| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is yfhR [C]
Identifier: 94313113
GI number: 94313113
Start: 769461
End: 770330
Strand: Reverse
Name: yfhR [C]
Synonym: Rmet_4186
Alternate gene names: 94313113
Gene position: 770330-769461 (Counterclockwise)
Preceding gene: 94313116
Following gene: 94313111
Centisome position: 29.86
GC content: 66.32
Gene sequence:
>870_bases ATGCCGCCCCCAAAAGCGTCCCCCGCCCCCAATTCGTACCGGCGTTGGCTGGTTGGCGCCGCAGGGCTGGCTGGTGTGGC GCTGCTGGCCGGCGTCGGACGGCTAATACTGTTCCGCGCAATCGAACGGGAAGCGTTCGTTCCGGCCCCGGGCGGCACGG CAAGGCCAGACGATTTCGGCGTTGCATCGCGCCAGTTTGCATTCGCAAGCGGCAACCGCATGTTGCGTGGCTCATACGTC GCGGCCTCGCCCGACGCGCCCGCACTGTCCGTATTTCATGGTGACGAGGAATGCCTGGCCGACTGGGCACCCGTCCAGGC GCTATTGCACGCCGCAGGCATCAGTTCCTTCGTCTTCGATTACAGCGGCTATGGCGCCAGCACGGGCCGGCCTTCCGTTC GCCACCTGCACCAGGACGCCCTGGCTGCCTATGCCCAGTTCCGCGCAGTTACACCAAAGGCGTCGCGGCACTATGTCATG GCGCACTCGCTCGGTAGCGGCGTATTGCTGGATGTTGTGGGCGATCTGGCGCCGGCACCCGATGGCATGGTCATCGGCGC CGGATTCCGCTCTGCGCGTGCCGCCGCAGTCGTCACTGGCCGGGTGCCGCGCTGGCTCGCCTGGATGTTGCCGGACCCAT GGAATAACATCCGGCAAATCCGGAATCTGACCATGCCCATCCTGCTGCTGCACAGCAAGCGGGATGAGACGATCCCGTTC CGGGATGCCGAATGCCTGGCCCGGGCCGCGCACGGGCCCCGGCGGCTGGAAGCCTTCGAGGACCTTCCGCATGACGCGGC GATCGAGCCCTCCTACATGACCCGTTTCTGGGCGCCAGTGATCGCCTACCTGAAGAGCGGGAAGCTCTGA
Upstream 100 bases:
>100_bases TAAAGTTGAGGAAAATCCTCTTCTGAAGCCTGCCGATACTTTCCCGACGGGCCTTGCAGGTGATAGGGTTACTCACCCCT GCCGACAGTCGAGCATCGCA
Downstream 100 bases:
>100_bases CGGCGATAAGCGACAGGCTACAGCTTGAACTCGCCCACCACTTTCTGAAGCTCCTGCGCCTGCTCGGCCAGCGCCGACGA AGCCGCAGCCGCCTGTTCGA
Product: putative hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MPPPKASPAPNSYRRWLVGAAGLAGVALLAGVGRLILFRAIEREAFVPAPGGTARPDDFGVASRQFAFASGNRMLRGSYV AASPDAPALSVFHGDEECLADWAPVQALLHAAGISSFVFDYSGYGASTGRPSVRHLHQDALAAYAQFRAVTPKASRHYVM AHSLGSGVLLDVVGDLAPAPDGMVIGAGFRSARAAAVVTGRVPRWLAWMLPDPWNNIRQIRNLTMPILLLHSKRDETIPF RDAECLARAAHGPRRLEAFEDLPHDAAIEPSYMTRFWAPVIAYLKSGKL
Sequences:
>Translated_289_residues MPPPKASPAPNSYRRWLVGAAGLAGVALLAGVGRLILFRAIEREAFVPAPGGTARPDDFGVASRQFAFASGNRMLRGSYV AASPDAPALSVFHGDEECLADWAPVQALLHAAGISSFVFDYSGYGASTGRPSVRHLHQDALAAYAQFRAVTPKASRHYVM AHSLGSGVLLDVVGDLAPAPDGMVIGAGFRSARAAAVVTGRVPRWLAWMLPDPWNNIRQIRNLTMPILLLHSKRDETIPF RDAECLARAAHGPRRLEAFEDLPHDAAIEPSYMTRFWAPVIAYLKSGKL >Mature_288_residues PPPKASPAPNSYRRWLVGAAGLAGVALLAGVGRLILFRAIEREAFVPAPGGTARPDDFGVASRQFAFASGNRMLRGSYVA ASPDAPALSVFHGDEECLADWAPVQALLHAAGISSFVFDYSGYGASTGRPSVRHLHQDALAAYAQFRAVTPKASRHYVMA HSLGSGVLLDVVGDLAPAPDGMVIGAGFRSARAAAVVTGRVPRWLAWMLPDPWNNIRQIRNLTMPILLLHSKRDETIPFR DAECLARAAHGPRRLEAFEDLPHDAAIEPSYMTRFWAPVIAYLKSGKL
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510965, Length=219, Percent_Identity=27.3972602739726, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31115; Mature: 30984
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPKASPAPNSYRRWLVGAAGLAGVALLAGVGRLILFRAIEREAFVPAPGGTARPDDFG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC VASRQFAFASGNRMLRGSYVAASPDAPALSVFHGDEECLADWAPVQALLHAAGISSFVFD CCCCEEEEECCCEEEECCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH YSGYGASTGRPSVRHLHQDALAAYAQFRAVTPKASRHYVMAHSLGSGVLLDVVGDLAPAP CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCC DGMVIGAGFRSARAAAVVTGRVPRWLAWMLPDPWNNIRQIRNLTMPILLLHSKRDETIPF CCEEEECCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCC RDAECLARAAHGPRRLEAFEDLPHDAAIEPSYMTRFWAPVIAYLKSGKL CCHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PPPKASPAPNSYRRWLVGAAGLAGVALLAGVGRLILFRAIEREAFVPAPGGTARPDDFG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC VASRQFAFASGNRMLRGSYVAASPDAPALSVFHGDEECLADWAPVQALLHAAGISSFVFD CCCCEEEEECCCEEEECCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH YSGYGASTGRPSVRHLHQDALAAYAQFRAVTPKASRHYVMAHSLGSGVLLDVVGDLAPAP CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCC DGMVIGAGFRSARAAAVVTGRVPRWLAWMLPDPWNNIRQIRNLTMPILLLHSKRDETIPF CCEEEECCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCC RDAECLARAAHGPRRLEAFEDLPHDAAIEPSYMTRFWAPVIAYLKSGKL CCHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA