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The map label for this gene is ynfA [C]

Identifier: 94312960

GI number: 94312960

Start: 601086

End: 601403

Strand: Reverse

Name: ynfA [C]

Synonym: Rmet_4032

Alternate gene names: 94312960

Gene position: 601403-601086 (Counterclockwise)

Preceding gene: 94312961

Following gene: 94312957

Centisome position: 23.31

GC content: 66.67

Gene sequence:

>318_bases
ATGAAAACCGTCGGACTCTATCTGCTTACCGCGCTGGCCGAGATTCTCGGCTGCTATCTGCCCTACCTCTGGCTGCGCCA
GGGTGCTAGCCCGTGGGTACTCCTGCCCGGCGCGGCATCGCTGGCCGTGTTCGCGTGGCTGCTGACACTGCATCCGGACG
CCTCCGGCCGTGTGTATGCAGCCTACGGCGGCGTCTATATCGCGATGGCCATCGCATGGCTCTGGGCGGTGGATGGCGTG
CGCCCGAGTCCGTGGGATATCGCGGGCGTGGCGGTGGCGCTGGGTGGCATGGCCATCATCGTGTTCCAGCCGCGCTGA

Upstream 100 bases:

>100_bases
CGCGAGTCGCAGGAAAACGAACTTGTGACGGGGCTGGCAGCGGCACTGCGCCAGGCCATCTGAATCGACAGCAGGAAAAA
GGAAAAGGCTGAAAACCGGG

Downstream 100 bases:

>100_bases
CGCGCTGCCCTTCTCTTCCTGCTTTCCCTGCGCTCCCGCCATTGCCGCCGCCATTGCCGCCGCCTTTTCCCGCCGCCTTT
GCCGCTATTGGAAGGTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKTVGLYLLTALAEILGCYLPYLWLRQGASPWVLLPGAASLAVFAWLLTLHPDASGRVYAAYGGVYIAMAIAWLWAVDGV
RPSPWDIAGVAVALGGMAIIVFQPR

Sequences:

>Translated_105_residues
MKTVGLYLLTALAEILGCYLPYLWLRQGASPWVLLPGAASLAVFAWLLTLHPDASGRVYAAYGGVYIAMAIAWLWAVDGV
RPSPWDIAGVAVALGGMAIIVFQPR
>Mature_105_residues
MKTVGLYLLTALAEILGCYLPYLWLRQGASPWVLLPGAASLAVFAWLLTLHPDASGRVYAAYGGVYIAMAIAWLWAVDGV
RPSPWDIAGVAVALGGMAIIVFQPR

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=101, Percent_Identity=60.3960396039604, Blast_Score=120, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4032_RALME (Q1LG26)

Other databases:

- EMBL:   CP000353
- RefSeq:   YP_586169.1
- STRING:   Q1LG26
- GeneID:   4040890
- GenomeReviews:   CP000353_GR
- KEGG:   rme:Rmet_4032
- eggNOG:   COG1742
- HOGENOM:   HBG313568
- OMA:   MAILWLW
- PhylomeDB:   Q1LG26
- ProtClustDB:   PRK02237
- BioCyc:   RMET266264:RMET_4032-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11245; Mature: 11245

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd8b7d50)-; HASH(0x1052a1e0)-; HASH(0xf5d2e0c)-; HASH(0xfc1ec38)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVGLYLLTALAEILGCYLPYLWLRQGASPWVLLPGAASLAVFAWLLTLHPDASGRVYA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEE
AYGGVYIAMAIAWLWAVDGVRPSPWDIAGVAVALGGMAIIVFQPR
EHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEEECH
>Mature Secondary Structure
MKTVGLYLLTALAEILGCYLPYLWLRQGASPWVLLPGAASLAVFAWLLTLHPDASGRVYA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEE
AYGGVYIAMAIAWLWAVDGVRPSPWDIAGVAVALGGMAIIVFQPR
EHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA