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The map label for this gene is 94313315

Identifier: 94313315

GI number: 94313315

Start: 987919

End: 988392

Strand: Direct

Name: 94313315

Synonym: Rmet_4390

Alternate gene names: NA

Gene position: 987919-988392 (Clockwise)

Preceding gene: 94313314

Following gene: 94313316

Centisome position: 38.29

GC content: 66.67

Gene sequence:

>474_bases
ATGCGCACACCCGCACCGATATCGACCTTGCCGCCCGTTGGCGAGCTGGTGCCGCATGACGGCGCGATGCGTCTGATCGA
CGAACTGCTGGCAGCCGATGACACCCAGTGCGTGGCGCGCGCGACAGTCAGGTCGACGCAGTTGTTCGTCGATGACGCTG
GGATGCCCGCATGGATTGGCATCGAGTACATGGCGCAGACGATCGCGGCATGGGCGGGTATGCAGGCTCGCGGCAAGGGA
TGCAAGCCCGGCCCGGGTTTCCTGCTGGGCTCGCGCCGCTATGCCAGTGACGTGCCCGCGTTTCCGGTGGGCAGCGTGCT
GACCATTCGTGCCCGGCTGGAGATGACGGGTGATGACGGCCTGTCGCTGTTCGCCTGCACGCTGGACATGGGCGGCCAGG
AGGTGGCTCGGGCAACGGTTTCGGTATATCGGCCTGCGGACGCGCAGGCCTTCCTCGAGGGGCAGCAGACATGA

Upstream 100 bases:

>100_bases
GCGCTGACGAATCCCTGGGCCGGCCGGTGCGCCATGCGGTGAGCAATTCATTTGCGTTTGGGGGTAGCAATTGCGTATTG
GTGATGGGGGAGGGCTAAAG

Downstream 100 bases:

>100_bases
CAACCCAGACCGTGCTCGTCACGGGATCATCGCGCGGCATCGGCCGCGCCATTGCGCTGCGTCTTGCGCGCGATGGCTAT
GACGTGGTGATCCACTGCCG

Product: putative beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratase

Products: NA

Alternate protein names: Beta-Hydroxydecanoyl-ACP Dehydrase; 3-Hydroxylacyl-(Acyl Carrier Protein) Dehydratase; Dehydratase; Beta-Hydroxyacyl-Acyl Carrier Protein-Dehydratase; FabA-Like Domain-Containing Protein; 3-Hydroxy-Fatty Acyl-(Acyl Carrier Protein) Dehydratase; -Hydroxymyristoyl-[Acyl Carrier Protein] Dehydratase; Beta-Ketoacyl Synthase

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRTPAPISTLPPVGELVPHDGAMRLIDELLAADDTQCVARATVRSTQLFVDDAGMPAWIGIEYMAQTIAAWAGMQARGKG
CKPGPGFLLGSRRYASDVPAFPVGSVLTIRARLEMTGDDGLSLFACTLDMGGQEVARATVSVYRPADAQAFLEGQQT

Sequences:

>Translated_157_residues
MRTPAPISTLPPVGELVPHDGAMRLIDELLAADDTQCVARATVRSTQLFVDDAGMPAWIGIEYMAQTIAAWAGMQARGKG
CKPGPGFLLGSRRYASDVPAFPVGSVLTIRARLEMTGDDGLSLFACTLDMGGQEVARATVSVYRPADAQAFLEGQQT
>Mature_157_residues
MRTPAPISTLPPVGELVPHDGAMRLIDELLAADDTQCVARATVRSTQLFVDDAGMPAWIGIEYMAQTIAAWAGMQARGKG
CKPGPGFLLGSRRYASDVPAFPVGSVLTIRARLEMTGDDGLSLFACTLDMGGQEVARATVSVYRPADAQAFLEGQQT

Specific function: Unknown

COG id: COG4706

COG function: function code I; Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16641; Mature: 16641

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPAPISTLPPVGELVPHDGAMRLIDELLAADDTQCVARATVRSTQLFVDDAGMPAWIG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHEEEEEECCCCCHHHH
IEYMAQTIAAWAGMQARGKGCKPGPGFLLGSRRYASDVPAFPVGSVLTIRARLEMTGDDG
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCC
LSLFACTLDMGGQEVARATVSVYRPADAQAFLEGQQT
CEEEEEEECCCCHHHHHHHHHEECCCCHHHHHCCCCC
>Mature Secondary Structure
MRTPAPISTLPPVGELVPHDGAMRLIDELLAADDTQCVARATVRSTQLFVDDAGMPAWIG
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHEEEEEECCCCCHHHH
IEYMAQTIAAWAGMQARGKGCKPGPGFLLGSRRYASDVPAFPVGSVLTIRARLEMTGDDG
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCC
LSLFACTLDMGGQEVARATVSVYRPADAQAFLEGQQT
CEEEEEEECCCCHHHHHHHHHEECCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA