Click here to switch to the map view.

The map label for this gene is 94312581

Identifier: 94312581

GI number: 94312581

Start: 182341

End: 183924

Strand: Reverse

Name: 94312581

Synonym: Rmet_3649

Alternate gene names: NA

Gene position: 183924-182341 (Counterclockwise)

Preceding gene: 94312604

Following gene: 94312580

Centisome position: 7.13

GC content: 71.4

Gene sequence:

>1584_bases
ATGCGCCAACAACAAGACTTCAAGAAGCGGATCGTCATCACGGCAGTACTGGGGGCACTGTTCGCGCTGGGCGGCTGCGC
CAGCGGCAGCGGTTCCACTTCGATGGGGACCAGCGGCTCGGGCGGATCGGGTGGCACCGCGGGCACGTCGGCGGGCACTG
GTAGCAGCGGCACCAATGGCGGGGCGGGTGGGTCTGGCAGCACTGGTGGTTCCGGCACGGACCTGGGCAGCAACGGCACA
GGTGGAAACGGCAGCAACAACGGTGGCAACAACAACAACAACAACAACGGCGGTGGCACCACCGCCGCGCTGACGCCGAC
CAGCGCGATCGTCAGCAACGCGGGCTCGGTCGCAGACGGCGCCGGCAAGACGGTCAGTGGTCTCGGCGACGCCATCAGCA
ACGCGAACGTGCCGGGCCTGCCATCGCAGACGCAGGCCGGTCTGGGTGGCGTGGTGACATCGGTTGGCAATGCCGTCAGC
ACGCTGGCCAACGGCGTGCAGTCCGGCCTCGGCAACATCCCCAACGCCACCAACCCCGTGGGCACGACCGTGGCCAGCAC
CGGTGGCGTGGTGAGCCAACTCGGCAATGCGGTAACGAATGCGGGCAGCGCGGTCAGCGGCCTTGGCACCGGACCGCTCG
CGCCGCTGGCTGCGCTGACCACGCCGCTCGGCGGCGTGGTGTCGCAAGTGGGCGGCACCGTCAGCAACGTTGGCACCCAG
CTCGGCACGGCGCTGTCGATCGGTCCCGTCGAGCAACTGACCGGCGGCGTCAGCAAGATCATCGTGCCGCTCACGTCGAC
GCTGACCAACGGCACGCAGACGCTGGGCGCGGCGACGGGTCTGGGCCAGCCGGTCAACAACTTGCTGGCGACGGTGGGCG
GCGCGCTGGCTGTAGCGGGCACCACGCTGACCAACACCAATACGCCTGTGGTCTCGGGCGTGGGTGGCGTGGTTACCGGC
GTGGGCAATACGGTGGCTTCGGTTGGCGGCGTCGTGAACGGACCTGCGGGCGGCAGCGTCACCAATCCACTGGCGCCCGT
TACCGGGCTCGTCAGCGGCCTCACCGGTGGTCTGAGCGGCGCGACCGGGGGCAGCGCCAGCCCGCTGGCCCCTGTGACGG
GTCTCGTCAGCGGTCTGACGGGCGGACTGACCAGCGCAGCCGGCGGCGGCACCAGCCCGCTCGCGCCCGTTACCGGTCTC
GTCAGCGGCGTGACCGGCGGACTGACCAGCGCAGCCGGCGGCGGCACCAGCCCGCTCGCGCCCGTTACTGGTCTCGTCAG
CGGCGTGACTGGCGGCCTGACCAGTGCAGCCGGTGGCGGCGGCAGCCCGCTGGCGCCGGTGACGGGCCTGGTCAGCGGCG
TCACCGGTGGACTGACCGGCGGCAATAGCGCCGGCACCACGGCCAGCCCGCTGGCCCCGGTCACCGGCATCGTTGCCGGC
CTCACTGGTGGCAACGCGCCCGCCAGCACCAGTGGCACGACGACGGGCGGCACCAAGGCCGCCAATCCGCTGGCACCCGT
CACGGGCCTCGTCGGCGGACTGGTCAGTGGCCTGACCGGCGCGCTGGGTGGCACCAGGCACTGA

Upstream 100 bases:

>100_bases
ACATCGGCAGCCACGGCACGCCACACATCTCGACGCTCGACCGACGAGCGTGCACGTGAACTTCGACGGGTAAGAGAAAA
GACAAAAAGGGGAACAGGTC

Downstream 100 bases:

>100_bases
CCTCCGCAGCAACCGAATCAAGCGAATCAACCAAATCAACTGAAGCAAAAAGCGTCGCGGCCACCGATGGGCGGCAGGGA
GAGCGGCATCCCTACCGTCC

Product: hemagglutinin-related transmembrane protein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MRQQQDFKKRIVITAVLGALFALGGCASGSGSTSMGTSGSGGSGGTAGTSAGTGSSGTNGGAGGSGSTGGSGTDLGSNGT
GGNGSNNGGNNNNNNNGGGTTAALTPTSAIVSNAGSVADGAGKTVSGLGDAISNANVPGLPSQTQAGLGGVVTSVGNAVS
TLANGVQSGLGNIPNATNPVGTTVASTGGVVSQLGNAVTNAGSAVSGLGTGPLAPLAALTTPLGGVVSQVGGTVSNVGTQ
LGTALSIGPVEQLTGGVSKIIVPLTSTLTNGTQTLGAATGLGQPVNNLLATVGGALAVAGTTLTNTNTPVVSGVGGVVTG
VGNTVASVGGVVNGPAGGSVTNPLAPVTGLVSGLTGGLSGATGGSASPLAPVTGLVSGLTGGLTSAAGGGTSPLAPVTGL
VSGVTGGLTSAAGGGTSPLAPVTGLVSGVTGGLTSAAGGGGSPLAPVTGLVSGVTGGLTGGNSAGTTASPLAPVTGIVAG
LTGGNAPASTSGTTTGGTKAANPLAPVTGLVGGLVSGLTGALGGTRH

Sequences:

>Translated_527_residues
MRQQQDFKKRIVITAVLGALFALGGCASGSGSTSMGTSGSGGSGGTAGTSAGTGSSGTNGGAGGSGSTGGSGTDLGSNGT
GGNGSNNGGNNNNNNNGGGTTAALTPTSAIVSNAGSVADGAGKTVSGLGDAISNANVPGLPSQTQAGLGGVVTSVGNAVS
TLANGVQSGLGNIPNATNPVGTTVASTGGVVSQLGNAVTNAGSAVSGLGTGPLAPLAALTTPLGGVVSQVGGTVSNVGTQ
LGTALSIGPVEQLTGGVSKIIVPLTSTLTNGTQTLGAATGLGQPVNNLLATVGGALAVAGTTLTNTNTPVVSGVGGVVTG
VGNTVASVGGVVNGPAGGSVTNPLAPVTGLVSGLTGGLSGATGGSASPLAPVTGLVSGLTGGLTSAAGGGTSPLAPVTGL
VSGVTGGLTSAAGGGTSPLAPVTGLVSGVTGGLTSAAGGGGSPLAPVTGLVSGVTGGLTGGNSAGTTASPLAPVTGIVAG
LTGGNAPASTSGTTTGGTKAANPLAPVTGLVGGLVSGLTGALGGTRH
>Mature_527_residues
MRQQQDFKKRIVITAVLGALFALGGCASGSGSTSMGTSGSGGSGGTAGTSAGTGSSGTNGGAGGSGSTGGSGTDLGSNGT
GGNGSNNGGNNNNNNNGGGTTAALTPTSAIVSNAGSVADGAGKTVSGLGDAISNANVPGLPSQTQAGLGGVVTSVGNAVS
TLANGVQSGLGNIPNATNPVGTTVASTGGVVSQLGNAVTNAGSAVSGLGTGPLAPLAALTTPLGGVVSQVGGTVSNVGTQ
LGTALSIGPVEQLTGGVSKIIVPLTSTLTNGTQTLGAATGLGQPVNNLLATVGGALAVAGTTLTNTNTPVVSGVGGVVTG
VGNTVASVGGVVNGPAGGSVTNPLAPVTGLVSGLTGGLSGATGGSASPLAPVTGLVSGLTGGLTSAAGGGTSPLAPVTGL
VSGVTGGLTSAAGGGTSPLAPVTGLVSGVTGGLTSAAGGGGSPLAPVTGLVSGVTGGLTGGNSAGTTASPLAPVTGIVAG
LTGGNAPASTSGTTTGGTKAANPLAPVTGLVGGLVSGLTGALGGTRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46901; Mature: 46901

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQQQDFKKRIVITAVLGALFALGGCASGSGSTSMGTSGSGGSGGTAGTSAGTGSSGTNG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GAGGSGSTGGSGTDLGSNGTGGNGSNNGGNNNNNNNGGGTTAALTPTSAIVSNAGSVADG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCC
AGKTVSGLGDAISNANVPGLPSQTQAGLGGVVTSVGNAVSTLANGVQSGLGNIPNATNPV
CCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GTTVASTGGVVSQLGNAVTNAGSAVSGLGTGPLAPLAALTTPLGGVVSQVGGTVSNVGTQ
CCHHHHCCHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHH
LGTALSIGPVEQLTGGVSKIIVPLTSTLTNGTQTLGAATGLGQPVNNLLATVGGALAVAG
HHCCCCCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHCC
TTLTNTNTPVVSGVGGVVTGVGNTVASVGGVVNGPAGGSVTNPLAPVTGLVSGLTGGLSG
CEECCCCCCHHHCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
ATGGSASPLAPVTGLVSGLTGGLTSAAGGGTSPLAPVTGLVSGVTGGLTSAAGGGTSPLA
CCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCHH
PVTGLVSGVTGGLTSAAGGGGSPLAPVTGLVSGVTGGLTGGNSAGTTASPLAPVTGIVAG
HHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
LTGGNAPASTSGTTTGGTKAANPLAPVTGLVGGLVSGLTGALGGTRH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRQQQDFKKRIVITAVLGALFALGGCASGSGSTSMGTSGSGGSGGTAGTSAGTGSSGTNG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GAGGSGSTGGSGTDLGSNGTGGNGSNNGGNNNNNNNGGGTTAALTPTSAIVSNAGSVADG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCC
AGKTVSGLGDAISNANVPGLPSQTQAGLGGVVTSVGNAVSTLANGVQSGLGNIPNATNPV
CCCHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GTTVASTGGVVSQLGNAVTNAGSAVSGLGTGPLAPLAALTTPLGGVVSQVGGTVSNVGTQ
CCHHHHCCHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHH
LGTALSIGPVEQLTGGVSKIIVPLTSTLTNGTQTLGAATGLGQPVNNLLATVGGALAVAG
HHCCCCCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHCC
TTLTNTNTPVVSGVGGVVTGVGNTVASVGGVVNGPAGGSVTNPLAPVTGLVSGLTGGLSG
CEECCCCCCHHHCCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
ATGGSASPLAPVTGLVSGLTGGLTSAAGGGTSPLAPVTGLVSGVTGGLTSAAGGGTSPLA
CCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCHH
PVTGLVSGVTGGLTSAAGGGGSPLAPVTGLVSGVTGGLTGGNSAGTTASPLAPVTGIVAG
HHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
LTGGNAPASTSGTTTGGTKAANPLAPVTGLVGGLVSGLTGALGGTRH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA