| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is fecR [H]
Identifier: 94312928
GI number: 94312928
Start: 571663
End: 572607
Strand: Reverse
Name: fecR [H]
Synonym: Rmet_4000
Alternate gene names: 94312928
Gene position: 572607-571663 (Counterclockwise)
Preceding gene: 94312929
Following gene: 94312927
Centisome position: 22.19
GC content: 69.31
Gene sequence:
>945_bases GTGGCACTCGCCGCAGTGGAATGGTTGGTAACGCTGCAAGGCGGTGAAACGGATGGGGCATCCCACGCCGCGTGGCGCCA TTGGCTCTCTCAGCATCCCGACCACGCGCGCGCCTGGGCGCGGATCGAGGCAGTGAATGCGCGGCTGCGCGACGTCGCGT CGCCACTGACCACGGCCGTCGCGCACGCGGCGCTGACTACGCCGCGCTCCGCGAGTCGCCGCCGGGCCGTCCAGGCGCTG GTGGTTGCCTTCACCGGCGGCGCGGCAGCATGGGCTGCGCGAGATCACGCGCCATTGCAGGACTGGCTGGCCGATGTAAG TACGGCCGTGGGTGAGCAACGTCTTCTGTCGCTCGCGGACGGCACGCAGATCAGACTCAATTCCGATACCGCCATCGATA TCGCCTTCACGGCCACCGAGCGGCGTGTTGTCCTGCGACGCGGCGAGATCCATGTCCAGACAGCCCCGGATCGACACTGG CCAGCGCGCCCATTCATCGTCGCAACCGCCTCGGCCACGCTACGCCCAATGGGCACCCGGTTCGCGGTGCGCGTATCGGG TGACGCCGGCTGGATCGCCGTCACCGAAGGCGCCGTCGCGGTTCAGCCACAGGCGGACCCTACTGGCGGACGCATCATCG CCGCGGGCAAGCAGGCACGGTTCACCCCGGCGAGCGTCGGTGCGCCCACGCCGCTGCCCGAGAGCGATACCGCCTGGACC GACGGCATGATCGTCGCCACGGACATGCGCCTGGCGGATTTCCTCGCCGAGGTCGACCGTTACCGACCCGGGCGGCTGCG CTGCGCCCCGGACGTGGCCGATCTGCGCGTGTCCGGCACCTTTCCAGTAGCCGATACCGATCGCATCCTCGATGCCCTTC GCACCGCCCTCCCCGTGCGCATCCATTTCCTGACGCGCTACTGGACAACGGTCCTTCCCGCCTGA
Upstream 100 bases:
>100_bases CGGTGACGACGGTCAAGCGCTATCTGGTTCGCGCCGGCACAAAGTGCTATTTCGCGATGTCCCTCGCATGAGCGCGCAAG ATCTGGGGATACCACCGCAC
Downstream 100 bases:
>100_bases CGTTTCGTTTTTTTCCGCCAAGGAGTGGTCTGTTCTGGATTCTCGCGTGACATAGGAGATGAGACCTACTTTCACGCCTC TCCCGCAGTCGAATCCATGC
Product: FecR-like transmembrane sensor, Fe2+-dicitrate sensor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MALAAVEWLVTLQGGETDGASHAAWRHWLSQHPDHARAWARIEAVNARLRDVASPLTTAVAHAALTTPRSASRRRAVQAL VVAFTGGAAAWAARDHAPLQDWLADVSTAVGEQRLLSLADGTQIRLNSDTAIDIAFTATERRVVLRRGEIHVQTAPDRHW PARPFIVATASATLRPMGTRFAVRVSGDAGWIAVTEGAVAVQPQADPTGGRIIAAGKQARFTPASVGAPTPLPESDTAWT DGMIVATDMRLADFLAEVDRYRPGRLRCAPDVADLRVSGTFPVADTDRILDALRTALPVRIHFLTRYWTTVLPA
Sequences:
>Translated_314_residues MALAAVEWLVTLQGGETDGASHAAWRHWLSQHPDHARAWARIEAVNARLRDVASPLTTAVAHAALTTPRSASRRRAVQAL VVAFTGGAAAWAARDHAPLQDWLADVSTAVGEQRLLSLADGTQIRLNSDTAIDIAFTATERRVVLRRGEIHVQTAPDRHW PARPFIVATASATLRPMGTRFAVRVSGDAGWIAVTEGAVAVQPQADPTGGRIIAAGKQARFTPASVGAPTPLPESDTAWT DGMIVATDMRLADFLAEVDRYRPGRLRCAPDVADLRVSGTFPVADTDRILDALRTALPVRIHFLTRYWTTVLPA >Mature_313_residues ALAAVEWLVTLQGGETDGASHAAWRHWLSQHPDHARAWARIEAVNARLRDVASPLTTAVAHAALTTPRSASRRRAVQALV VAFTGGAAAWAARDHAPLQDWLADVSTAVGEQRLLSLADGTQIRLNSDTAIDIAFTATERRVVLRRGEIHVQTAPDRHWP ARPFIVATASATLRPMGTRFAVRVSGDAGWIAVTEGAVAVQPQADPTGGRIIAAGKQARFTPASVGAPTPLPESDTAWTD GMIVATDMRLADFLAEVDRYRPGRLRCAPDVADLRVSGTFPVADTDRILDALRTALPVRIHFLTRYWTTVLPA
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=310, Percent_Identity=33.8709677419355, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 33825; Mature: 33693
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAAVEWLVTLQGGETDGASHAAWRHWLSQHPDHARAWARIEAVNARLRDVASPLTTAV CCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AHAALTTPRSASRRRAVQALVVAFTGGAAAWAARDHAPLQDWLADVSTAVGEQRLLSLAD HHHHHCCCCCHHHHHHHHEEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC GTQIRLNSDTAIDIAFTATERRVVLRRGEIHVQTAPDRHWPARPFIVATASATLRPMGTR CCEEEECCCCEEEEEEECCCCEEEEEECEEEEEECCCCCCCCCCEEEEECCCEECCCCCE FAVRVSGDAGWIAVTEGAVAVQPQADPTGGRIIAAGKQARFTPASVGAPTPLPESDTAWT EEEEECCCCCEEEEECCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC DGMIVATDMRLADFLAEVDRYRPGRLRCAPDVADLRVSGTFPVADTDRILDALRTALPVR CCEEEEECHHHHHHHHHHHHCCCCCEEECCCHHHEEECCCCCCCCHHHHHHHHHHHHHHH IHFLTRYWTTVLPA HHHHHHHHHHHCCC >Mature Secondary Structure ALAAVEWLVTLQGGETDGASHAAWRHWLSQHPDHARAWARIEAVNARLRDVASPLTTAV CCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AHAALTTPRSASRRRAVQALVVAFTGGAAAWAARDHAPLQDWLADVSTAVGEQRLLSLAD HHHHHCCCCCHHHHHHHHEEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC GTQIRLNSDTAIDIAFTATERRVVLRRGEIHVQTAPDRHWPARPFIVATASATLRPMGTR CCEEEECCCCEEEEEEECCCCEEEEEECEEEEEECCCCCCCCCCEEEEECCCEECCCCCE FAVRVSGDAGWIAVTEGAVAVQPQADPTGGRIIAAGKQARFTPASVGAPTPLPESDTAWT EEEEECCCCCEEEEECCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC DGMIVATDMRLADFLAEVDRYRPGRLRCAPDVADLRVSGTFPVADTDRILDALRTALPVR CCEEEEECHHHHHHHHHHHHCCCCCEEECCCHHHEEECCCCCCCCHHHHHHHHHHHHHHH IHFLTRYWTTVLPA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]