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The map label for this gene is omp32 [H]

Identifier: 94313024

GI number: 94313024

Start: 664564

End: 665688

Strand: Reverse

Name: omp32 [H]

Synonym: Rmet_4097

Alternate gene names: 94313024

Gene position: 665688-664564 (Counterclockwise)

Preceding gene: 291481513

Following gene: 94313019

Centisome position: 25.8

GC content: 63.56

Gene sequence:

>1125_bases
ATGACAAGAGTTGGCGTGTGGCACTGGATGCGCCCCCTGGCGACGATAGCGGCGCTATCGGCCTCGGCCACCTGCCTGGT
CGGCACGGCCAACGCCCAGTCATCCGTTGTGATTTACGGGCGACTCAATACGGCCGTCGAGTACGCGTCAGCCTCCACCG
CGACCGACGGCACCCACCTGGGCGGCACTGCGCGGCTGACCAACAACCGGTCCGTCTTCGGTATTCGCGGCGAGGAAGCG
CTCGGGTATGGGCTCAAGGCCATCTGGCAGGTCGAGAGCACGCTGTCGATCGACACCGGCGCGGGGCAGATCGCCGCACG
CGACACGCGGCTCGGCATGGCCAGCCCGTATGGCACCGTATTCATGGGCAACTGGGATACGGCCTATACCACTTCGACCA
AGACCCTCGACCCCTACTACCCGACCACCGCCGGCTATATGTCGATCATGGGCAATGGCGCGGCCGCCACCACGGACAAC
GTCCAGAACACCAACTCGTTCGACCGGCGCCAGCAGAACTCCCTGCATTACCAGTCGCCGCAATGGCACGGGTTAAGCGG
CGCGATGACCTGGGGCCTGCCGGAAGAAAAGATCAGCGTGCCGCGCAATCCGGCGTTGTACTCGTTTGCGGGCGCGTACG
AACGCGGCCCGCTCAGTGTGTCGATGGCCTACGAGATCCATCAGCACTATCAGACCGCCGGCCGTAACGACGATGGCATG
AAGGTCGGCGTCTCCTACCAGTTCCCCACGACGACGATCGCCCTGGTGTACGAGCGATTGCACTATCGCACCGCCACCGG
CGACCTGGCGCGCAACAGCTACTACACCTCACTGGTCCAGAAGCTCGGACCCGGCAGCGTGAAGATCGGCTTCACGTTCG
CCAGCAACGGCACGGGCAATGCGACCGAGACAATCGGTTCATTCCATGCCGGCCCCGAAACCGGCGCCACGCAGATCACT
GTCGGCTACGACTATCCGCTTTCCAAGCGCACGTCGATCTATACCTACTACAGCCGGATCAACAACAAGCGGAACGCCCT
CTATGACTTCGCCATCAACGGCCTGGGCGTGAAGGCCGGCGCCGATCCACAGACCTTCGCGCTGGCCATGCGGCATAACT
TCTAG

Upstream 100 bases:

>100_bases
GCCATGATTCCCTTCTAATGGTCCCTCTATCGATCAGCGTCGATTCCCGTCCGTGCGACGCTTCACTACTATAGGAATCA
AACCAACGGGGGAGCGCGAG

Downstream 100 bases:

>100_bases
CACCCGAGCGCGCCGGGAACGCATGTCGCTTCCTTCCCGCCATGGGCGAAAAGGAAGCGACGCACGGCAAGGCGCCCCCC
TGTCCGACTGCCTCCGGCAG

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTRVGVWHWMRPLATIAALSASATCLVGTANAQSSVVIYGRLNTAVEYASASTATDGTHLGGTARLTNNRSVFGIRGEEA
LGYGLKAIWQVESTLSIDTGAGQIAARDTRLGMASPYGTVFMGNWDTAYTTSTKTLDPYYPTTAGYMSIMGNGAAATTDN
VQNTNSFDRRQQNSLHYQSPQWHGLSGAMTWGLPEEKISVPRNPALYSFAGAYERGPLSVSMAYEIHQHYQTAGRNDDGM
KVGVSYQFPTTTIALVYERLHYRTATGDLARNSYYTSLVQKLGPGSVKIGFTFASNGTGNATETIGSFHAGPETGATQIT
VGYDYPLSKRTSIYTYYSRINNKRNALYDFAINGLGVKAGADPQTFALAMRHNF

Sequences:

>Translated_374_residues
MTRVGVWHWMRPLATIAALSASATCLVGTANAQSSVVIYGRLNTAVEYASASTATDGTHLGGTARLTNNRSVFGIRGEEA
LGYGLKAIWQVESTLSIDTGAGQIAARDTRLGMASPYGTVFMGNWDTAYTTSTKTLDPYYPTTAGYMSIMGNGAAATTDN
VQNTNSFDRRQQNSLHYQSPQWHGLSGAMTWGLPEEKISVPRNPALYSFAGAYERGPLSVSMAYEIHQHYQTAGRNDDGM
KVGVSYQFPTTTIALVYERLHYRTATGDLARNSYYTSLVQKLGPGSVKIGFTFASNGTGNATETIGSFHAGPETGATQIT
VGYDYPLSKRTSIYTYYSRINNKRNALYDFAINGLGVKAGADPQTFALAMRHNF
>Mature_373_residues
TRVGVWHWMRPLATIAALSASATCLVGTANAQSSVVIYGRLNTAVEYASASTATDGTHLGGTARLTNNRSVFGIRGEEAL
GYGLKAIWQVESTLSIDTGAGQIAARDTRLGMASPYGTVFMGNWDTAYTTSTKTLDPYYPTTAGYMSIMGNGAAATTDNV
QNTNSFDRRQQNSLHYQSPQWHGLSGAMTWGLPEEKISVPRNPALYSFAGAYERGPLSVSMAYEIHQHYQTAGRNDDGMK
VGVSYQFPTTTIALVYERLHYRTATGDLARNSYYTSLVQKLGPGSVKIGFTFASNGTGNATETIGSFHAGPETGATQITV
GYDYPLSKRTSIYTYYSRINNKRNALYDFAINGLGVKAGADPQTFALAMRHNF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40455; Mature: 40323

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVGVWHWMRPLATIAALSASATCLVGTANAQSSVVIYGRLNTAVEYASASTATDGTHL
CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCEEECCCCCCCCCCCCC
GGTARLTNNRSVFGIRGEEALGYGLKAIWQVESTLSIDTGAGQIAARDTRLGMASPYGTV
CCEEEEECCCEEEEECCCHHHCCCCEEEEEECCEEEEECCCCCEEEECCCCCCCCCCCEE
FMGNWDTAYTTSTKTLDPYYPTTAGYMSIMGNGAAATTDNVQNTNSFDRRQQNSLHYQSP
EECCCCCEEECCCCCCCCCCCCCCHHHHEECCCCEECCCCCCCCCCHHHHHHCCCCCCCC
QWHGLSGAMTWGLPEEKISVPRNPALYSFAGAYERGPLSVSMAYEIHQHYQTAGRNDDGM
CCCCCCCEEECCCCHHHHCCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCC
KVGVSYQFPTTTIALVYERLHYRTATGDLARNSYYTSLVQKLGPGSVKIGFTFASNGTGN
EEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
ATETIGSFHAGPETGATQITVGYDYPLSKRTSIYTYYSRINNKRNALYDFAINGLGVKAG
HHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEHHHCCCCCEEEEEEECCEEEECC
ADPQTFALAMRHNF
CCCHHEEEEEECCC
>Mature Secondary Structure 
TRVGVWHWMRPLATIAALSASATCLVGTANAQSSVVIYGRLNTAVEYASASTATDGTHL
CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCEEECCCCCCCCCCCCC
GGTARLTNNRSVFGIRGEEALGYGLKAIWQVESTLSIDTGAGQIAARDTRLGMASPYGTV
CCEEEEECCCEEEEECCCHHHCCCCEEEEEECCEEEEECCCCCEEEECCCCCCCCCCCEE
FMGNWDTAYTTSTKTLDPYYPTTAGYMSIMGNGAAATTDNVQNTNSFDRRQQNSLHYQSP
EECCCCCEEECCCCCCCCCCCCCCHHHHEECCCCEECCCCCCCCCCHHHHHHCCCCCCCC
QWHGLSGAMTWGLPEEKISVPRNPALYSFAGAYERGPLSVSMAYEIHQHYQTAGRNDDGM
CCCCCCCEEECCCCHHHHCCCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCC
KVGVSYQFPTTTIALVYERLHYRTATGDLARNSYYTSLVQKLGPGSVKIGFTFASNGTGN
EEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
ATETIGSFHAGPETGATQITVGYDYPLSKRTSIYTYYSRINNKRNALYDFAINGLGVKAG
HHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEHHHCCCCCEEEEEEECCEEEECC
ADPQTFALAMRHNF
CCCHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]