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The map label for this gene is 94313406

Identifier: 94313406

GI number: 94313406

Start: 1081106

End: 1082599

Strand: Direct

Name: 94313406

Synonym: Rmet_4481

Alternate gene names: NA

Gene position: 1081106-1082599 (Clockwise)

Preceding gene: 94313405

Following gene: 94313408

Centisome position: 41.9

GC content: 64.73

Gene sequence:

>1494_bases
ATGAAGATTCTGATCGCCAGACTCAATCACGAAACAAACACGTACTCGCCGGTGGCAACACCACTTGAGTCCTTCAGCCC
ACGATACGGAGCCCAGGGGTATCGGGCCGCCAAGGGCACGCGCACCGCAGCCGGCGCGTTCATCGACCTCGCCGAAGCGG
TGGGCGCGGAAATCGTGGTGCCGGTGATCGCCGGCGCGAACCCAAGTGGCCGTGTGGCCGCTGACGCCTATACGCACCTG
ACGGACACGATCGTCGCGGCGGCGGCGGGCTGTGATGCAGTGATGCTCGATCTGCACGGCGCGATGGTCGCGGAGAACAG
CGACGATGGCGAAGGAGAGCTGCTCCAGCGCCTGCGGCAAGTCCTGCCCGACGCGCCGATTGCGGTTGCGCTCGATCTGC
ACGGCAATATCACGCAGCCCCTGATCGACCATGCCGACATTGCCGTCAGCTTCAAGACCTATCCACATATCGACATGTAC
GAAACGGGTGAACATGCTGGCCGCCTGCTTCTGGAGATGATCGCGGGGCGCGTGCGTCCCGTCATGGCGTGGCGCAGACC
GCCGCTTGTTACCCATACCCTGCGCAGCCGTACCGACGAAGGGGCCATGCAACGGGCGGTGGCACTGGCCAAGGAGGCGG
AAAAGGGCGGCATGTTGGCGGTATCCATCCTGGCCGGCTTTGGTCTGGCCGACATTCCGGCGCCGTGCATCAGCGTGATC
GTGGTGGGCGATGGCGATCGCCGGAAGGCGGACGAGGTGGCCGAGCGCATCGCGGCGCAGATCTGGGAAGAGCGCGAAGG
CTTCACGTATCGACCCGATCCGTTGCCGACATCCATCGCCATGGCGGCGGCTGCGGCGAACGCCACCGCCGAGCACCGTC
CCGTGCTGCTCCTCGATCATGGTGACAACTGCATGTCGGGCGGCACCTGCGACGACATGGCCGTTCTGCACGAGGCGTTG
GCCCAGGGCCTGGATGGCATCGCAGTCGGCCCGGTGTGCGACCCGGAAGCCGTGGCCCAACTGATCGCGGCAGGCGTGGG
AGCAAGCGTCACGCTCAACGTCGGCGACAAGGTGGCCGCGCCGCAGCTCAGCGTGTATCCGGAATCAAAGCCGCTATCCG
GCAAGGTCACCGCGATCAGCGACGGGGAATACGTCATCTCCGGCCCGACATATACGGGCCAGCGCATCCGGATGGGCCGC
ACGGTGCTGCTCGATACCGGTGCGGCAAAGGTCATCGTCACCGAAACGCCGCAAGAGCATTGGGACCTTGGCATCTTCAC
CCATATCGGCGTGGACCCTCACGCCGCACGGTTCCTGATCCTGAAGTCGCGCATGTATTGCAGGCCGGTTTTCGTGCCGA
TCGCGAAGTCAGTGATCGAATGCGATAGCGAAGGCGTGACCAGTTCGCGCTATGAGATGTTCCCGTTCCGCAATGTCTCC
AGGCCGGTGTACCCGCTGGACAAGGACACGGCCTGGTCGGCGTCGGCAGGTTGA

Upstream 100 bases:

>100_bases
ACCAGAGCATCTGGAGGCGGGGGCCAACGTGCTGCTTCATGCCATGCTCGATGCGGCCAATCGGTAATCGTCGACGTCAT
TCCGATCATTCAGGACACCC

Downstream 100 bases:

>100_bases
TTTGACCGCGGAAGGGCGCAGGGCAGGGGGCTCATGCGCTCAACCTGGCCGTCGATCCGGCACGGCCGTCTCAAATAGCA
GCCCGAGCTCGGCTGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: MlrC Domain-Containing Protein; MlrC Domain Protein; MlrC Family; Microcystin LR Degradation Protein MlrC; MlrC-Like; MlrC C-Terminus Family; MlrC Family Protein; Peptidase; MlrC C-Terminal Domain Family Protein; MlrC-Like Protein; Cytoplasmic Protein; Microcystin Lr Degradation Protein Mlrc-Like Protein; MlrC C-Terminus Family Protein; LOW QUALITY PROTEIN MlrC C-Terminus Superfamily Protein; Microcystin Lr Degradation Domain; MlrC C-Terminus Superfamily Protein

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MKILIARLNHETNTYSPVATPLESFSPRYGAQGYRAAKGTRTAAGAFIDLAEAVGAEIVVPVIAGANPSGRVAADAYTHL
TDTIVAAAAGCDAVMLDLHGAMVAENSDDGEGELLQRLRQVLPDAPIAVALDLHGNITQPLIDHADIAVSFKTYPHIDMY
ETGEHAGRLLLEMIAGRVRPVMAWRRPPLVTHTLRSRTDEGAMQRAVALAKEAEKGGMLAVSILAGFGLADIPAPCISVI
VVGDGDRRKADEVAERIAAQIWEEREGFTYRPDPLPTSIAMAAAAANATAEHRPVLLLDHGDNCMSGGTCDDMAVLHEAL
AQGLDGIAVGPVCDPEAVAQLIAAGVGASVTLNVGDKVAAPQLSVYPESKPLSGKVTAISDGEYVISGPTYTGQRIRMGR
TVLLDTGAAKVIVTETPQEHWDLGIFTHIGVDPHAARFLILKSRMYCRPVFVPIAKSVIECDSEGVTSSRYEMFPFRNVS
RPVYPLDKDTAWSASAG

Sequences:

>Translated_497_residues
MKILIARLNHETNTYSPVATPLESFSPRYGAQGYRAAKGTRTAAGAFIDLAEAVGAEIVVPVIAGANPSGRVAADAYTHL
TDTIVAAAAGCDAVMLDLHGAMVAENSDDGEGELLQRLRQVLPDAPIAVALDLHGNITQPLIDHADIAVSFKTYPHIDMY
ETGEHAGRLLLEMIAGRVRPVMAWRRPPLVTHTLRSRTDEGAMQRAVALAKEAEKGGMLAVSILAGFGLADIPAPCISVI
VVGDGDRRKADEVAERIAAQIWEEREGFTYRPDPLPTSIAMAAAAANATAEHRPVLLLDHGDNCMSGGTCDDMAVLHEAL
AQGLDGIAVGPVCDPEAVAQLIAAGVGASVTLNVGDKVAAPQLSVYPESKPLSGKVTAISDGEYVISGPTYTGQRIRMGR
TVLLDTGAAKVIVTETPQEHWDLGIFTHIGVDPHAARFLILKSRMYCRPVFVPIAKSVIECDSEGVTSSRYEMFPFRNVS
RPVYPLDKDTAWSASAG
>Mature_497_residues
MKILIARLNHETNTYSPVATPLESFSPRYGAQGYRAAKGTRTAAGAFIDLAEAVGAEIVVPVIAGANPSGRVAADAYTHL
TDTIVAAAAGCDAVMLDLHGAMVAENSDDGEGELLQRLRQVLPDAPIAVALDLHGNITQPLIDHADIAVSFKTYPHIDMY
ETGEHAGRLLLEMIAGRVRPVMAWRRPPLVTHTLRSRTDEGAMQRAVALAKEAEKGGMLAVSILAGFGLADIPAPCISVI
VVGDGDRRKADEVAERIAAQIWEEREGFTYRPDPLPTSIAMAAAAANATAEHRPVLLLDHGDNCMSGGTCDDMAVLHEAL
AQGLDGIAVGPVCDPEAVAQLIAAGVGASVTLNVGDKVAAPQLSVYPESKPLSGKVTAISDGEYVISGPTYTGQRIRMGR
TVLLDTGAAKVIVTETPQEHWDLGIFTHIGVDPHAARFLILKSRMYCRPVFVPIAKSVIECDSEGVTSSRYEMFPFRNVS
RPVYPLDKDTAWSASAG

Specific function: Unknown

COG id: COG5476

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52739; Mature: 52739

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILIARLNHETNTYSPVATPLESFSPRYGAQGYRAAKGTRTAAGAFIDLAEAVGAEIVV
CEEEEEEECCCCCCCCCHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
PVIAGANPSGRVAADAYTHLTDTIVAAAAGCDAVMLDLHGAMVAENSDDGEGELLQRLRQ
EEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCHHHHHHHHHH
VLPDAPIAVALDLHGNITQPLIDHADIAVSFKTYPHIDMYETGEHAGRLLLEMIAGRVRP
HCCCCCEEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
VMAWRRPPLVTHTLRSRTDEGAMQRAVALAKEAEKGGMLAVSILAGFGLADIPAPCISVI
HHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCCEEEEE
VVGDGDRRKADEVAERIAAQIWEEREGFTYRPDPLPTSIAMAAAAANATAEHRPVLLLDH
EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEC
GDNCMSGGTCDDMAVLHEALAQGLDGIAVGPVCDPEAVAQLIAAGVGASVTLNVGDKVAA
CCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
PQLSVYPESKPLSGKVTAISDGEYVISGPTYTGQRIRMGRTVLLDTGAAKVIVTETPQEH
CEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCEEECCCEEEEECCCEEEEEECCCHHH
WDLGIFTHIGVDPHAARFLILKSRMYCRPVFVPIAKSVIECDSEGVTSSRYEMFPFRNVS
CCCEEEEECCCCHHHHHEEEECCCHHHCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
RPVYPLDKDTAWSASAG
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKILIARLNHETNTYSPVATPLESFSPRYGAQGYRAAKGTRTAAGAFIDLAEAVGAEIVV
CEEEEEEECCCCCCCCCHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
PVIAGANPSGRVAADAYTHLTDTIVAAAAGCDAVMLDLHGAMVAENSDDGEGELLQRLRQ
EEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCHHHHHHHHHH
VLPDAPIAVALDLHGNITQPLIDHADIAVSFKTYPHIDMYETGEHAGRLLLEMIAGRVRP
HCCCCCEEEEEECCCCCCHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
VMAWRRPPLVTHTLRSRTDEGAMQRAVALAKEAEKGGMLAVSILAGFGLADIPAPCISVI
HHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCCEEEEE
VVGDGDRRKADEVAERIAAQIWEEREGFTYRPDPLPTSIAMAAAAANATAEHRPVLLLDH
EECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEC
GDNCMSGGTCDDMAVLHEALAQGLDGIAVGPVCDPEAVAQLIAAGVGASVTLNVGDKVAA
CCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCC
PQLSVYPESKPLSGKVTAISDGEYVISGPTYTGQRIRMGRTVLLDTGAAKVIVTETPQEH
CEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCEEECCCEEEEECCCEEEEEECCCHHH
WDLGIFTHIGVDPHAARFLILKSRMYCRPVFVPIAKSVIECDSEGVTSSRYEMFPFRNVS
CCCEEEEECCCCHHHHHEEEECCCHHHCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
RPVYPLDKDTAWSASAG
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA