| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is bcsP31 [H]
Identifier: 94313005
GI number: 94313005
Start: 645292
End: 646635
Strand: Reverse
Name: bcsP31 [H]
Synonym: Rmet_4077
Alternate gene names: 94313005
Gene position: 646635-645292 (Counterclockwise)
Preceding gene: 291481507
Following gene: 94313004
Centisome position: 25.06
GC content: 60.86
Gene sequence:
>1344_bases ATGTCTAGGCGCGATCCGGCGCTTCGCCGCAGCCAGAATCCGCCCATGTCGGCGGGCCGCCGGCGCCTCCTTATTGCTGG AGGCATCCTGCTGCTGGTCGCACTGGGCTGGTCACTGGTAGCTGTCATCCGGCCCGCCATCCAGCATACGATCATCATCA CGACCGGTGCGGACAAGGGCATCTATCAAGGTTTCGCGGATCGCTACGCGACCATCCTGAAACGCGATGGCATCAAGCTC GAGATTCGCAGTTCGTCCGGTTCGATCGAGAACTACGAGCGGCTGAAGAATCCGGATAGTGCGTACGAGGTGGGGTTCAT CCAATCGGGCACGGTCAGCCCGAGCGATACCGACGGGCTGCAGACCATTGCCGCCGTCGCCTATGAACCGATCTGGGTGT TCTATCGCGGCGCTGCCAAGATGGATCGGCTATCCGAACTGCAAGGGAAGAAAGTCTCCATTGGCGTTCCGGGCAGCGGG CTGCTCGAGGTCTCCCGAATCCTGCTCGCGCATAGCGGCATTACCGCTTCCAATACCACGCTGCTGCAAATGGACGCCAA CGCGGCCTACCAGGGCCTCAAGGATGGGCAGTTGGACGCCGCGTTCTTCATCGGCAGGCCGGATGCGGAGATGCAGCAGA CGCTATTGAACAGCGACCTGAAACTGATGAGCTTCGCCCAGGCCGATGCGCTGGTACAGAAATTCCCGTCGCTCTCCAAG ATCGTATTCCCGCGTGCCTCGACCAGCATCGTCAACGATCTGCCGCAGGCCGACGTCACGCTGCTGGCCGCCAAGGCCCT GCTCGTATCCAAGGACACCATGCACCCTGCATTGGTGTATCTACTGCTGGAAGCCGCCAAGACCGTCCACGGCGGCGAAG ACTACTTCACGCCGCTTGGCACGTTTCCCAACCTGAACACCAATGAATTTCCCGTTTCGGAGGAAAGCACGCGCTTCTTC AAGTCGGGGCGTCCTTTCCTGCAGCGATACCTGCCCTTCTGGCTGGCCAGCTTTGTCGAAAGACGGCTGCTGATCCTGCT CCCCTTCATGGCCCTGCTATTGGGCCTGTTGCAGGCCCTGCCGCGTTTCGCGGAGTCGCGGATCAAAGGCCGGCTCGTGG TCTGGTATCGGGAGATCAAGGCGCTGGAAGATGAAATCTGGAAAAGCGAGCGGCCGACGCGGCACCAGATTGCGCAGTGG CGCGAGGAAATCGAGCAGATCGATGCGCACGCCAGTCAGATACGGATGCCGCAGCGCTATTTTCAGGATGTCTACGCCCT CAAGCAGGCTATCGCCGTGGTGCGGAACCGGATTCTGCACGTGGCCGGGACGGTGAAGGAATAG
Upstream 100 bases:
>100_bases GGTATCGTAGAAAATCCAAAAATTACAAAACTCGCCATGTCATCAGCGATACTCGGCGTTGCTGCAGCGGGAGTACTTTC TTTCTGTTATCGGGTGACCA
Downstream 100 bases:
>100_bases CCGGCAGACAAGGGCTGGCCACGTCACCCGCCGGTGGCTCGCCTGGCCCCGGGGGGCTTCCGTCCCCTTTCACGAGCGGA ACGCAGCATTCCACAGGCCC
Product: putative TRAP transporter solute receptor, TAXI family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSRRDPALRRSQNPPMSAGRRRLLIAGGILLLVALGWSLVAVIRPAIQHTIIITTGADKGIYQGFADRYATILKRDGIKL EIRSSSGSIENYERLKNPDSAYEVGFIQSGTVSPSDTDGLQTIAAVAYEPIWVFYRGAAKMDRLSELQGKKVSIGVPGSG LLEVSRILLAHSGITASNTTLLQMDANAAYQGLKDGQLDAAFFIGRPDAEMQQTLLNSDLKLMSFAQADALVQKFPSLSK IVFPRASTSIVNDLPQADVTLLAAKALLVSKDTMHPALVYLLLEAAKTVHGGEDYFTPLGTFPNLNTNEFPVSEESTRFF KSGRPFLQRYLPFWLASFVERRLLILLPFMALLLGLLQALPRFAESRIKGRLVVWYREIKALEDEIWKSERPTRHQIAQW REEIEQIDAHASQIRMPQRYFQDVYALKQAIAVVRNRILHVAGTVKE
Sequences:
>Translated_447_residues MSRRDPALRRSQNPPMSAGRRRLLIAGGILLLVALGWSLVAVIRPAIQHTIIITTGADKGIYQGFADRYATILKRDGIKL EIRSSSGSIENYERLKNPDSAYEVGFIQSGTVSPSDTDGLQTIAAVAYEPIWVFYRGAAKMDRLSELQGKKVSIGVPGSG LLEVSRILLAHSGITASNTTLLQMDANAAYQGLKDGQLDAAFFIGRPDAEMQQTLLNSDLKLMSFAQADALVQKFPSLSK IVFPRASTSIVNDLPQADVTLLAAKALLVSKDTMHPALVYLLLEAAKTVHGGEDYFTPLGTFPNLNTNEFPVSEESTRFF KSGRPFLQRYLPFWLASFVERRLLILLPFMALLLGLLQALPRFAESRIKGRLVVWYREIKALEDEIWKSERPTRHQIAQW REEIEQIDAHASQIRMPQRYFQDVYALKQAIAVVRNRILHVAGTVKE >Mature_446_residues SRRDPALRRSQNPPMSAGRRRLLIAGGILLLVALGWSLVAVIRPAIQHTIIITTGADKGIYQGFADRYATILKRDGIKLE IRSSSGSIENYERLKNPDSAYEVGFIQSGTVSPSDTDGLQTIAAVAYEPIWVFYRGAAKMDRLSELQGKKVSIGVPGSGL LEVSRILLAHSGITASNTTLLQMDANAAYQGLKDGQLDAAFFIGRPDAEMQQTLLNSDLKLMSFAQADALVQKFPSLSKI VFPRASTSIVNDLPQADVTLLAAKALLVSKDTMHPALVYLLLEAAKTVHGGEDYFTPLGTFPNLNTNEFPVSEESTRFFK SGRPFLQRYLPFWLASFVERRLLILLPFMALLLGLLQALPRFAESRIKGRLVVWYREIKALEDEIWKSERPTRHQIAQWR EEIEQIDAHASQIRMPQRYFQDVYALKQAIAVVRNRILHVAGTVKE
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 49836; Mature: 49705
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRDPALRRSQNPPMSAGRRRLLIAGGILLLVALGWSLVAVIRPAIQHTIIITTGADKG CCCCCCCHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCH IYQGFADRYATILKRDGIKLEIRSSSGSIENYERLKNPDSAYEVGFIQSGTVSPSDTDGL HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHH QTIAAVAYEPIWVFYRGAAKMDRLSELQGKKVSIGVPGSGLLEVSRILLAHSGITASNTT HHHHHHHHCCHHEEECCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCE LLQMDANAAYQGLKDGQLDAAFFIGRPDAEMQQTLLNSDLKLMSFAQADALVQKFPSLSK EEEECCHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH IVFPRASTSIVNDLPQADVTLLAAKALLVSKDTMHPALVYLLLEAAKTVHGGEDYFTPLG EECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCC TFPNLNTNEFPVSEESTRFFKSGRPFLQRYLPFWLASFVERRLLILLPFMALLLGLLQAL CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PRFAESRIKGRLVVWYREIKALEDEIWKSERPTRHQIAQWREEIEQIDAHASQIRMPQRY HHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH FQDVYALKQAIAVVRNRILHVAGTVKE HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRRDPALRRSQNPPMSAGRRRLLIAGGILLLVALGWSLVAVIRPAIQHTIIITTGADKG CCCCCCHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCH IYQGFADRYATILKRDGIKLEIRSSSGSIENYERLKNPDSAYEVGFIQSGTVSPSDTDGL HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHH QTIAAVAYEPIWVFYRGAAKMDRLSELQGKKVSIGVPGSGLLEVSRILLAHSGITASNTT HHHHHHHHCCHHEEECCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCE LLQMDANAAYQGLKDGQLDAAFFIGRPDAEMQQTLLNSDLKLMSFAQADALVQKFPSLSK EEEECCHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH IVFPRASTSIVNDLPQADVTLLAAKALLVSKDTMHPALVYLLLEAAKTVHGGEDYFTPLG EECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCC TFPNLNTNEFPVSEESTRFFKSGRPFLQRYLPFWLASFVERRLLILLPFMALLLGLLQAL CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PRFAESRIKGRLVVWYREIKALEDEIWKSERPTRHQIAQWREEIEQIDAHASQIRMPQRY HHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH FQDVYALKQAIAVVRNRILHVAGTVKE HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]