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The map label for this gene is yagI [C]

Identifier: 94313069

GI number: 94313069

Start: 716423

End: 717199

Strand: Direct

Name: yagI [C]

Synonym: Rmet_4142

Alternate gene names: 94313069

Gene position: 716423-717199 (Clockwise)

Preceding gene: 94313067

Following gene: 94313070

Centisome position: 27.77

GC content: 68.6

Gene sequence:

>777_bases
ATGCCCCGCAAAGCCGCCCAACTCTCCGAAGCCGACAAGCACGCCGCTGAAGGTGGTGCCGTCGCCGTGGATCGGGCGTT
GTTCGTGCTGTCGGCTTTCCGGGAAGGCGACGGGACGTTGGGGCTGGCCGAACTCGCGCAACGCAGCGGCCTGTACAAGA
GCACGCTGCTGCGGCTGCTGGCGTCGCTGGAGCACGCGCGGCTGATCCAGCGTCATACGGATGGACGCTATGGGCTCGGC
CCCGAGATCGCACGGCTTAATGCGGTCTACGCGGCGTCGTTCTCGCTCGAGCAGGTCGTGTTGCCGGCGTTGCGCGAACT
GGTGCGCACCACGCGCGAATCGGCCGCGTTCCACATCCAGCAGGGGGAACACCGGCTCTGCCTTTATCGCGTGGACTCCC
CGCAGCCGGTGCGCGACCACATTCGTGCCGGCGATCTGCTGCCGCTCAATCGCGGCGCCGGCGGCCGTGTGCTGCGCGCT
TTCGCCGGCGCGCGCGGAGAGATTTATCAGCGTATCCGTGACGAAGGCGTAATCGCGCTGGTGGGCGACCGCAGCCCCGA
CATCGCGGGCGTGTCGTCGCCGGTGTTCGGGCCCGGTGGGGAATTGAAGGGCGCCTTGACGCTGACCTGCCCGACGCCGC
GCTTCTCCGAATCGTTCCGCGAACAGGTACTCGATGCCGCGCGGCGGCTGACGCAGGCGCTTGGCGGGATTTTCCCGGAG
GTCGTCGAAGCCGCCGGACCCTCATCCTCGGCGGCAACTGCCCCGCAGGACGACTGA

Upstream 100 bases:

>100_bases
GGGCGCGGTCCGTGCGGCGTGTTGGCGTGCAGATTGACATTGATTTTGCCGTTCTATACCGTGGACGCCCGTTCCATGCC
ACGTCCTCGACGCTTTCTCC

Downstream 100 bases:

>100_bases
GTATCCCCCGGCTTGTCGGGGGTGCCGCTCGGTGACCCGCGCGGGATAAGATGCGTGCTTTCGTGCCGACGATAGCAACA
GGGGCTACCCGTCAAGGGTA

Product: putative IclR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator IclR Family; Transcriptional Regulator; Transcriptional Regulator IclR; Regulatory Protein IclR; IclR Family Regulatory Protein; Regulatory Proteins IclR; IclR-Type Transcriptional Regulator; Leucine And Tryptophan Biosynthesis Regulator; Transcriptional Regulator Family Protein; IclR-Family Transcriptional Regulator; IclR Transcriptional Regulator; Regulatory Protein Containing IclR Domain; Transcriptional Regulator IclR Family Protein; IclR Family Transcriptional Regulator Family; IclR-Family Regulatory Protein; Transcriptional Regulatory Protein; Iclr Family Transcriptional Regulator; Transcriptional Regulator IclR-Like Protein; IclR Helix-Turn-Helix Domain Family; IclR Family Protein Transcriptional Regulator

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MPRKAAQLSEADKHAAEGGAVAVDRALFVLSAFREGDGTLGLAELAQRSGLYKSTLLRLLASLEHARLIQRHTDGRYGLG
PEIARLNAVYAASFSLEQVVLPALRELVRTTRESAAFHIQQGEHRLCLYRVDSPQPVRDHIRAGDLLPLNRGAGGRVLRA
FAGARGEIYQRIRDEGVIALVGDRSPDIAGVSSPVFGPGGELKGALTLTCPTPRFSESFREQVLDAARRLTQALGGIFPE
VVEAAGPSSSAATAPQDD

Sequences:

>Translated_258_residues
MPRKAAQLSEADKHAAEGGAVAVDRALFVLSAFREGDGTLGLAELAQRSGLYKSTLLRLLASLEHARLIQRHTDGRYGLG
PEIARLNAVYAASFSLEQVVLPALRELVRTTRESAAFHIQQGEHRLCLYRVDSPQPVRDHIRAGDLLPLNRGAGGRVLRA
FAGARGEIYQRIRDEGVIALVGDRSPDIAGVSSPVFGPGGELKGALTLTCPTPRFSESFREQVLDAARRLTQALGGIFPE
VVEAAGPSSSAATAPQDD
>Mature_257_residues
PRKAAQLSEADKHAAEGGAVAVDRALFVLSAFREGDGTLGLAELAQRSGLYKSTLLRLLASLEHARLIQRHTDGRYGLGP
EIARLNAVYAASFSLEQVVLPALRELVRTTRESAAFHIQQGEHRLCLYRVDSPQPVRDHIRAGDLLPLNRGAGGRVLRAF
AGARGEIYQRIRDEGVIALVGDRSPDIAGVSSPVFGPGGELKGALTLTCPTPRFSESFREQVLDAARRLTQALGGIFPEV
VEAAGPSSSAATAPQDD

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786468, Length=244, Percent_Identity=26.6393442622951, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27596; Mature: 27464

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKAAQLSEADKHAAEGGAVAVDRALFVLSAFREGDGTLGLAELAQRSGLYKSTLLRLL
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHH
ASLEHARLIQRHTDGRYGLGPEIARLNAVYAASFSLEQVVLPALRELVRTTRESAAFHIQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
QGEHRLCLYRVDSPQPVRDHIRAGDLLPLNRGAGGRVLRAFAGARGEIYQRIRDEGVIAL
CCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCEEEE
VGDRSPDIAGVSSPVFGPGGELKGALTLTCPTPRFSESFREQVLDAARRLTQALGGIFPE
ECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
VVEAAGPSSSAATAPQDD
HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRKAAQLSEADKHAAEGGAVAVDRALFVLSAFREGDGTLGLAELAQRSGLYKSTLLRLL
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHH
ASLEHARLIQRHTDGRYGLGPEIARLNAVYAASFSLEQVVLPALRELVRTTRESAAFHIQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
QGEHRLCLYRVDSPQPVRDHIRAGDLLPLNRGAGGRVLRAFAGARGEIYQRIRDEGVIAL
CCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCEEEE
VGDRSPDIAGVSSPVFGPGGELKGALTLTCPTPRFSESFREQVLDAARRLTQALGGIFPE
ECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
VVEAAGPSSSAATAPQDD
HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA