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The map label for this gene is 94312926

Identifier: 94312926

GI number: 94312926

Start: 568381

End: 569091

Strand: Reverse

Name: 94312926

Synonym: Rmet_3998

Alternate gene names: NA

Gene position: 569091-568381 (Counterclockwise)

Preceding gene: 94312927

Following gene: 94312925

Centisome position: 22.06

GC content: 63.85

Gene sequence:

>711_bases
ATGCCAGTTTCCCTGCTCCGCCGCGCGCTGACAATCGGCGTCATGCTCGCCACCTGCGGCATGACGTCCAACACCCTTGC
GACCACCGCTTCGCGCGGCACCATCGCGCTTGTCATGCAATCCAATGGGCCGAATGCCGACGTCGACCAGAATATCCGTA
TCCGCCTGGAAGGACGCGGATTCACCGTCAGGATGCTGAACCAGGACACCCCGGCATCGAACGCAGGTGACGTCCGCCTC
GTGATCCTGTCGTCAACGATCTCCGCCAAGCAGGTCAGCGCGGGCTGGCGCGAATTGGCGGTGCCGCTGCTGACCTGGGA
GAACGACTTGCTGGACGATCTGGCCATGACAGGCAAGCGTCTGGACACCGACTACGGCGAATCCCGGCGCGAGCGCTTCG
TGTGGCTGGTCAACGCCCCGCATCCGGTCGCGGCAGGGCTGCCGGCTGGCGCCACGAACGTGTATCGGAAACAGGCGGCG
ATGAATTGGGGCAAGCCCGGACTCGGTGCCAGCATCATCGCCACGCTCTACGGGCAACCCGAGAAGGCGGTGATCTTCAC
CTACGAGAAAGGGGCAACGATGGACTACGAGTCGCTCGCGCCCGCCCGTCGCGTGATGTTCTTCCTCGGCAACGATACGT
TCACGAACCTGTCCGGCGCGGGTATCAAGCTATTCGATGCTGCGATCGACTGGGCCACGGGAGACAGGTAG

Upstream 100 bases:

>100_bases
CCGCGTGTACTACCCGTCGGCGGTCAACCAGTATGCGGTCGCCGTTGGCAACCCACGTCAGGTCACGTTGCTGACCACTT
TCGAGTTCTAAGGATTCACG

Downstream 100 bases:

>100_bases
AGCGGCCTGGCAAGGCTGGCAGGCCGCTGCCGGCGCTACAATGCGCGCTCGACCATTCCCGGAGATCGCCATCATGTTGC
CGGACAGCGAATCCCTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Lipoprotein; Thaumatin Pathogenesis-Related Protein; YD Repeat-Containing Protein; Lipoprotein

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MPVSLLRRALTIGVMLATCGMTSNTLATTASRGTIALVMQSNGPNADVDQNIRIRLEGRGFTVRMLNQDTPASNAGDVRL
VILSSTISAKQVSAGWRELAVPLLTWENDLLDDLAMTGKRLDTDYGESRRERFVWLVNAPHPVAAGLPAGATNVYRKQAA
MNWGKPGLGASIIATLYGQPEKAVIFTYEKGATMDYESLAPARRVMFFLGNDTFTNLSGAGIKLFDAAIDWATGDR

Sequences:

>Translated_236_residues
MPVSLLRRALTIGVMLATCGMTSNTLATTASRGTIALVMQSNGPNADVDQNIRIRLEGRGFTVRMLNQDTPASNAGDVRL
VILSSTISAKQVSAGWRELAVPLLTWENDLLDDLAMTGKRLDTDYGESRRERFVWLVNAPHPVAAGLPAGATNVYRKQAA
MNWGKPGLGASIIATLYGQPEKAVIFTYEKGATMDYESLAPARRVMFFLGNDTFTNLSGAGIKLFDAAIDWATGDR
>Mature_235_residues
PVSLLRRALTIGVMLATCGMTSNTLATTASRGTIALVMQSNGPNADVDQNIRIRLEGRGFTVRMLNQDTPASNAGDVRLV
ILSSTISAKQVSAGWRELAVPLLTWENDLLDDLAMTGKRLDTDYGESRRERFVWLVNAPHPVAAGLPAGATNVYRKQAAM
NWGKPGLGASIIATLYGQPEKAVIFTYEKGATMDYESLAPARRVMFFLGNDTFTNLSGAGIKLFDAAIDWATGDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25497; Mature: 25365

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSLLRRALTIGVMLATCGMTSNTLATTASRGTIALVMQSNGPNADVDQNIRIRLEGRG
CCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCC
FTVRMLNQDTPASNAGDVRLVILSSTISAKQVSAGWRELAVPLLTWENDLLDDLAMTGKR
EEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHEEEEEECCHHHHHHHHHCCCC
LDTDYGESRRERFVWLVNAPHPVAAGLPAGATNVYRKQAAMNWGKPGLGASIIATLYGQP
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
EKAVIFTYEKGATMDYESLAPARRVMFFLGNDTFTNLSGAGIKLFDAAIDWATGDR
CCEEEEEECCCCCCCHHHHCCHHEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
PVSLLRRALTIGVMLATCGMTSNTLATTASRGTIALVMQSNGPNADVDQNIRIRLEGRG
CHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCC
FTVRMLNQDTPASNAGDVRLVILSSTISAKQVSAGWRELAVPLLTWENDLLDDLAMTGKR
EEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHEEEEEECCHHHHHHHHHCCCC
LDTDYGESRRERFVWLVNAPHPVAAGLPAGATNVYRKQAAMNWGKPGLGASIIATLYGQP
CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
EKAVIFTYEKGATMDYESLAPARRVMFFLGNDTFTNLSGAGIKLFDAAIDWATGDR
CCEEEEEECCCCCCCHHHHCCHHEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA