| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is zot
Identifier: 94313414
GI number: 94313414
Start: 1089030
End: 1090106
Strand: Reverse
Name: zot
Synonym: Rmet_4489
Alternate gene names: NA
Gene position: 1090106-1089030 (Counterclockwise)
Preceding gene: 94313415
Following gene: 94313413
Centisome position: 42.25
GC content: 58.22
Gene sequence:
>1077_bases ATGAGCGATTACGCTCTGACAGGCAAGAAAGGCACCGGCAAGAGTTCCGGCGCGGTGCGACAGATTCAAGCTCGGCTGCG CGCTGGTCAACGTGTCGCAACGAATCTGAATATCCACATGGATCACCTTATGCCCGCTCACTCGCGGGCATTTGTCATTC GGCTACGCGACAAGCCTAGTGCCCACGATCTGTTCTCGCTCGGCTCGGGCAATCCGAAGATCAAGTTCGATCCCATCGTT GATACGGACCCCAAGAGCAAGACCTATGGCCAGTGCATCGGCACGACCGATCCGCAGATTCTTGACGGCTTTGATGAGAA CGAAAACGGGCTGCTGGTGCTGGATGAAATGGGAACGTGGCTGAACTCGCGTTCGTTTCAGGATGCGTCACGCGCTCCGG TGCTTGACTGGCTCGCGCACGGTCGAAAGTTCGGCTGGGATGTGTTCTACCTGATGCAGCACATCAATCAGGTGGACAAG CAATTGCGCGAGTCCTTCATTGAGTACTGCGTGCGCTTCCATCGCTTGGACAAGATCAAGATTCCCGGTGTGTCTGCGGC GACGCGGCTTATCACGGCGGGGCAGTTCAAGGGGCAGTTTCCCCGCTTCCATATCGGTGTGATGCGCCTTGGTTGCGATC CCGCGGGGATGGTTGCTGATCGATGGGTGTTCCGCGGCGGGAACATACACAAGGCGTACGACACCACGCAGGTCTTTCAG GAATCCTATCCGCATGGCACGTTCTGCTATCTCTCGCACTGGCACCTTGAGGGCTGGAAACATCCTGAGGTGGTTCCTAT CGGCTGGCGTGCGCTCAACTGGATGCGCAAGTTCTGGCAGCCTTCGGTTGGCTCGTGGTCCATCAAAGATCGGCAATTGG TTGCGGCGGTGTACGCCCGTGAGAAAAGCCCACAGAAGCGTCAAAAGCTGTTTGAGGTACTCGCACGTCAACAGGCGCAA ATGAATCGCGCTGGGGCGCGTCTCGTGGCTGCCGGTGGCTCTCTGGCCCCTACCCTTCCCTCTCTCAAAGATCAAATGGA GGTGGTGCGGCGGAGCCTCAAGCGTGGGGCGGCGTGA
Upstream 100 bases:
>100_bases CATGGTGTGTCCCGTATCAAACGCTCGGCGGCGGGCTGTTGCTGCTGAGCCTGTTCCTGATTGCTGTCGGCGTGCTGCTC GCGTTCTCAAAGGGGGAGTG
Downstream 100 bases:
>100_bases CGGGTGCCGGCCGCAGGCCGGCGCGCGGCGCGGCGGCGCGCGCTATTCATATCAATAACACATAAGAAAACACACACCAC CGGGGTATAGCGTAGCCCCA
Product: phage head/capsid assembly, phage maturation protein
Products: NA
Alternate protein names: IKe Filamentous Prophage; Gene I Protein; Phage Head/Capsid Assembly Protein
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSDYALTGKKGTGKSSGAVRQIQARLRAGQRVATNLNIHMDHLMPAHSRAFVIRLRDKPSAHDLFSLGSGNPKIKFDPIV DTDPKSKTYGQCIGTTDPQILDGFDENENGLLVLDEMGTWLNSRSFQDASRAPVLDWLAHGRKFGWDVFYLMQHINQVDK QLRESFIEYCVRFHRLDKIKIPGVSAATRLITAGQFKGQFPRFHIGVMRLGCDPAGMVADRWVFRGGNIHKAYDTTQVFQ ESYPHGTFCYLSHWHLEGWKHPEVVPIGWRALNWMRKFWQPSVGSWSIKDRQLVAAVYAREKSPQKRQKLFEVLARQQAQ MNRAGARLVAAGGSLAPTLPSLKDQMEVVRRSLKRGAA
Sequences:
>Translated_358_residues MSDYALTGKKGTGKSSGAVRQIQARLRAGQRVATNLNIHMDHLMPAHSRAFVIRLRDKPSAHDLFSLGSGNPKIKFDPIV DTDPKSKTYGQCIGTTDPQILDGFDENENGLLVLDEMGTWLNSRSFQDASRAPVLDWLAHGRKFGWDVFYLMQHINQVDK QLRESFIEYCVRFHRLDKIKIPGVSAATRLITAGQFKGQFPRFHIGVMRLGCDPAGMVADRWVFRGGNIHKAYDTTQVFQ ESYPHGTFCYLSHWHLEGWKHPEVVPIGWRALNWMRKFWQPSVGSWSIKDRQLVAAVYAREKSPQKRQKLFEVLARQQAQ MNRAGARLVAAGGSLAPTLPSLKDQMEVVRRSLKRGAA >Mature_357_residues SDYALTGKKGTGKSSGAVRQIQARLRAGQRVATNLNIHMDHLMPAHSRAFVIRLRDKPSAHDLFSLGSGNPKIKFDPIVD TDPKSKTYGQCIGTTDPQILDGFDENENGLLVLDEMGTWLNSRSFQDASRAPVLDWLAHGRKFGWDVFYLMQHINQVDKQ LRESFIEYCVRFHRLDKIKIPGVSAATRLITAGQFKGQFPRFHIGVMRLGCDPAGMVADRWVFRGGNIHKAYDTTQVFQE SYPHGTFCYLSHWHLEGWKHPEVVPIGWRALNWMRKFWQPSVGSWSIKDRQLVAAVYAREKSPQKRQKLFEVLARQQAQM NRAGARLVAAGGSLAPTLPSLKDQMEVVRRSLKRGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40525; Mature: 40394
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYALTGKKGTGKSSGAVRQIQARLRAGQRVATNLNIHMDHLMPAHSRAFVIRLRDKPS CCCCEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECEEEHHHCCCCCCCEEEEEECCCCC AHDLFSLGSGNPKIKFDPIVDTDPKSKTYGQCIGTTDPQILDGFDENENGLLVLDEMGTW HHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCH LNSRSFQDASRAPVLDWLAHGRKFGWDVFYLMQHINQVDKQLRESFIEYCVRFHRLDKIK HCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IPGVSAATRLITAGQFKGQFPRFHIGVMRLGCDPAGMVADRWVFRGGNIHKAYDTTQVFQ CCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHEECCCCEECHHHHHHHHH ESYPHGTFCYLSHWHLEGWKHPEVVPIGWRALNWMRKFWQPSVGSWSIKDRQLVAAVYAR HCCCCCEEEEEEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH EKSPQKRQKLFEVLARQQAQMNRAGARLVAAGGSLAPTLPSLKDQMEVVRRSLKRGAA CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDYALTGKKGTGKSSGAVRQIQARLRAGQRVATNLNIHMDHLMPAHSRAFVIRLRDKPS CCCEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECEEEHHHCCCCCCCEEEEEECCCCC AHDLFSLGSGNPKIKFDPIVDTDPKSKTYGQCIGTTDPQILDGFDENENGLLVLDEMGTW HHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCH LNSRSFQDASRAPVLDWLAHGRKFGWDVFYLMQHINQVDKQLRESFIEYCVRFHRLDKIK HCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IPGVSAATRLITAGQFKGQFPRFHIGVMRLGCDPAGMVADRWVFRGGNIHKAYDTTQVFQ CCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHEECCCCEECHHHHHHHHH ESYPHGTFCYLSHWHLEGWKHPEVVPIGWRALNWMRKFWQPSVGSWSIKDRQLVAAVYAR HCCCCCEEEEEEEEECCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH EKSPQKRQKLFEVLARQQAQMNRAGARLVAAGGSLAPTLPSLKDQMEVVRRSLKRGAA CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA