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The map label for this gene is viuB [H]

Identifier: 94313126

GI number: 94313126

Start: 783903

End: 784715

Strand: Direct

Name: viuB [H]

Synonym: Rmet_4199

Alternate gene names: 94313126

Gene position: 783903-784715 (Clockwise)

Preceding gene: 94313125

Following gene: 94313127

Centisome position: 30.38

GC content: 66.42

Gene sequence:

>813_bases
ATGAATGACGACCGCAATCTGACAGTCGAGCGCGTCCGCCATCCGCTCAAGATGCGCCTGCTCAAGGTGTTGCGCACGCA
CCGGGTATCGCCGCAGTTGCTGCGCGTGACACTGGGCGGCGAAGACCTCGCGGACTTCGTCTCCGGCTCGTTCGACGATC
ACATCAAGGTGTTCTTCCCGCCCGCGGGAGCGGAAAAGCCTGCGTTGCCAGAAGTGGGGGCCGACGGCATCCGTTTTCCG
GAAGGGCAGCCCCGGCCAGAGACACGCGACTACACGCCCCGCCGATACGACAACGCAGCCGGCGAACTCGACATCGAGTT
CGTGCTGCATGGCGACGGGCCTGCTTCCACCTGGGCGGCGCAAGCGCAGCCGGGCCAGTATCTCGGCGTGGGCGGCCCAC
GCGGTTCGTTCGTGATCCCGCACGGGTTCGACTGGCATCTGCTGATCGGCGACGACACTGCGCTGCCGGCCATGGCTCGC
CGTATCGAGGAGCTGGGCCCGGACGCCCGTGTGATCGTGGTGGCGGAAGTGTCGGATGCCTCGGCGCAGATTCCGCTCGC
GACCGGGCCAAATGCGCAAGTGCATTGGGTTCACCGCGAAGGCCGACCCGAGGGTAGCCAGCTTGCGCCGACGCTTCGCT
GGCTCAGTTTGCCGCAGGGCGAAGGCTACGTCTGGGCTGCTGGCGAGGCCGCCGCGATGCGCGAGGTGCGCCAGTATCTG
GTGGGCGAGCGCGGCATCGACAAGTCGCGTATTCGCGCATCGGCTTACTGGAAACGCGGCAATGCGGCGGTGCATGAAAC
GATCGATGACTGA

Upstream 100 bases:

>100_bases
CGCTGGCGCTTCGCAGCGGTGCGTCTCCAGACGAACAGCGCCGGATTGCCGCCATCCTGAACCGCGCGGCGGATGACATC
GAATCGGGAGACCAGAACGC

Downstream 100 bases:

>100_bases
AGAGTTGAATCGCGACATCTGAAATTTTTCGTCGCGGGCTCCGGCAGGGGCGTGGCGCGGATACACTAATCGCCACGCTC
ATCGACACAGGGATCTGCCA

Product: FAD-binding 9, siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MNDDRNLTVERVRHPLKMRLLKVLRTHRVSPQLLRVTLGGEDLADFVSGSFDDHIKVFFPPAGAEKPALPEVGADGIRFP
EGQPRPETRDYTPRRYDNAAGELDIEFVLHGDGPASTWAAQAQPGQYLGVGGPRGSFVIPHGFDWHLLIGDDTALPAMAR
RIEELGPDARVIVVAEVSDASAQIPLATGPNAQVHWVHREGRPEGSQLAPTLRWLSLPQGEGYVWAAGEAAAMREVRQYL
VGERGIDKSRIRASAYWKRGNAAVHETIDD

Sequences:

>Translated_270_residues
MNDDRNLTVERVRHPLKMRLLKVLRTHRVSPQLLRVTLGGEDLADFVSGSFDDHIKVFFPPAGAEKPALPEVGADGIRFP
EGQPRPETRDYTPRRYDNAAGELDIEFVLHGDGPASTWAAQAQPGQYLGVGGPRGSFVIPHGFDWHLLIGDDTALPAMAR
RIEELGPDARVIVVAEVSDASAQIPLATGPNAQVHWVHREGRPEGSQLAPTLRWLSLPQGEGYVWAAGEAAAMREVRQYL
VGERGIDKSRIRASAYWKRGNAAVHETIDD
>Mature_270_residues
MNDDRNLTVERVRHPLKMRLLKVLRTHRVSPQLLRVTLGGEDLADFVSGSFDDHIKVFFPPAGAEKPALPEVGADGIRFP
EGQPRPETRDYTPRRYDNAAGELDIEFVLHGDGPASTWAAQAQPGQYLGVGGPRGSFVIPHGFDWHLLIGDDTALPAMAR
RIEELGPDARVIVVAEVSDASAQIPLATGPNAQVHWVHREGRPEGSQLAPTLRWLSLPQGEGYVWAAGEAAAMREVRQYL
VGERGIDKSRIRASAYWKRGNAAVHETIDD

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=251, Percent_Identity=39.4422310756972, Blast_Score=166, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 29698; Mature: 29698

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDDRNLTVERVRHPLKMRLLKVLRTHRVSPQLLRVTLGGEDLADFVSGSFDDHIKVFFP
CCCCCCEEHHHHHCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCCEEEEEC
PAGAEKPALPEVGADGIRFPEGQPRPETRDYTPRRYDNAAGELDIEFVLHGDGPASTWAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
QAQPGQYLGVGGPRGSFVIPHGFDWHLLIGDDTALPAMARRIEELGPDARVIVVAEVSDA
CCCCCCEEECCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCC
SAQIPLATGPNAQVHWVHREGRPEGSQLAPTLRWLSLPQGEGYVWAAGEAAAMREVRQYL
CCEEEEECCCCCEEEEEECCCCCCCCHHCHHHHEEECCCCCCEEEECCCHHHHHHHHHHH
VGERGIDKSRIRASAYWKRGNAAVHETIDD
HCCCCCCHHHHHHHHHEECCCCEEECCCCC
>Mature Secondary Structure
MNDDRNLTVERVRHPLKMRLLKVLRTHRVSPQLLRVTLGGEDLADFVSGSFDDHIKVFFP
CCCCCCEEHHHHHCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCCEEEEEC
PAGAEKPALPEVGADGIRFPEGQPRPETRDYTPRRYDNAAGELDIEFVLHGDGPASTWAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
QAQPGQYLGVGGPRGSFVIPHGFDWHLLIGDDTALPAMARRIEELGPDARVIVVAEVSDA
CCCCCCEEECCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCC
SAQIPLATGPNAQVHWVHREGRPEGSQLAPTLRWLSLPQGEGYVWAAGEAAAMREVRQYL
CCEEEEECCCCCEEEEEECCCCCCCCHHCHHHHEEECCCCCCEEEECCCHHHHHHHHHHH
VGERGIDKSRIRASAYWKRGNAAVHETIDD
HCCCCCCHHHHHHHHHEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]