| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is yebQ [H]
Identifier: 94312912
GI number: 94312912
Start: 550415
End: 551836
Strand: Reverse
Name: yebQ [H]
Synonym: Rmet_3984
Alternate gene names: 94312912
Gene position: 551836-550415 (Counterclockwise)
Preceding gene: 94312913
Following gene: 94312908
Centisome position: 21.39
GC content: 65.75
Gene sequence:
>1422_bases ATGGCAAGCCCAAGCCGCTCTCCGCCCCGTTCCATGCAGCCCCATCAAGGACTCCCCTATCCCCAGCGCGTCTGGGCAAT CCTGACCGTCTTCTGCGGTCTCATCATGGCCGTGCTCGATGGCTCGATCGCCAATATCGCCTTGCCATCGATCTCCCGTG AGCTCAACGCCGAAGCCGCCAGCACGATCTGGGTCGTCAACGCCTACCAGTTGACCGTTACCATCTGTCTGTTGCCGTTG TCGTCACTGGGCGACATCCTCGGCTACAAGCGTGTGTACCGGACAGGGCTGGCAATCTTCCTCATCGGATCGCTGATCGC CGCATGCGCGGTGAACCTGCCAATGCTGGTGGCGGCCCGCGTCATCCAGGGCATCGGCGGCGCCGGAATCATGAGTGTCA ATACCGCGCTCGTGCGATTCATCTATCCGCCGACCAAGCTCGGACGCGGCATCGGACTCAACGCGCTGGTGGTTGGCGTG ACGATCGCCGTTGGCCCGTCACTCGGCGCGCTGATCCTTGGCATCAGCAGCTGGCAGTGGCTGTTCGCGGTGAATGTACC GGTGGCCATCGTCGCGCTATGGATCTCGCGCTGGGCGCTGCCTGATACACCGGCCCAGCCGCGCGCGTTCGACTATCCCA GCGCCGTGCTGTCCGCAGTGGTCTTCGGCATGTTTATCCTCGGCGTCGACAGCATGGGCCACGCAACACTGCGCGTCGTT GGCGCGATCGGGATTGCGTTGGCCATCGTCCTTGGTTGGCTGCTGGTACGTCGGCAACGCGGACGTCCGGCGCCGCTGGT ACCGGTCGATCTGTTCGCGAGCCGCGCCTTCACGCTGGCTGTCGGCACATCGTTCTGCTCGTTCATGACGCAGATGCTCG CGTTCGTGGCCTTGCCGTTCTATCTCGAGTATCAGCTTGGGCGCAGCCTGCAGGAAACAGGCTTGCTGATCACCCCGTGG CCGCTGATGGTCGCCTTAATGGCAGCGCTGTCCGGCAGGCTGTCGGATCGCTATCCGGCCAGCATCCTGGCGGGTGCGGG CCTGATCATGCTGACTACCGGGCTGATCGGCCTGGCCTGGCTCTCGCCAACCGCCAGCAGCTTCGATATCGCCTGGCGCA CCGCGCTGTGCGGCATCGGCTTCGGCTTCTTCCAGTCCCCGAACAACCGGGCGATGATCGGCGCCACGCCACGTGAGCGA AGCGGCGGTGCCAGCGGTGCTCAGGCAACGACGCGTCTGCTGGGGCAGACCACGGGAACCGCGGTGGTTGCGCTGCTGTT CAGCCTCGACAACGCTGGTGCGGCGAGAACCGCGCTCTTCGCCGCCGCCGGCGTGGCAGCGATCGGCGCGATCATCAGCT TCAGCCGGCTGCGCGACGCCCAGCCCGCACCCGCCGAAGGCGCGGCCGAGCCGGACGCCTGA
Upstream 100 bases:
>100_bases CAGATTTGCGCTGCATGGCCTGACAGGACGATAATGGCGGGGCCGTTCTCTTCCAAATCCAGGGCGCCAAAAGCGGTCTG ACGGGGTCTCCGGGCCCGGA
Downstream 100 bases:
>100_bases TTACCCAAGGGCCGGGACTCGCGAGGGCCCCGGCCCGTGTTGGGATCATGCGGTATTAGTCCGCCTTCGCGCCAGAGTCC TTCACAACCTTCGCCCACTT
Product: putative transporter; MFS superfamily
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MASPSRSPPRSMQPHQGLPYPQRVWAILTVFCGLIMAVLDGSIANIALPSISRELNAEAASTIWVVNAYQLTVTICLLPL SSLGDILGYKRVYRTGLAIFLIGSLIAACAVNLPMLVAARVIQGIGGAGIMSVNTALVRFIYPPTKLGRGIGLNALVVGV TIAVGPSLGALILGISSWQWLFAVNVPVAIVALWISRWALPDTPAQPRAFDYPSAVLSAVVFGMFILGVDSMGHATLRVV GAIGIALAIVLGWLLVRRQRGRPAPLVPVDLFASRAFTLAVGTSFCSFMTQMLAFVALPFYLEYQLGRSLQETGLLITPW PLMVALMAALSGRLSDRYPASILAGAGLIMLTTGLIGLAWLSPTASSFDIAWRTALCGIGFGFFQSPNNRAMIGATPRER SGGASGAQATTRLLGQTTGTAVVALLFSLDNAGAARTALFAAAGVAAIGAIISFSRLRDAQPAPAEGAAEPDA
Sequences:
>Translated_473_residues MASPSRSPPRSMQPHQGLPYPQRVWAILTVFCGLIMAVLDGSIANIALPSISRELNAEAASTIWVVNAYQLTVTICLLPL SSLGDILGYKRVYRTGLAIFLIGSLIAACAVNLPMLVAARVIQGIGGAGIMSVNTALVRFIYPPTKLGRGIGLNALVVGV TIAVGPSLGALILGISSWQWLFAVNVPVAIVALWISRWALPDTPAQPRAFDYPSAVLSAVVFGMFILGVDSMGHATLRVV GAIGIALAIVLGWLLVRRQRGRPAPLVPVDLFASRAFTLAVGTSFCSFMTQMLAFVALPFYLEYQLGRSLQETGLLITPW PLMVALMAALSGRLSDRYPASILAGAGLIMLTTGLIGLAWLSPTASSFDIAWRTALCGIGFGFFQSPNNRAMIGATPRER SGGASGAQATTRLLGQTTGTAVVALLFSLDNAGAARTALFAAAGVAAIGAIISFSRLRDAQPAPAEGAAEPDA >Mature_472_residues ASPSRSPPRSMQPHQGLPYPQRVWAILTVFCGLIMAVLDGSIANIALPSISRELNAEAASTIWVVNAYQLTVTICLLPLS SLGDILGYKRVYRTGLAIFLIGSLIAACAVNLPMLVAARVIQGIGGAGIMSVNTALVRFIYPPTKLGRGIGLNALVVGVT IAVGPSLGALILGISSWQWLFAVNVPVAIVALWISRWALPDTPAQPRAFDYPSAVLSAVVFGMFILGVDSMGHATLRVVG AIGIALAIVLGWLLVRRQRGRPAPLVPVDLFASRAFTLAVGTSFCSFMTQMLAFVALPFYLEYQLGRSLQETGLLITPWP LMVALMAALSGRLSDRYPASILAGAGLIMLTTGLIGLAWLSPTASSFDIAWRTALCGIGFGFFQSPNNRAMIGATPRERS GGASGAQATTRLLGQTTGTAVVALLFSLDNAGAARTALFAAAGVAAIGAIISFSRLRDAQPAPAEGAAEPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=450, Percent_Identity=48.8888888888889, Blast_Score=403, Evalue=1e-113, Organism=Escherichia coli, GI1790195, Length=255, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1788392, Length=306, Percent_Identity=31.0457516339869, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1788710, Length=404, Percent_Identity=24.7524752475248, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1789042, Length=429, Percent_Identity=24.7086247086247, Blast_Score=100, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6325455, Length=151, Percent_Identity=34.4370860927152, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321663, Length=127, Percent_Identity=33.8582677165354, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49457; Mature: 49326
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPSRSPPRSMQPHQGLPYPQRVWAILTVFCGLIMAVLDGSIANIALPSISRELNAEAA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCHH STIWVVNAYQLTVTICLLPLSSLGDILGYKRVYRTGLAIFLIGSLIAACAVNLPMLVAAR CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VIQGIGGAGIMSVNTALVRFIYPPTKLGRGIGLNALVVGVTIAVGPSLGALILGISSWQW HHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCE LFAVNVPVAIVALWISRWALPDTPAQPRAFDYPSAVLSAVVFGMFILGVDSMGHATLRVV EEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH GAIGIALAIVLGWLLVRRQRGRPAPLVPVDLFASRAFTLAVGTSFCSFMTQMLAFVALPF HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH YLEYQLGRSLQETGLLITPWPLMVALMAALSGRLSDRYPASILAGAGLIMLTTGLIGLAW HHHHHHCCCHHHCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHH LSPTASSFDIAWRTALCGIGFGFFQSPNNRAMIGATPRERSGGASGAQATTRLLGQTTGT CCCCCCCCHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCHHH AVVALLFSLDNAGAARTALFAAAGVAAIGAIISFSRLRDAQPAPAEGAAEPDA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure ASPSRSPPRSMQPHQGLPYPQRVWAILTVFCGLIMAVLDGSIANIALPSISRELNAEAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCHH STIWVVNAYQLTVTICLLPLSSLGDILGYKRVYRTGLAIFLIGSLIAACAVNLPMLVAAR CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VIQGIGGAGIMSVNTALVRFIYPPTKLGRGIGLNALVVGVTIAVGPSLGALILGISSWQW HHHCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCE LFAVNVPVAIVALWISRWALPDTPAQPRAFDYPSAVLSAVVFGMFILGVDSMGHATLRVV EEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH GAIGIALAIVLGWLLVRRQRGRPAPLVPVDLFASRAFTLAVGTSFCSFMTQMLAFVALPF HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH YLEYQLGRSLQETGLLITPWPLMVALMAALSGRLSDRYPASILAGAGLIMLTTGLIGLAW HHHHHHCCCHHHCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHH LSPTASSFDIAWRTALCGIGFGFFQSPNNRAMIGATPRERSGGASGAQATTRLLGQTTGT CCCCCCCCHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCHHH AVVALLFSLDNAGAARTALFAAAGVAAIGAIISFSRLRDAQPAPAEGAAEPDA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]