Click here to switch to the map view.

The map label for this gene is 94313311

Identifier: 94313311

GI number: 94313311

Start: 982574

End: 984934

Strand: Direct

Name: 94313311

Synonym: Rmet_4386

Alternate gene names: NA

Gene position: 982574-984934 (Clockwise)

Preceding gene: 94313310

Following gene: 94313312

Centisome position: 38.08

GC content: 68.78

Gene sequence:

>2361_bases
ATGCAGGGCGGGCTGACCCGCCGCGAGCGCCTGCTGGCGATTGGCTGGCTGCTGCTCGTGATTGCGCTGATCGCGCACCA
GGTGCAGTTCTGGCGTGCATCGCGGCTCGACACCGACGTGATGGCGCTGCTGCCGACCAGCGAGCGCACCGCCACGGCCG
ATCGCGTGCTGCGGCAGCTGACCGACGGTGTGTCGCGCGAGATCGTCGTGTTGGTGGGGGGCTCGGACTGGGCCCGCACG
CGCGCGGCGGCGCAGCGCTTCTCGCAGGCCACGTCCGGCGGCAGCGCGTTGCTGAAGCCCGTCGACAAGATTGCCGCGTT
CGATTTCGATGCGGCGCTGGCGTTCTACCGGCCGTGGCGCGACGGGCTTCTGACCGACGCGCAGCGCGAGGCATTGCGCA
CGACCAATGCCGATACGCTCGCGCAGCAGGCGCTGACGCGGCTCTACCAGTTTTCCACCGGACCGCGCCTGACCGATTGG
GCGTCCGACCCGCTCGGGCTGTGGCAGAACTGGTGGCTGTCTCGCGCGGCGGTGACCCGCGTACATGAGCGCGATGGTCT
GGCAACGGTGACCGGCGAAGGCAAGGATTGGGTGCTGTTGACCTATCGGATCACCAAGCCCGCGTTTTCCGCCAATGGCA
GCACCGACTACGGCGACCTGCTCCACGCGGCGGAAGCGGCGGCGCGTCAGGGCGACGACGGCGTGCGCGTGGTGACGGCC
GGCATCCCGCTGCACGCCGAAGCCGCGGCCGCGCAGGCCAATTGGGAAATGAACGTGATCGGATGGGGTTCGCTGGCCGC
GGTGCTGCTGCTGGTGTGGCTGGCCTTCCGTTCGCTGCGGCCCATCGTGCTGGTGGGGCTGTCACTGCTGATCGGGACGG
CGGCAGCAATCTCCGCCACGGCGATCGTCTTCGACCGCGTCCACCTGATCACGCTGGTGTTCGGCGCCAGTCTGGTCGGG
GTGGCCGAGGATTTCGGCATCCACTACTTCGTGACGCGCCAGGCCATGCCACGCGCGACACCGCCTGCCGTGATGCGCTT
CCTGGCGCCCGGACTGGCGCTGGCGTTGTCTACGAGCGTAGTGGCCTATCTCGCGCTTGGCATCGCACCGTTCCCCGGGC
TGCGCCAGATGGCGCTGTTTTCCGCGGTTGGCCTGATCACGGCCTTCCTGACCGTGCTGTTCTGGTTCCCTTTGCTCGAT
CGGGGCAACCTGCGTCCGACGCGTCTTTCCACCTGGCTTGCCGATAGCCTGGCGCGCTGGCCGTACGCACGCAATGACCG
GCGTACCTGGCTGGCGCTTGGCGTGTTGATGCTGTTCATCGTGACCGGCATCTGGCAGGTGCGCGTTGCCGACGACATCC
GGCAACTGCAGAGTTCGCCGCCCGCGCTGATCGAGGCGCAACGCACGGCAGGGCAGTTGCTGGGCACGCCAAGCCCGGCG
CAGTTCATCCTCGTGCGTGGCGCAACGCCGGACGAGGTGCTCGCGCGCGAGGAGGCGATCAAGGCCGGGTTGGCCGATGC
GATCCGGCGCGGCGATCTGGCCGGCTTCATTGCGATCTCGGACTGGGTGCCGTCCGCCGGCCGTCAGCAAGCCGATGCCG
CGCTGGCCGATCGGCAGGAGGCGGCGATCCGCGCACGCGTGGCCAGCGCAGTGGGCGGCTCGATCGCGCCGCCCGCTCCG
TCCGCGCGTGCTGGTGACGCCGTGCTGACGCTGCCCGCGTGGCTGGCGAATCCGGTATCGGAAACGCCGCGGCACCTGTG
GCTTGGCCGCGAGGGCAATGGTTTCGCCAGCGTGATGCTGTTGCGCGGCCTGGACCACGTGTCGGCGATTGACGGTATCG
CGGCGTCGGTGCGGCAGGTGCCCGGCGCGGAGTGGGTCGATCGCGTGGCCGATATCTCGTTCCTGCTCCATCACTACCGG
GTATTGATGAGCTGGTTCCTGCTGGCAGGCGCCGTGGGCGTGGCACTGCTGCTCTGGTGGCGTTATGGCCGCTCGGGCTG
GCGCGCCCTCGTGCCGACGCTGCTGGCGGCGGCGTTCAGTGTGGCCGTGCTGGGCTGGACCGGCGTGCCACTGCAATTGT
TCTCGGTGCTCGCGCTGGCGCTGCTGCTGGGTGTGGGCGTCGACTATGGAATTTTCCTGCTCGAACACCCGGGCGATGGC
GTGTCCTGGACCGCCATCGTGCTCGGGGCGGCCAGCACGTTGCTGGCCTTCGGGCTGCTTGCGTTGTCGTCGACTCCCGC
GCTTCATGCGTTCGGGGCGACGATGCTGTCGGGCGTGGGTGCGGTCTGGGTGATGTCGCCGTGGTTCAGGCCGCTGCCCG
GAACGTCATCGCATCAAATCAGTCAGGAAGGATCTCAATGA

Upstream 100 bases:

>100_bases
GGCGACAGCACCGTCGTCAGGATGATCGACCCCGCCGGAGCGGAAAAACTCAGTCCTTCGGAGGAACAACGTTTTGAATG
AACTGGCCCACGGGGCCGCG

Downstream 100 bases:

>100_bases
AGAAAGAGACAGTGGACGTACTGATCGTCGGCGCGGGCCCGGCGGGTTCCGTGGCGGCCGGATTGCTGCGCAAGCGCGGC
ATCGGCGTGCTGGTGATCGA

Product: lipoprotein transmembrane

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 786; Mature: 786

Protein sequence:

>786_residues
MQGGLTRRERLLAIGWLLLVIALIAHQVQFWRASRLDTDVMALLPTSERTATADRVLRQLTDGVSREIVVLVGGSDWART
RAAAQRFSQATSGGSALLKPVDKIAAFDFDAALAFYRPWRDGLLTDAQREALRTTNADTLAQQALTRLYQFSTGPRLTDW
ASDPLGLWQNWWLSRAAVTRVHERDGLATVTGEGKDWVLLTYRITKPAFSANGSTDYGDLLHAAEAAARQGDDGVRVVTA
GIPLHAEAAAAQANWEMNVIGWGSLAAVLLLVWLAFRSLRPIVLVGLSLLIGTAAAISATAIVFDRVHLITLVFGASLVG
VAEDFGIHYFVTRQAMPRATPPAVMRFLAPGLALALSTSVVAYLALGIAPFPGLRQMALFSAVGLITAFLTVLFWFPLLD
RGNLRPTRLSTWLADSLARWPYARNDRRTWLALGVLMLFIVTGIWQVRVADDIRQLQSSPPALIEAQRTAGQLLGTPSPA
QFILVRGATPDEVLAREEAIKAGLADAIRRGDLAGFIAISDWVPSAGRQQADAALADRQEAAIRARVASAVGGSIAPPAP
SARAGDAVLTLPAWLANPVSETPRHLWLGREGNGFASVMLLRGLDHVSAIDGIAASVRQVPGAEWVDRVADISFLLHHYR
VLMSWFLLAGAVGVALLLWWRYGRSGWRALVPTLLAAAFSVAVLGWTGVPLQLFSVLALALLLGVGVDYGIFLLEHPGDG
VSWTAIVLGAASTLLAFGLLALSSTPALHAFGATMLSGVGAVWVMSPWFRPLPGTSSHQISQEGSQ

Sequences:

>Translated_786_residues
MQGGLTRRERLLAIGWLLLVIALIAHQVQFWRASRLDTDVMALLPTSERTATADRVLRQLTDGVSREIVVLVGGSDWART
RAAAQRFSQATSGGSALLKPVDKIAAFDFDAALAFYRPWRDGLLTDAQREALRTTNADTLAQQALTRLYQFSTGPRLTDW
ASDPLGLWQNWWLSRAAVTRVHERDGLATVTGEGKDWVLLTYRITKPAFSANGSTDYGDLLHAAEAAARQGDDGVRVVTA
GIPLHAEAAAAQANWEMNVIGWGSLAAVLLLVWLAFRSLRPIVLVGLSLLIGTAAAISATAIVFDRVHLITLVFGASLVG
VAEDFGIHYFVTRQAMPRATPPAVMRFLAPGLALALSTSVVAYLALGIAPFPGLRQMALFSAVGLITAFLTVLFWFPLLD
RGNLRPTRLSTWLADSLARWPYARNDRRTWLALGVLMLFIVTGIWQVRVADDIRQLQSSPPALIEAQRTAGQLLGTPSPA
QFILVRGATPDEVLAREEAIKAGLADAIRRGDLAGFIAISDWVPSAGRQQADAALADRQEAAIRARVASAVGGSIAPPAP
SARAGDAVLTLPAWLANPVSETPRHLWLGREGNGFASVMLLRGLDHVSAIDGIAASVRQVPGAEWVDRVADISFLLHHYR
VLMSWFLLAGAVGVALLLWWRYGRSGWRALVPTLLAAAFSVAVLGWTGVPLQLFSVLALALLLGVGVDYGIFLLEHPGDG
VSWTAIVLGAASTLLAFGLLALSSTPALHAFGATMLSGVGAVWVMSPWFRPLPGTSSHQISQEGSQ
>Mature_786_residues
MQGGLTRRERLLAIGWLLLVIALIAHQVQFWRASRLDTDVMALLPTSERTATADRVLRQLTDGVSREIVVLVGGSDWART
RAAAQRFSQATSGGSALLKPVDKIAAFDFDAALAFYRPWRDGLLTDAQREALRTTNADTLAQQALTRLYQFSTGPRLTDW
ASDPLGLWQNWWLSRAAVTRVHERDGLATVTGEGKDWVLLTYRITKPAFSANGSTDYGDLLHAAEAAARQGDDGVRVVTA
GIPLHAEAAAAQANWEMNVIGWGSLAAVLLLVWLAFRSLRPIVLVGLSLLIGTAAAISATAIVFDRVHLITLVFGASLVG
VAEDFGIHYFVTRQAMPRATPPAVMRFLAPGLALALSTSVVAYLALGIAPFPGLRQMALFSAVGLITAFLTVLFWFPLLD
RGNLRPTRLSTWLADSLARWPYARNDRRTWLALGVLMLFIVTGIWQVRVADDIRQLQSSPPALIEAQRTAGQLLGTPSPA
QFILVRGATPDEVLAREEAIKAGLADAIRRGDLAGFIAISDWVPSAGRQQADAALADRQEAAIRARVASAVGGSIAPPAP
SARAGDAVLTLPAWLANPVSETPRHLWLGREGNGFASVMLLRGLDHVSAIDGIAASVRQVPGAEWVDRVADISFLLHHYR
VLMSWFLLAGAVGVALLLWWRYGRSGWRALVPTLLAAAFSVAVLGWTGVPLQLFSVLALALLLGVGVDYGIFLLEHPGDG
VSWTAIVLGAASTLLAFGLLALSSTPALHAFGATMLSGVGAVWVMSPWFRPLPGTSSHQISQEGSQ

Specific function: Unknown

COG id: COG4258

COG function: function code R; Predicted exporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84388; Mature: 84388

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGGLTRRERLLAIGWLLLVIALIAHQVQFWRASRLDTDVMALLPTSERTATADRVLRQL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHHHHHHHHH
TDGVSREIVVLVGGSDWARTRAAAQRFSQATSGGSALLKPVDKIAAFDFDAALAFYRPWR
HCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCHH
DGLLTDAQREALRTTNADTLAQQALTRLYQFSTGPRLTDWASDPLGLWQNWWLSRAAVTR
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VHERDGLATVTGEGKDWVLLTYRITKPAFSANGSTDYGDLLHAAEAAARQGDDGVRVVTA
HHHHCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE
GIPLHAEAAAAQANWEMNVIGWGSLAAVLLLVWLAFRSLRPIVLVGLSLLIGTAAAISAT
CCCCCCHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AIVFDRVHLITLVFGASLVGVAEDFGIHYFVTRQAMPRATPPAVMRFLAPGLALALSTSV
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
VAYLALGIAPFPGLRQMALFSAVGLITAFLTVLFWFPLLDRGNLRPTRLSTWLADSLARW
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
PYARNDRRTWLALGVLMLFIVTGIWQVRVADDIRQLQSSPPALIEAQRTAGQLLGTPSPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECHHHHHHHCCCCCCC
QFILVRGATPDEVLAREEAIKAGLADAIRRGDLAGFIAISDWVPSAGRQQADAALADRQE
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
AAIRARVASAVGGSIAPPAPSARAGDAVLTLPAWLANPVSETPRHLWLGREGNGFASVML
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHCCCHHCCCCCEEECCCCCCHHHHHH
LRGLDHVSAIDGIAASVRQVPGAEWVDRVADISFLLHHYRVLMSWFLLAGAVGVALLLWW
HHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYGRSGWRALVPTLLAAAFSVAVLGWTGVPLQLFSVLALALLLGVGVDYGIFLLEHPGDG
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
VSWTAIVLGAASTLLAFGLLALSSTPALHAFGATMLSGVGAVWVMSPWFRPLPGTSSHQI
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCC
SQEGSQ
CCCCCC
>Mature Secondary Structure
MQGGLTRRERLLAIGWLLLVIALIAHQVQFWRASRLDTDVMALLPTSERTATADRVLRQL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHHHHHHHHH
TDGVSREIVVLVGGSDWARTRAAAQRFSQATSGGSALLKPVDKIAAFDFDAALAFYRPWR
HCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCHH
DGLLTDAQREALRTTNADTLAQQALTRLYQFSTGPRLTDWASDPLGLWQNWWLSRAAVTR
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
VHERDGLATVTGEGKDWVLLTYRITKPAFSANGSTDYGDLLHAAEAAARQGDDGVRVVTA
HHHHCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEE
GIPLHAEAAAAQANWEMNVIGWGSLAAVLLLVWLAFRSLRPIVLVGLSLLIGTAAAISAT
CCCCCCHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AIVFDRVHLITLVFGASLVGVAEDFGIHYFVTRQAMPRATPPAVMRFLAPGLALALSTSV
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
VAYLALGIAPFPGLRQMALFSAVGLITAFLTVLFWFPLLDRGNLRPTRLSTWLADSLARW
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
PYARNDRRTWLALGVLMLFIVTGIWQVRVADDIRQLQSSPPALIEAQRTAGQLLGTPSPA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECHHHHHHHCCCCCCC
QFILVRGATPDEVLAREEAIKAGLADAIRRGDLAGFIAISDWVPSAGRQQADAALADRQE
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
AAIRARVASAVGGSIAPPAPSARAGDAVLTLPAWLANPVSETPRHLWLGREGNGFASVML
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHCCCHHCCCCCEEECCCCCCHHHHHH
LRGLDHVSAIDGIAASVRQVPGAEWVDRVADISFLLHHYRVLMSWFLLAGAVGVALLLWW
HHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYGRSGWRALVPTLLAAAFSVAVLGWTGVPLQLFSVLALALLLGVGVDYGIFLLEHPGDG
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
VSWTAIVLGAASTLLAFGLLALSSTPALHAFGATMLSGVGAVWVMSPWFRPLPGTSSHQI
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCC
SQEGSQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA