| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94312900
Identifier: 94312900
GI number: 94312900
Start: 536055
End: 536528
Strand: Reverse
Name: 94312900
Synonym: Rmet_3972
Alternate gene names: NA
Gene position: 536528-536055 (Counterclockwise)
Preceding gene: 94312901
Following gene: 94312899
Centisome position: 20.79
GC content: 69.41
Gene sequence:
>474_bases ATGGCCCTTTTCCTGCTCTTCCGCATCGGCGCCGATCGCTACGCGCTCGATAGCGCCGAGGTGGCCGAGGTCCTGCCGCT CGGCCCCGTGAAACAGATTCCCGGCGCGCCGGAGTGGGTCTGCGGACTGATGACCCGGCACGGACAGCCCGTGCCCGTCA TCGACATCACCGCGCTGGCCACTGGCACACCCGCCACTGCGCGCGCCAGCACCCGCACCGCGCTGGTGCATTATCGGCGC GCGCGCGACTCCGGCACCCAGCCTCGCGTGCTCGGCCTGCGGCTCGAGCACGCCAACGAAACGTTGCGCTGCGATCCCGC ATCGTTCATCGATGGCGGCATCGACCCGACACACGCCCGCTACCTTGGACCGGTGCGCCACGATCCGCGTGGCCTGATCC AGTGGGTACATGTCGGTGCGCTGCTGCCCGACGCCGTCCACGCCATACTGTTTCCCGCATCGTCCCCGGCATGA
Upstream 100 bases:
>100_bases CAGCCAGGCCATCGACGAACTGACGCTGGTTTCCAACGAACTGCGCAGCGGCGTCTCGCGCTTCAAAGTCTGAACAGGCG ATCCCGGAGCCACCATCGCC
Downstream 100 bases:
>100_bases CCGACGCCCCCCACCCGTCCACCTTGATCGAGGCGCTGCTGAAGGAGCGCATCGGGCTCGATGCGGCATCGGTCGGCCGA GGCACGATCGAGCGCGCGGT
Product: putative chemotaxis signal transduction protein (cheW)
Products: NA
Alternate protein names: Chemotaxis Signal Transduction Protein; Chemotaxis-Related Protein; CheW Domain Protein; CheW Domain-Containing Protein WspB; Chemotaxis Signal Transduction Protein CheW; CheW-Like Domain-Containing; Chemotaxis Signal Transducer CheW-Like Protein; CheW Domain-Containing Protein; Chemotaxis Signal Transducer Chew-Like Protein; Chemotaxis-Like Protein; Chemotaxis Protein
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MALFLLFRIGADRYALDSAEVAEVLPLGPVKQIPGAPEWVCGLMTRHGQPVPVIDITALATGTPATARASTRTALVHYRR ARDSGTQPRVLGLRLEHANETLRCDPASFIDGGIDPTHARYLGPVRHDPRGLIQWVHVGALLPDAVHAILFPASSPA
Sequences:
>Translated_157_residues MALFLLFRIGADRYALDSAEVAEVLPLGPVKQIPGAPEWVCGLMTRHGQPVPVIDITALATGTPATARASTRTALVHYRR ARDSGTQPRVLGLRLEHANETLRCDPASFIDGGIDPTHARYLGPVRHDPRGLIQWVHVGALLPDAVHAILFPASSPA >Mature_156_residues ALFLLFRIGADRYALDSAEVAEVLPLGPVKQIPGAPEWVCGLMTRHGQPVPVIDITALATGTPATARASTRTALVHYRRA RDSGTQPRVLGLRLEHANETLRCDPASFIDGGIDPTHARYLGPVRHDPRGLIQWVHVGALLPDAVHAILFPASSPA
Specific function: Unknown
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16877; Mature: 16745
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFLLFRIGADRYALDSAEVAEVLPLGPVKQIPGAPEWVCGLMTRHGQPVPVIDITALA CEEEEEEEECCCCEECCCHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEC TGTPATARASTRTALVHYRRARDSGTQPRVLGLRLEHANETLRCDPASFIDGGIDPTHAR CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCHHHHCCCCCCCHHH YLGPVRHDPRGLIQWVHVGALLPDAVHAILFPASSPA HCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure ALFLLFRIGADRYALDSAEVAEVLPLGPVKQIPGAPEWVCGLMTRHGQPVPVIDITALA EEEEEEEECCCCEECCCHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEC TGTPATARASTRTALVHYRRARDSGTQPRVLGLRLEHANETLRCDPASFIDGGIDPTHAR CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCHHHHCCCCCCCHHH YLGPVRHDPRGLIQWVHVGALLPDAVHAILFPASSPA HCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA