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The map label for this gene is 94312580

Identifier: 94312580

GI number: 94312580

Start: 180513

End: 182189

Strand: Reverse

Name: 94312580

Synonym: Rmet_3648

Alternate gene names: NA

Gene position: 182189-180513 (Counterclockwise)

Preceding gene: 94312581

Following gene: 94312578

Centisome position: 7.06

GC content: 64.94

Gene sequence:

>1677_bases
ATGCGTACACGCAAGCGTGTTGCCGCATTGCTGATTGGCATCGGCGCCATTCATAGCGGCCTGTCTCATGCCGAACGGAG
CCCGGTCCAGGGCGACCCGACCCAGACTCTCCCGACCATCGCGCCGAGCAAGCCAGCGCAGAGCAATGTCACCGTGCAGG
TGGAACGGCCCGATGCGGCCATGCAGAATCTGCTCGCCTCGCGCCTGACGCCGAAGCATTTCAAGATCGAAGGCGCGAAA
ACGCTGCCGTTCGAACAGATCGCCGCCAAGTTCTCACCGCTGGCTAACCGCGAGATCAGCGTGGCCGAACTGCTGCAGGC
CGCGGAATCTGTCACCCAGATGTACAAGGACGCGGGATACCCGCTGTCGTTCGCGTTTGTGCCCGCGCAGTCGTTCGAGA
ACGGCGACGTGCTGATCACCGTGGTGGAAGGCTACGTGGCCAACGTCACGGTCCGCGGCAAGCCTGGCCCAGCCGAGGGC
CGCCTGCGCAAGATCGCGCAGCAACTGATGCGCGACCGCCCGCTGCGGCAGGAGAGCTTCGAGCACTACGTCAACGTGCT
GTCACAACAGCCGGGCATGCAGATCAACGCCACAGTGCAGCCGCCCACCACCACCGATGGCGCGTGCGAGATGGTGCTCG
AGGCCAAGCGCAAGCCGTTCACGTTCGGCACCGGTGTGGAGTGGATGTCGCCGGGCCTGCGCGCCATCGCCACGGCCACC
ACCAACAGCCTCACGCCGCTCGGCGAGCAGCTCTCGTTCACGACGCTTTTCCCGAAGGGCCACAACGACGAGGAGTACTA
CGCGCTCAACTACGCCCAGCCGATCGGCACCGAGGGCATGCTGGCCAAGGTGACGGCGTCGCACTATCGCGGCGTGCCCG
AGAACACGTCACTGGCGCCCATCGGCTTCGAATCGCGCTATGTCAACGACTCCAAGCGTCTCGGCGGCACGCTGAGCTAC
CCCGTGATCCTCAACAACCGCCATGCGCTCACGCTGACCGGCGGCTTCTACGCGAATAACCAGTTCGAGCGCTACACGCA
GGCGGTGCAGCCGGGCGCGGGCCGGCAGATCGAGTTGTCGACCGATGTGCGCGTGGCCAGCGCGGAGGCGTCGTACCTGC
AGCGCGGCCAGGGTTTCACGCGCAACGCCACGCTGGGCTTCTACAAGGGCTTCGACGGGCTCGGGGCAAGCCGCCAGAAC
AACATCAACGACCTGAGCTTCTTCCGCACCCGGTTGCTCGTGTCGCAGGCCAACGACCTGCCCTACGGATTTGGCACATC
GATTTCCGCGGCAGGCCAGTACAGCGGCAACCGATTGGCATCGAGCGAGCAGATCAGCTTCGGCGGCCGCTTCTTCGGCC
TGGGCTATCCCGCCGGCGAAGTGGCTGGAGACAAGGGCTGGGGGGCTTCCGCCGAAATCAACCGGATGTTCGCGGTGGAC
TACACCTACCTGAAGACGCTGCAGCCATTCATCGTCACCGACTACGCGCGCGTGTTCTCCAACAGCGTGTCGCTGTCGCA
CCGGACGCTGCAATCGGTCGCCATCGGCCTGCGGTTCTCCGACCGTCGCTACTACACGATGGATATCTCGGTGGCGCAGC
CCGTGGGCGACAAGCCGACCAACGCGAGCCATCGTTCGCCGCGTTTCAACCTGCTCTGGTCGTACCAGTTCGACTGA

Upstream 100 bases:

>100_bases
GCGTCGCGGCCACCGATGGGCGGCAGGGAGAGCGGCATCCCTACCGTCCGCGGCACGCGGCGTCATAGCCGCAAAGCTGT
CTTGATCAAGGGGTATTACC

Downstream 100 bases:

>100_bases
CGGGTGGCCGGCGCGGCGGAACAGGGGTCTGCGCCATGCCGCCGGCCCCGTTCAGTTCACGCGGAACCCGATCTTGAGCG
TCACCTGAAAGTGCGCGACC

Product: putative activation/secretion signal peptide protein

Products: NA

Alternate protein names: Hemolysin Activation/Secretion Protein; Polypeptide-Transport-Associated Domain Protein ShlB-Type; Activation/Secretion Signal Peptide Protein; Hemolysin Activation/Secretion Protein-Like; OMP85 Family Outer Membrane Protein; Exported Protein; Surface Antigen D; Outer Membrane Protein; Surface Antigen Variable Number Repeat Family Protein; Heme-Hemopexin Utilization Protein B; POTRA Domain ShlB-Type Family; Hemolysin Activator Protein; Hemolysin Activator-Like Protein With Signal Peptide; ShlB-Type Family Protein; Hemolysin Activation/Secretion Signal Peptide Protein; Secreted Protein Related Heme Utilisation; Exported Heme Utilisation Related Protein; Heme/Hemopexin Utilization Protein; HlyB Family Hemolysin Activator Protein

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MRTRKRVAALLIGIGAIHSGLSHAERSPVQGDPTQTLPTIAPSKPAQSNVTVQVERPDAAMQNLLASRLTPKHFKIEGAK
TLPFEQIAAKFSPLANREISVAELLQAAESVTQMYKDAGYPLSFAFVPAQSFENGDVLITVVEGYVANVTVRGKPGPAEG
RLRKIAQQLMRDRPLRQESFEHYVNVLSQQPGMQINATVQPPTTTDGACEMVLEAKRKPFTFGTGVEWMSPGLRAIATAT
TNSLTPLGEQLSFTTLFPKGHNDEEYYALNYAQPIGTEGMLAKVTASHYRGVPENTSLAPIGFESRYVNDSKRLGGTLSY
PVILNNRHALTLTGGFYANNQFERYTQAVQPGAGRQIELSTDVRVASAEASYLQRGQGFTRNATLGFYKGFDGLGASRQN
NINDLSFFRTRLLVSQANDLPYGFGTSISAAGQYSGNRLASSEQISFGGRFFGLGYPAGEVAGDKGWGASAEINRMFAVD
YTYLKTLQPFIVTDYARVFSNSVSLSHRTLQSVAIGLRFSDRRYYTMDISVAQPVGDKPTNASHRSPRFNLLWSYQFD

Sequences:

>Translated_558_residues
MRTRKRVAALLIGIGAIHSGLSHAERSPVQGDPTQTLPTIAPSKPAQSNVTVQVERPDAAMQNLLASRLTPKHFKIEGAK
TLPFEQIAAKFSPLANREISVAELLQAAESVTQMYKDAGYPLSFAFVPAQSFENGDVLITVVEGYVANVTVRGKPGPAEG
RLRKIAQQLMRDRPLRQESFEHYVNVLSQQPGMQINATVQPPTTTDGACEMVLEAKRKPFTFGTGVEWMSPGLRAIATAT
TNSLTPLGEQLSFTTLFPKGHNDEEYYALNYAQPIGTEGMLAKVTASHYRGVPENTSLAPIGFESRYVNDSKRLGGTLSY
PVILNNRHALTLTGGFYANNQFERYTQAVQPGAGRQIELSTDVRVASAEASYLQRGQGFTRNATLGFYKGFDGLGASRQN
NINDLSFFRTRLLVSQANDLPYGFGTSISAAGQYSGNRLASSEQISFGGRFFGLGYPAGEVAGDKGWGASAEINRMFAVD
YTYLKTLQPFIVTDYARVFSNSVSLSHRTLQSVAIGLRFSDRRYYTMDISVAQPVGDKPTNASHRSPRFNLLWSYQFD
>Mature_558_residues
MRTRKRVAALLIGIGAIHSGLSHAERSPVQGDPTQTLPTIAPSKPAQSNVTVQVERPDAAMQNLLASRLTPKHFKIEGAK
TLPFEQIAAKFSPLANREISVAELLQAAESVTQMYKDAGYPLSFAFVPAQSFENGDVLITVVEGYVANVTVRGKPGPAEG
RLRKIAQQLMRDRPLRQESFEHYVNVLSQQPGMQINATVQPPTTTDGACEMVLEAKRKPFTFGTGVEWMSPGLRAIATAT
TNSLTPLGEQLSFTTLFPKGHNDEEYYALNYAQPIGTEGMLAKVTASHYRGVPENTSLAPIGFESRYVNDSKRLGGTLSY
PVILNNRHALTLTGGFYANNQFERYTQAVQPGAGRQIELSTDVRVASAEASYLQRGQGFTRNATLGFYKGFDGLGASRQN
NINDLSFFRTRLLVSQANDLPYGFGTSISAAGQYSGNRLASSEQISFGGRFFGLGYPAGEVAGDKGWGASAEINRMFAVD
YTYLKTLQPFIVTDYARVFSNSVSLSHRTLQSVAIGLRFSDRRYYTMDISVAQPVGDKPTNASHRSPRFNLLWSYQFD

Specific function: Unknown

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61096; Mature: 61096

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRKRVAALLIGIGAIHSGLSHAERSPVQGDPTQTLPTIAPSKPAQSNVTVQVERPDAA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHH
MQNLLASRLTPKHFKIEGAKTLPFEQIAAKFSPLANREISVAELLQAAESVTQMYKDAGY
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PLSFAFVPAQSFENGDVLITVVEGYVANVTVRGKPGPAEGRLRKIAQQLMRDRPLRQESF
CEEEEEEECCCCCCCCEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH
EHYVNVLSQQPGMQINATVQPPTTTDGACEMVLEAKRKPFTFGTGVEWMSPGLRAIATAT
HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCHHEEEECC
TNSLTPLGEQLSFTTLFPKGHNDEEYYALNYAQPIGTEGMLAKVTASHYRGVPENTSLAP
CCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCCC
IGFESRYVNDSKRLGGTLSYPVILNNRHALTLTGGFYANNQFERYTQAVQPGAGRQIELS
CCCCCCCCCCHHHCCCEEECCEEECCCEEEEEECCEEECCHHHHHHHHHCCCCCCEEEEC
TDVRVASAEASYLQRGQGFTRNATLGFYKGFDGLGASRQNNINDLSFFRTRLLVSQANDL
CCEEEECHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PYGFGTSISAAGQYSGNRLASSEQISFGGRFFGLGYPAGEVAGDKGWGASAEINRMFAVD
CCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCHHCCCCCCCCCCCCCCEEEEEH
YTYLKTLQPFIVTDYARVFSNSVSLSHRTLQSVAIGLRFSDRRYYTMDISVAQPVGDKPT
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCEEEEEEEEEECCCCCCCC
NASHRSPRFNLLWSYQFD
CCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MRTRKRVAALLIGIGAIHSGLSHAERSPVQGDPTQTLPTIAPSKPAQSNVTVQVERPDAA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHH
MQNLLASRLTPKHFKIEGAKTLPFEQIAAKFSPLANREISVAELLQAAESVTQMYKDAGY
HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PLSFAFVPAQSFENGDVLITVVEGYVANVTVRGKPGPAEGRLRKIAQQLMRDRPLRQESF
CEEEEEEECCCCCCCCEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH
EHYVNVLSQQPGMQINATVQPPTTTDGACEMVLEAKRKPFTFGTGVEWMSPGLRAIATAT
HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCHHEEEECC
TNSLTPLGEQLSFTTLFPKGHNDEEYYALNYAQPIGTEGMLAKVTASHYRGVPENTSLAP
CCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEHHHHCCCCCCCCCCC
IGFESRYVNDSKRLGGTLSYPVILNNRHALTLTGGFYANNQFERYTQAVQPGAGRQIELS
CCCCCCCCCCHHHCCCEEECCEEECCCEEEEEECCEEECCHHHHHHHHHCCCCCCEEEEC
TDVRVASAEASYLQRGQGFTRNATLGFYKGFDGLGASRQNNINDLSFFRTRLLVSQANDL
CCEEEECHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PYGFGTSISAAGQYSGNRLASSEQISFGGRFFGLGYPAGEVAGDKGWGASAEINRMFAVD
CCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCCCHHCCCCCCCCCCCCCCEEEEEH
YTYLKTLQPFIVTDYARVFSNSVSLSHRTLQSVAIGLRFSDRRYYTMDISVAQPVGDKPT
HHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCEEEEEEEEEECCCCCCCC
NASHRSPRFNLLWSYQFD
CCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA