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The map label for this gene is ccoN [H]

Identifier: 94313247

GI number: 94313247

Start: 917180

End: 918769

Strand: Direct

Name: ccoN [H]

Synonym: Rmet_4322

Alternate gene names: 94313247

Gene position: 917180-918769 (Clockwise)

Preceding gene: 94313246

Following gene: 94313248

Centisome position: 35.55

GC content: 59.81

Gene sequence:

>1590_bases
ATGAATACAGTCGCCATCCTGATGTCGGCGTTTCTGCTTTCAGTGTTTGCCCTCGGGGCATTCATCTGGAGTATGCGGAA
GGGCCTGTTCGATACCTCGCCGGCCGCGGCACGCGTGATCTTCGCCGATGAGGAGGCTGGGCACTCGGAAGACCCAGCTT
CGGCGCGCCATGGAATTGTCGACCGGTCGCGCGAAGAAGCCGACCGGTCATCCGCGCCAGTCGTGTTCCTGTTCATCTGT
TGCGCGATGGTATGGCTTCTGGTTGCTTCGGTCGCCGGCCTGACCGCGTCGATCAAGCTGCACGAGCCCGATCTGCTGGC
TTCGGTGCCATGGCTGTCTTTTGGTCGGATACGCACGATTCATTTGAACGCGGTGGCCTATGGCTGGGCGCCGATGGCGG
GGCTTGGCATCGCGATGTTTCTGCTGCCGCGCCTACTGAAGACCGAGCTGATGGGCGGGCGCTGGGCCGTGCTGGGGGCC
GCGCTCTGGAATGCCGGGTTGATCGCGGGTATCGGCAGTATCGCGGCGGGCATTTCCGATGGACTCGAATGGCTGGAGAT
TCCCTGGCAGGTTGACATCCTGTTCGTGATCGGCGGAGCTTTCGTCGGCTTTCCCCTTGTGTTGACGCTGGTGAATCGCA
AGGTCGACCACCTCTATGTTTCCGTCTGGTACATGGGATGCGCGTTGTTCTGGTTCCCCGTGCTCTTTCTCGTTGCCAAC
ATTCCGGGTCTCCATTTCGGCGTGGAGCAGGCCACTATGAACTGGTGGTTCGGGCATAACGTGCTGGGTCTGTTCTACAC
GCCGCTTGCGCTTGCCTCGATCTACTACTTCCTGCCGAAGATCATTGGGCAGCCTGTCAGGTCTTATGGCTTGTCATTGC
TTGGGTTCTGGGCGCTGGCTTTCTTCTACGGACAAGTGGGCGGGCACCACCTGGTGGGCGGACCGGTACCGGGGTGGCTG
ATCACACTGTCAATCGTGCAGAGCATGATGATGTTGATTCCAGTCATCGCGTTCTCAATCAACCAGCACCAGACGCTACG
AGGCCATTTTCGCCAGCTGATCGAATCCCCGACGCTTCGGTTCGTGACTTTCGGCGGCATGATGTACACGCTGAGCTCGA
TTCAGGGTTCCTTCGAGGCGTTGCGAGCCGTCAATCGCGTCACCCACTTCACGCACTACACGGTCGCACACGCGCATCTT
GGCCTCTATGCCTTCGTGAGCTTCGCGTTCTTTGGCGCGATCTACTTCATCGTGCCGCGTATCACCGGTCGCGAGTGGCC
GTACCGTTGGATGATCTATTGCCACTTCTGGCTGGCTGCCGGCGGGATCTGCGTCTACTTCGTCAGTCTGACCATTGGCG
GTTGGCTGCAGGGCATGGCCATGCTTGATGCCGCTCGTCCGTTCATGGATTCGGTGCAGGTGACCATTCCTTATCTGAAG
GCGCGGTCGGTGGGCGGCACGATGATGCTGGCCGGCCACCTTTGTCTTGTTGCGAACTTCGTATGCGCGATCTTCGGGTT
TGGTCCCAAGCGCGATCGTCCTGCGCTGTTTCACCAGGGCGGCAAGCCGGAGCAGGGAGTGGAAACATGA

Upstream 100 bases:

>100_bases
AACCGGGCTTCGGCCGTAAGCTCCGGCACCAGCACGTTTCATCGTTCGCCTCGAACTCACCAGCGGATTCACGTCGGATA
CGCGTTGCCTGCGAGTCTTC

Downstream 100 bases:

>100_bases
ACAACGAAAACGCACTGCTTGCAGGTGGCATGACGATGCTGGCGATCGCCACCAGCGCATTGGTCGTGATCCCGTACCTG
CAGTTGCACGACGTGAAGCC

Product: cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MNTVAILMSAFLLSVFALGAFIWSMRKGLFDTSPAAARVIFADEEAGHSEDPASARHGIVDRSREEADRSSAPVVFLFIC
CAMVWLLVASVAGLTASIKLHEPDLLASVPWLSFGRIRTIHLNAVAYGWAPMAGLGIAMFLLPRLLKTELMGGRWAVLGA
ALWNAGLIAGIGSIAAGISDGLEWLEIPWQVDILFVIGGAFVGFPLVLTLVNRKVDHLYVSVWYMGCALFWFPVLFLVAN
IPGLHFGVEQATMNWWFGHNVLGLFYTPLALASIYYFLPKIIGQPVRSYGLSLLGFWALAFFYGQVGGHHLVGGPVPGWL
ITLSIVQSMMMLIPVIAFSINQHQTLRGHFRQLIESPTLRFVTFGGMMYTLSSIQGSFEALRAVNRVTHFTHYTVAHAHL
GLYAFVSFAFFGAIYFIVPRITGREWPYRWMIYCHFWLAAGGICVYFVSLTIGGWLQGMAMLDAARPFMDSVQVTIPYLK
ARSVGGTMMLAGHLCLVANFVCAIFGFGPKRDRPALFHQGGKPEQGVET

Sequences:

>Translated_529_residues
MNTVAILMSAFLLSVFALGAFIWSMRKGLFDTSPAAARVIFADEEAGHSEDPASARHGIVDRSREEADRSSAPVVFLFIC
CAMVWLLVASVAGLTASIKLHEPDLLASVPWLSFGRIRTIHLNAVAYGWAPMAGLGIAMFLLPRLLKTELMGGRWAVLGA
ALWNAGLIAGIGSIAAGISDGLEWLEIPWQVDILFVIGGAFVGFPLVLTLVNRKVDHLYVSVWYMGCALFWFPVLFLVAN
IPGLHFGVEQATMNWWFGHNVLGLFYTPLALASIYYFLPKIIGQPVRSYGLSLLGFWALAFFYGQVGGHHLVGGPVPGWL
ITLSIVQSMMMLIPVIAFSINQHQTLRGHFRQLIESPTLRFVTFGGMMYTLSSIQGSFEALRAVNRVTHFTHYTVAHAHL
GLYAFVSFAFFGAIYFIVPRITGREWPYRWMIYCHFWLAAGGICVYFVSLTIGGWLQGMAMLDAARPFMDSVQVTIPYLK
ARSVGGTMMLAGHLCLVANFVCAIFGFGPKRDRPALFHQGGKPEQGVET
>Mature_529_residues
MNTVAILMSAFLLSVFALGAFIWSMRKGLFDTSPAAARVIFADEEAGHSEDPASARHGIVDRSREEADRSSAPVVFLFIC
CAMVWLLVASVAGLTASIKLHEPDLLASVPWLSFGRIRTIHLNAVAYGWAPMAGLGIAMFLLPRLLKTELMGGRWAVLGA
ALWNAGLIAGIGSIAAGISDGLEWLEIPWQVDILFVIGGAFVGFPLVLTLVNRKVDHLYVSVWYMGCALFWFPVLFLVAN
IPGLHFGVEQATMNWWFGHNVLGLFYTPLALASIYYFLPKIIGQPVRSYGLSLLGFWALAFFYGQVGGHHLVGGPVPGWL
ITLSIVQSMMMLIPVIAFSINQHQTLRGHFRQLIESPTLRFVTFGGMMYTLSSIQGSFEALRAVNRVTHFTHYTVAHAHL
GLYAFVSFAFFGAIYFIVPRITGREWPYRWMIYCHFWLAAGGICVYFVSLTIGGWLQGMAMLDAARPFMDSVQVTIPYLK
ARSVGGTMMLAGHLCLVANFVCAIFGFGPKRDRPALFHQGGKPEQGVET

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 58257; Mature: 58257

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS50855 COX1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVAILMSAFLLSVFALGAFIWSMRKGLFDTSPAAARVIFADEEAGHSEDPASARHGIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCC
DRSREEADRSSAPVVFLFICCAMVWLLVASVAGLTASIKLHEPDLLASVPWLSFGRIRTI
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHCCCCCCCCCEEEE
HLNAVAYGWAPMAGLGIAMFLLPRLLKTELMGGRWAVLGAALWNAGLIAGIGSIAAGISD
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLEWLEIPWQVDILFVIGGAFVGFPLVLTLVNRKVDHLYVSVWYMGCALFWFPVLFLVAN
CHHHHCCCCEEEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IPGLHFGVEQATMNWWFGHNVLGLFYTPLALASIYYFLPKIIGQPVRSYGLSLLGFWALA
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FFYGQVGGHHLVGGPVPGWLITLSIVQSMMMLIPVIAFSINQHQTLRGHFRQLIESPTLR
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEE
FVTFGGMMYTLSSIQGSFEALRAVNRVTHFTHYTVAHAHLGLYAFVSFAFFGAIYFIVPR
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ITGREWPYRWMIYCHFWLAAGGICVYFVSLTIGGWLQGMAMLDAARPFMDSVQVTIPYLK
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHH
ARSVGGTMMLAGHLCLVANFVCAIFGFGPKRDRPALFHQGGKPEQGVET
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCC
>Mature Secondary Structure
MNTVAILMSAFLLSVFALGAFIWSMRKGLFDTSPAAARVIFADEEAGHSEDPASARHGIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCC
DRSREEADRSSAPVVFLFICCAMVWLLVASVAGLTASIKLHEPDLLASVPWLSFGRIRTI
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHCCCCCCCCCEEEE
HLNAVAYGWAPMAGLGIAMFLLPRLLKTELMGGRWAVLGAALWNAGLIAGIGSIAAGISD
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLEWLEIPWQVDILFVIGGAFVGFPLVLTLVNRKVDHLYVSVWYMGCALFWFPVLFLVAN
CHHHHCCCCEEEEHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IPGLHFGVEQATMNWWFGHNVLGLFYTPLALASIYYFLPKIIGQPVRSYGLSLLGFWALA
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FFYGQVGGHHLVGGPVPGWLITLSIVQSMMMLIPVIAFSINQHQTLRGHFRQLIESPTLR
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEE
FVTFGGMMYTLSSIQGSFEALRAVNRVTHFTHYTVAHAHLGLYAFVSFAFFGAIYFIVPR
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ITGREWPYRWMIYCHFWLAAGGICVYFVSLTIGGWLQGMAMLDAARPFMDSVQVTIPYLK
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHH
ARSVGGTMMLAGHLCLVANFVCAIFGFGPKRDRPALFHQGGKPEQGVET
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]