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The map label for this gene is 94313269

Identifier: 94313269

GI number: 94313269

Start: 940676

End: 941791

Strand: Direct

Name: 94313269

Synonym: Rmet_4344

Alternate gene names: NA

Gene position: 940676-941791 (Clockwise)

Preceding gene: 94313265

Following gene: 94313270

Centisome position: 36.46

GC content: 58.78

Gene sequence:

>1116_bases
ATGAAATGCAAGTACCTTGCCATTGCGGTGGCAATGCTGACTGCGAGCAGTGTCCAAGCGCAATCGAGCGTTACCCTGTA
TGGCGTTGTTGATGCCGGTATCGAGTACCTGAACCATGCTGTCGCATCGACGGGAACCGTTGCACCGGGTGCCAAGGGAC
ATAGCCTGGTGGCCTTGCAATCAGGCAACCAGTCCGGATCACGCTGGGGTCTGCGTGGCATCGAGGACCTGGGTGGCGGC
CTGAGGAGCCTCTTTGTTCTGGAAAGCGGATTCTCCATCGACACCGGCACGAGCACCCAAAGCGGTCGCCTGTTCGGACG
CGGTGCCTACGTCGGACTCGAGAACCAATGGGGCAGGCTGACGTTGGGTCGCCACACGGTGCCGTTCTATGACTTTGCGG
TGACGTACGATCCGATGGCGATTTCGAGCCGCTACGCTATCGGCGCGCAGGATCCGTTCATGGGAGCGGCGCGTGCAGAC
AATTCTGTCAAGTACATGGGCACCTTTGGCGGCCTGAGCGTGACAGGACTGTATAGCTTCAACTACAACAACCAGGAAGT
TCCGGGCAACTTCACGAACGGCCGCGAGTACTCTCTCGGCGCGAACTATTCTGGCGGCTCGTTCTCGATTGGGGCAGTCT
ACGATCAGATCAACCAATCGGCCGCCACGGCATTGCAAACAAATAGCCTGACGCAACGGGCAGCGGTGGCCGGTACGTAC
GCCTACGGCAACGCCAAGGTTTACGCGGGCTACCGCTATGCGCACGCGTTCAACGGTGCCAGCCTGCCTGGTTCCACAGT
GGCTAACACTGCGTCGAACCTCGCTTGGGCAGGTGTTGGCTATCAACTGACACCTGCTCTCTCATTCGCTGGCTCGGCCT
ATTACCAGAATCTTCGCAACTCCCGATCTGGCAACCCATGGCAGTTCGTCATGGTGGCCGACTATGCGCTGTCGAAGCGC
ACCGACCTATATACGGCAGCATCGTATGTGCTTAACAAGGGCAAATCGAGCCTGGGCGTGAATGGCTTCAACAGCCAGCT
GGGGACGACGAGCGAGGCCGTACAACCTGGCGCCAATCAATTCGGTGCTGTAGTCGGTGTTCGGCACAAGTTCTGA

Upstream 100 bases:

>100_bases
GATTCCAAAGTCCCATCGAGCCAGAACAACAATGAATTCACGGCGCGTATGCCGTCCTTCTTTGGGACGGAGCCGTCCCC
ATTCACGAGGAGACCATTGA

Downstream 100 bases:

>100_bases
GCCGACCGGTACGGCGCCCTGCCTTTCAAGCGGTGCCACATACGCGTGCTATATATTTGTCCTTTCGACAGCATGGCGAG
GTAGGTCCGCATGGCAAAGA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MKCKYLAIAVAMLTASSVQAQSSVTLYGVVDAGIEYLNHAVASTGTVAPGAKGHSLVALQSGNQSGSRWGLRGIEDLGGG
LRSLFVLESGFSIDTGTSTQSGRLFGRGAYVGLENQWGRLTLGRHTVPFYDFAVTYDPMAISSRYAIGAQDPFMGAARAD
NSVKYMGTFGGLSVTGLYSFNYNNQEVPGNFTNGREYSLGANYSGGSFSIGAVYDQINQSAATALQTNSLTQRAAVAGTY
AYGNAKVYAGYRYAHAFNGASLPGSTVANTASNLAWAGVGYQLTPALSFAGSAYYQNLRNSRSGNPWQFVMVADYALSKR
TDLYTAASYVLNKGKSSLGVNGFNSQLGTTSEAVQPGANQFGAVVGVRHKF

Sequences:

>Translated_371_residues
MKCKYLAIAVAMLTASSVQAQSSVTLYGVVDAGIEYLNHAVASTGTVAPGAKGHSLVALQSGNQSGSRWGLRGIEDLGGG
LRSLFVLESGFSIDTGTSTQSGRLFGRGAYVGLENQWGRLTLGRHTVPFYDFAVTYDPMAISSRYAIGAQDPFMGAARAD
NSVKYMGTFGGLSVTGLYSFNYNNQEVPGNFTNGREYSLGANYSGGSFSIGAVYDQINQSAATALQTNSLTQRAAVAGTY
AYGNAKVYAGYRYAHAFNGASLPGSTVANTASNLAWAGVGYQLTPALSFAGSAYYQNLRNSRSGNPWQFVMVADYALSKR
TDLYTAASYVLNKGKSSLGVNGFNSQLGTTSEAVQPGANQFGAVVGVRHKF
>Mature_371_residues
MKCKYLAIAVAMLTASSVQAQSSVTLYGVVDAGIEYLNHAVASTGTVAPGAKGHSLVALQSGNQSGSRWGLRGIEDLGGG
LRSLFVLESGFSIDTGTSTQSGRLFGRGAYVGLENQWGRLTLGRHTVPFYDFAVTYDPMAISSRYAIGAQDPFMGAARAD
NSVKYMGTFGGLSVTGLYSFNYNNQEVPGNFTNGREYSLGANYSGGSFSIGAVYDQINQSAATALQTNSLTQRAAVAGTY
AYGNAKVYAGYRYAHAFNGASLPGSTVANTASNLAWAGVGYQLTPALSFAGSAYYQNLRNSRSGNPWQFVMVADYALSKR
TDLYTAASYVLNKGKSSLGVNGFNSQLGTTSEAVQPGANQFGAVVGVRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39013; Mature: 39013

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCKYLAIAVAMLTASSVQAQSSVTLYGVVDAGIEYLNHAVASTGTVAPGAKGHSLVALQ
CCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
SGNQSGSRWGLRGIEDLGGGLRSLFVLESGFSIDTGTSTQSGRLFGRGAYVGLENQWGRL
CCCCCCCCCCCCCHHHHCCHHHEEEEEECCCCCCCCCCCCCCEEEECEEEEEECCCCCEE
TLGRHTVPFYDFAVTYDPMAISSRYAIGAQDPFMGAARADNSVKYMGTFGGLSVTGLYSF
EECCCCCCEEEEEEEECCEEECCEEEECCCCCCCCHHCCCCCEEEEEECCCEEEEEEEEE
NYNNQEVPGNFTNGREYSLGANYSGGSFSIGAVYDQINQSAATALQTNSLTQRAAVAGTY
CCCCCCCCCCCCCCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEE
AYGNAKVYAGYRYAHAFNGASLPGSTVANTASNLAWAGVGYQLTPALSFAGSAYYQNLRN
EECCEEEEEEEEEEEECCCCCCCCCHHHHHHCCCEEECCCEEECHHHHHHHHHHHHHHHC
SRSGNPWQFVMVADYALSKRTDLYTAASYVLNKGKSSLGVNGFNSQLGTTSEAVQPGANQ
CCCCCCEEEEEEEEEHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHH
FGAVVGVRHKF
HHHEEEEEECC
>Mature Secondary Structure
MKCKYLAIAVAMLTASSVQAQSSVTLYGVVDAGIEYLNHAVASTGTVAPGAKGHSLVALQ
CCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
SGNQSGSRWGLRGIEDLGGGLRSLFVLESGFSIDTGTSTQSGRLFGRGAYVGLENQWGRL
CCCCCCCCCCCCCHHHHCCHHHEEEEEECCCCCCCCCCCCCCEEEECEEEEEECCCCCEE
TLGRHTVPFYDFAVTYDPMAISSRYAIGAQDPFMGAARADNSVKYMGTFGGLSVTGLYSF
EECCCCCCEEEEEEEECCEEECCEEEECCCCCCCCHHCCCCCEEEEEECCCEEEEEEEEE
NYNNQEVPGNFTNGREYSLGANYSGGSFSIGAVYDQINQSAATALQTNSLTQRAAVAGTY
CCCCCCCCCCCCCCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEE
AYGNAKVYAGYRYAHAFNGASLPGSTVANTASNLAWAGVGYQLTPALSFAGSAYYQNLRN
EECCEEEEEEEEEEEECCCCCCCCCHHHHHHCCCEEECCCEEECHHHHHHHHHHHHHHHC
SRSGNPWQFVMVADYALSKRTDLYTAASYVLNKGKSSLGVNGFNSQLGTTSEAVQPGANQ
CCCCCCEEEEEEEEEHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCHH
FGAVVGVRHKF
HHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]