| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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Identifier: 94313130
GI number: 94313130
Start: 787634
End: 788641
Strand: Direct
Name: bug
Synonym: Rmet_4203
Alternate gene names: NA
Gene position: 787634-788641 (Clockwise)
Preceding gene: 94313128
Following gene: 94313131
Centisome position: 30.53
GC content: 65.48
Gene sequence:
>1008_bases ATGCTGCGCGGGCTCGCTCGTATTCATGCTTTGCAGGGCGGGAGCCGCCCGATTCTGGCCGCAATGCTAGCCACCGCGCT GGCAATCGGCGCCCAGACGGCCCGTGCCGACGCATATCCCGACCACCCAATCCGGCTGGTCGTGCCGTATGCGGCGGGCG GCGCGGTCGATATCGTGGCTCGCTCGGTTGGCCAGCGAATGAGCCAGCAACTCAAGCAGCCGATCATCGTCGATAACCGC CCCGGCGCCAGCACCAATATCGGCATGGATTTCGTGGCCAAGGCCTCGGCCGACGGCTACACGATCATGATGGCATCGAA CAGCCTGGCGACGAACGCGGCGCTGTTCAACAAGCTCAGCTTCAACCCGGCCACGGATTTCGCGCCAGTGGCGCGGATTG GCGAGGCTTCGCTGGTGGTGGTGGTGCCGGCCAAGTCGAGCATCACGTCGATGAAGGGGCTGATCGCCCAAGCCAAGGCG GAACCGGGCAAGCTTAGCTTCGGTTCGGCCGGCAACGGCAGTTCGGGCCACCTTGCAGGCGAAATGCTCAAGGAGTCCGC CGGCATCGACGTGCTGCACGTTCCATACAAAGGCGGCGCGCCCGCCATTACCGACCTGATCGGCGAACGCCTGACGTTCA TGCCGATCAATCCGCTTGAAGTGATCAGCCATATCAAGTCCGGCACGTTGCGGCCGCTGGCGGTGGCCAGCGCCAGCCGT TCGGCGTTGCTGCCCAATGTCCCGACCTCGAAGGAGGAAGGGCTGCCCGCCTTCACCGCCTCGGTCTGGTGGGGACTCGT TGCGCCCGCCAAGACGCCCGCGCCGGTCGTCAAGGCGCTGAACACGGCGGCCAACGCCGCGTTGAACGATGCCGACGTGC GCAAGCAGCTTGGTCAGCTCGGTGTGACGATCGTCTCGGGCACGCCCGAGCAGTTCGGCCAGTTCATCCGCTCGGAAACC ACGACCTGGACCGGGGTAATCCGCAAGGCCGGGATTACCGCCGACTAA
Upstream 100 bases:
>100_bases TGATACGAATTCGAAATAACGAGCCACCTGAAAACATATTGGACAGTATCACGGCCCGCGCCGAGAATGTGCCAGGAGAT CAATAACATCTGGAGACATC
Downstream 100 bases:
>100_bases GTGGCCGGCTGAGCGCCCAACTGAGCGGCTGATCGAGGCCACATCCGGGCGCCCGACTGCGTCCATTTTCTCGAAAACGT CTTTCGTATTGCCATGTCCG
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MLRGLARIHALQGGSRPILAAMLATALAIGAQTARADAYPDHPIRLVVPYAAGGAVDIVARSVGQRMSQQLKQPIIVDNR PGASTNIGMDFVAKASADGYTIMMASNSLATNAALFNKLSFNPATDFAPVARIGEASLVVVVPAKSSITSMKGLIAQAKA EPGKLSFGSAGNGSSGHLAGEMLKESAGIDVLHVPYKGGAPAITDLIGERLTFMPINPLEVISHIKSGTLRPLAVASASR SALLPNVPTSKEEGLPAFTASVWWGLVAPAKTPAPVVKALNTAANAALNDADVRKQLGQLGVTIVSGTPEQFGQFIRSET TTWTGVIRKAGITAD
Sequences:
>Translated_335_residues MLRGLARIHALQGGSRPILAAMLATALAIGAQTARADAYPDHPIRLVVPYAAGGAVDIVARSVGQRMSQQLKQPIIVDNR PGASTNIGMDFVAKASADGYTIMMASNSLATNAALFNKLSFNPATDFAPVARIGEASLVVVVPAKSSITSMKGLIAQAKA EPGKLSFGSAGNGSSGHLAGEMLKESAGIDVLHVPYKGGAPAITDLIGERLTFMPINPLEVISHIKSGTLRPLAVASASR SALLPNVPTSKEEGLPAFTASVWWGLVAPAKTPAPVVKALNTAANAALNDADVRKQLGQLGVTIVSGTPEQFGQFIRSET TTWTGVIRKAGITAD >Mature_335_residues MLRGLARIHALQGGSRPILAAMLATALAIGAQTARADAYPDHPIRLVVPYAAGGAVDIVARSVGQRMSQQLKQPIIVDNR PGASTNIGMDFVAKASADGYTIMMASNSLATNAALFNKLSFNPATDFAPVARIGEASLVVVVPAKSSITSMKGLIAQAKA EPGKLSFGSAGNGSSGHLAGEMLKESAGIDVLHVPYKGGAPAITDLIGERLTFMPINPLEVISHIKSGTLRPLAVASASR SALLPNVPTSKEEGLPAFTASVWWGLVAPAKTPAPVVKALNTAANAALNDADVRKQLGQLGVTIVSGTPEQFGQFIRSET TTWTGVIRKAGITAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34559; Mature: 34559
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGLARIHALQGGSRPILAAMLATALAIGAQTARADAYPDHPIRLVVPYAAGGAVDIVA CCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEECCCCHHHHHH RSVGQRMSQQLKQPIIVDNRPGASTNIGMDFVAKASADGYTIMMASNSLATNAALFNKLS HHHHHHHHHHHCCCEEEECCCCCCCCCCHHHEEECCCCCEEEEEECCCCHHHHHHHHCCC FNPATDFAPVARIGEASLVVVVPAKSSITSMKGLIAQAKAEPGKLSFGSAGNGSSGHLAG CCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHH EMLKESAGIDVLHVPYKGGAPAITDLIGERLTFMPINPLEVISHIKSGTLRPLAVASASR HHHHHHCCCEEEECCCCCCCCHHHHHHHCCEEEECCCHHHHHHHHHCCCCCCEEECCCCC SALLPNVPTSKEEGLPAFTASVWWGLVAPAKTPAPVVKALNTAANAALNDADVRKQLGQL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC GVTIVSGTPEQFGQFIRSETTTWTGVIRKAGITAD CEEEEECCHHHHHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure MLRGLARIHALQGGSRPILAAMLATALAIGAQTARADAYPDHPIRLVVPYAAGGAVDIVA CCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEEECCCCHHHHHH RSVGQRMSQQLKQPIIVDNRPGASTNIGMDFVAKASADGYTIMMASNSLATNAALFNKLS HHHHHHHHHHHCCCEEEECCCCCCCCCCHHHEEECCCCCEEEEEECCCCHHHHHHHHCCC FNPATDFAPVARIGEASLVVVVPAKSSITSMKGLIAQAKAEPGKLSFGSAGNGSSGHLAG CCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHH EMLKESAGIDVLHVPYKGGAPAITDLIGERLTFMPINPLEVISHIKSGTLRPLAVASASR HHHHHHCCCEEEECCCCCCCCHHHHHHHCCEEEECCCHHHHHHHHHCCCCCCEEECCCCC SALLPNVPTSKEEGLPAFTASVWWGLVAPAKTPAPVVKALNTAANAALNDADVRKQLGQL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC GVTIVSGTPEQFGQFIRSETTTWTGVIRKAGITAD CEEEEECCHHHHHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]