Click here to switch to the map view.

The map label for this gene is 94312458

Identifier: 94312458

GI number: 94312458

Start: 3819450

End: 3820418

Strand: Reverse

Name: 94312458

Synonym: Rmet_3527

Alternate gene names: NA

Gene position: 3820418-3819450 (Counterclockwise)

Preceding gene: 94312459

Following gene: 94312457

Centisome position: 97.26

GC content: 68.01

Gene sequence:

>969_bases
ATGACCGCTCCCGCCGCTTCGTTCGTCCCCCTGGATGCCGCCGCCACGGCGGCACGCCTGCCTTATCCGGAACTGGCCCA
GGCCATCGCGGCCATGCTGGCCGAGTTGCGCGACGGGACCGCCATGGCGCCGCCGCGCATCGCGCTGCCGGTCGGTGACG
CCGAGCGCGGGCATGGCACGCTGCTGGTCATGCCGGCACGCAACCGCGACATCGTGATGACCAAGAACATCACGGTGCAT
CCCGACAATCCGCAGCGAGGGCTGCCCAATATCCTCGGCGAGGTGGTCGTCGCCAACGCACACACTGGCGAACGGATCGC
ATTGCTCGATGGCCCGACCGTCACGGGCCGCCGCACGGCTGCCGTGTCGCTGCTCGCGGCCCAGTCGTTCGCGCCGGTGC
CGGATGGCGAGCTTCTGATCGTCGGAGCAGGCGTGCAGGCGCAGACGCATCTGGAGGCGTTCGTGGCTGGCTTACCCGTT
CGCAAGGTCTGGCTGCATTCGCGCACGCGAGACAAGGCCGAGGCGCTGGCGGAGCACGCTGGGCGCCTAGGCGTCTCGGC
CACGGTGATCGACGATGTGGCGGAGGTGCTGCCGCGTGTGTCGATGGTGGTGACGGTGACATCGAGCCGCACGCCGGTCC
TGCCCGATCTCGACAGCGGCCTGTGGACCGACCGCCATTTCATTGCTGCAGTTGGCGCATTCCGACCGGAAATGTGCGAA
TTGCCCCCGCGGCTTTGCCATGCGGCGGCGGCCAGTGGACGTCTGCTGGCGGACACGCTTTTCGGAATCGAGGACGAAGC
GGGAGATCTGCTGCAGGCCGGCATCGACTGGCAGACCGTGCAGCCATTCGAGACGGCGATCCTGGAGGCTGACGCATTGC
GTGCGCGGACCGGGAGTCCCCTCGTGTTCAAGAGCGTGGGCTACGCGCTCTGGGATCTTGCAGCCTGCGCGCTGGCCAGC
AAAAAGTGA

Upstream 100 bases:

>100_bases
CGCTGATCGGAACCGAGTCATCGGCGCGGCGTACTTCCGGCGACTCTCGGCGACTCTCGGCGACAATGGCGGTCTCGTTT
GCCAAACCGCCTTGTTGCCG

Downstream 100 bases:

>100_bases
CACAAAGTGCCTCCGCACAATACCCGAACGGGTGTTTGAGGACGGGCTGATGACGCCGGAAGGGCCATTTTTTCGAAATG
GTCTTTCATGCTTGAAACAG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: Ornithine Cyclodeaminase/Mu-Crystallin; Ornithine Cyclodeaminase/Mu-Crystallin Family Protein; Alanine Dehydrogenase; L-Alanine Dehydrogenase; Ornithine Cyclodeaminase/Mu-Crystallin Family; Ornithine Cyclodeaminase Mu-Crystallin-Like Protein; Ornithine Cyclodeaminase Mu-Crystallin; Ornithine Cyclodeaminase Protein

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTAPAASFVPLDAAATAARLPYPELAQAIAAMLAELRDGTAMAPPRIALPVGDAERGHGTLLVMPARNRDIVMTKNITVH
PDNPQRGLPNILGEVVVANAHTGERIALLDGPTVTGRRTAAVSLLAAQSFAPVPDGELLIVGAGVQAQTHLEAFVAGLPV
RKVWLHSRTRDKAEALAEHAGRLGVSATVIDDVAEVLPRVSMVVTVTSSRTPVLPDLDSGLWTDRHFIAAVGAFRPEMCE
LPPRLCHAAAASGRLLADTLFGIEDEAGDLLQAGIDWQTVQPFETAILEADALRARTGSPLVFKSVGYALWDLAACALAS
KK

Sequences:

>Translated_322_residues
MTAPAASFVPLDAAATAARLPYPELAQAIAAMLAELRDGTAMAPPRIALPVGDAERGHGTLLVMPARNRDIVMTKNITVH
PDNPQRGLPNILGEVVVANAHTGERIALLDGPTVTGRRTAAVSLLAAQSFAPVPDGELLIVGAGVQAQTHLEAFVAGLPV
RKVWLHSRTRDKAEALAEHAGRLGVSATVIDDVAEVLPRVSMVVTVTSSRTPVLPDLDSGLWTDRHFIAAVGAFRPEMCE
LPPRLCHAAAASGRLLADTLFGIEDEAGDLLQAGIDWQTVQPFETAILEADALRARTGSPLVFKSVGYALWDLAACALAS
KK
>Mature_321_residues
TAPAASFVPLDAAATAARLPYPELAQAIAAMLAELRDGTAMAPPRIALPVGDAERGHGTLLVMPARNRDIVMTKNITVHP
DNPQRGLPNILGEVVVANAHTGERIALLDGPTVTGRRTAAVSLLAAQSFAPVPDGELLIVGAGVQAQTHLEAFVAGLPVR
KVWLHSRTRDKAEALAEHAGRLGVSATVIDDVAEVLPRVSMVVTVTSSRTPVLPDLDSGLWTDRHFIAAVGAFRPEMCEL
PPRLCHAAAASGRLLADTLFGIEDEAGDLLQAGIDWQTVQPFETAILEADALRARTGSPLVFKSVGYALWDLAACALASK
K

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503065, Length=289, Percent_Identity=31.4878892733564, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI62241008, Length=293, Percent_Identity=31.0580204778157, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24642678, Length=244, Percent_Identity=30.327868852459, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33888; Mature: 33757

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPAASFVPLDAAATAARLPYPELAQAIAAMLAELRDGTAMAPPRIALPVGDAERGHGT
CCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCE
LLVMPARNRDIVMTKNITVHPDNPQRGLPNILGEVVVANAHTGERIALLDGPTVTGRRTA
EEEEECCCCCEEEECCEEECCCCCCCCCHHHHHHEEEEECCCCCEEEEECCCCCCCCHHH
AVSLLAAQSFAPVPDGELLIVGAGVQAQTHLEAFVAGLPVRKVWLHSRTRDKAEALAEHA
HHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH
GRLGVSATVIDDVAEVLPRVSMVVTVTSSRTPVLPDLDSGLWTDRHFIAAVGAFRPEMCE
HCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHC
LPPRLCHAAAASGRLLADTLFGIEDEAGDLLQAGIDWQTVQPFETAILEADALRARTGSP
CCHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC
LVFKSVGYALWDLAACALASKK
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAPAASFVPLDAAATAARLPYPELAQAIAAMLAELRDGTAMAPPRIALPVGDAERGHGT
CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCE
LLVMPARNRDIVMTKNITVHPDNPQRGLPNILGEVVVANAHTGERIALLDGPTVTGRRTA
EEEEECCCCCEEEECCEEECCCCCCCCCHHHHHHEEEEECCCCCEEEEECCCCCCCCHHH
AVSLLAAQSFAPVPDGELLIVGAGVQAQTHLEAFVAGLPVRKVWLHSRTRDKAEALAEHA
HHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH
GRLGVSATVIDDVAEVLPRVSMVVTVTSSRTPVLPDLDSGLWTDRHFIAAVGAFRPEMCE
HCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHC
LPPRLCHAAAASGRLLADTLFGIEDEAGDLLQAGIDWQTVQPFETAILEADALRARTGSP
CCHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC
LVFKSVGYALWDLAACALASKK
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA