWALTSRGVSSDLILPAPPSLAQDTPALMATSAEYVLLNSGRPILVIPPGGSLVPGGTVVVA WDGRREAARAMRDALPLLALASRVILQVVLSGAGPNEHGAAEAVRWLADHGVSASLRIDEAASPADSLMRVTRNEAADLL VTGGYGHSRLGELVMGGTTRTLLRNAPVPLLMSH >Mature_274_residues MDFKTILVDLAADPARDARLDAALTLASLFTARVVGLTATGTLLDPFRSAGEETARYQQMRADMLRNLKQADAAALDAAV ARRGRGIEISHVVVEQEAGWALTSRGVSSDLILPAPPSLAQDTPALMATSAEYVLLNSGRPILVIPPGGSLVPGGTVVVA WDGRREAARAMRDALPLLALASRVILQVVLSGAGPNEHGAAEAVRWLADHGVSASLRIDEAASPADSLMRVTRNEAADLL VTGGYGHSRLGELVMGGTTRTLLRNAPVPLLMSH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28731; Mature: 28731
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFKTILVDLAADPARDARLDAALTLASLFTARVVGLTATGTLLDPFRSAGEETARYQQM CCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHH RADMLRNLKQADAAALDAAVARRGRGIEISHVVVEQEAGWALTSRGVSSDLILPAPPSLA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEECCCCCCCEEECCCCCCC QDTPALMATSAEYVLLNSGRPILVIPPGGSLVPGGTVVVAWDGRREAARAMRDALPLLAL CCCCHHHCCCCCEEEEECCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH ASRVILQVVLSGAGPNEHGAAEAVRWLADHGVSASLRIDEAASPADSLMRVTRNEAADLL HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEE VTGGYGHSRLGELVMGGTTRTLLRNAPVPLLMSH EECCCCHHHHHHHHCCCCHHHHHHCCCCCEEECC >Mature Secondary Structure MDFKTILVDLAADPARDARLDAALTLASLFTARVVGLTATGTLLDPFRSAGEETARYQQM CCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHH RADMLRNLKQADAAALDAAVARRGRGIEISHVVVEQEAGWALTSRGVSSDLILPAPPSLA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEECCCCCCCEEECCCCCCC QDTPALMATSAEYVLLNSGRPILVIPPGGSLVPGGTVVVAWDGRREAARAMRDALPLLAL CCCCHHHCCCCCEEEEECCCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH ASRVILQVVLSGAGPNEHGAAEAVRWLADHGVSASLRIDEAASPADSLMRVTRNEAADLL HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEE VTGGYGHSRLGELVMGGTTRTLLRNAPVPLLMSH EECCCCHHHHHHHHCCCCHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA