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The map label for this gene is parB [H]

Identifier: 94312434

GI number: 94312434

Start: 3792395

End: 3793297

Strand: Reverse

Name: parB [H]

Synonym: Rmet_3503

Alternate gene names: 94312434

Gene position: 3793297-3792395 (Counterclockwise)

Preceding gene: 94312435

Following gene: 94312432

Centisome position: 96.57

GC content: 64.45

Gene sequence:

>903_bases
ATGGCGACGATGAGTACCGCAAAGAAGAAGGGACTGGGTCGGGGGCTGGAAGCACTGCTCGGCGGCCCTGCAGAGATCGT
TGAAACCTCGAAGCAGGAGGGCGCGCCGTCTGTGCTGCGCGTCGATCAGCTTCAGCCTGGCAAGTACCAGCCGCGCACGC
GCATGGACGAAGGCGCGCTCCAGGAACTGGCCGCGAGCATTCGCGCTCAGGGGCTGATGCAGCCGATTCTGGTGCGTCGC
GTGGCCGAGCCCGATCGCTACGAGATCATCGCCGGTGAGCGCCGTTACCGCGCTTCGAAGCTTGCGGGTCTCGACAAGGT
GCCGGTGCTCGTGAAGGACGTCGCCGACGAGGCTGCGGCCGCGATGGCGCTGATCGAGAACATCCAGCGTGAAGACCTGA
ACCCGCTGGAAGAGGCGCAAGGCATCATGCGCCTGATCCGCGAATTCCGTTTTACGCACGAGCAGGCTGCCGAATCCGTA
GGCCGCTCGCGCAGTGCGGTATCGAATCTGCTGCGTCTGCTCAATCTTGCCGCGCCCGTCCAGACCATGCTGATGGCCGG
CGATCTCGACATGGGGCACGCGCGCGCGTTGCTGGCAGTCGACGGCGCGAATCAGATCACGCTGGCCAACCAGATCGTCA
ACAAGCGGCTGTCCGTGCGCGAGACCGAGAAGCTGGTGGCATCGACGCTCAAGCCGTTCGATCTGAAGTCCCTCAAGCAG
AAATCGGGCAATGGCACGCGCGATGTGGCGCGGCTCGAAGAAGAGCTTTCCGATACGCTGGGCCTGTCTGTGCAGATCAA
GCTCGGCGCGCGTGGCAAGGGCCAGCTCACGATTCACTTCGCCAGCAACGACGCACTGGACGGCGTGCTCACGCGCCTGC
GCGAACCGCAAGCCAGCGCCTAA

Upstream 100 bases:

>100_bases
GGGCGCGAAGGCGTATCTCGATTTCGGCGCGGAGATGATCGCGCGCGTGCGACAGCTCGGCTGAGCACGTCACTGAAACA
GCAGGGAAGGGACAGCAAGG

Downstream 100 bases:

>100_bases
CCTGTTCCATACATTCCGGCAACCTATTCCTTGCGGTTGCCGGAAGGTTGTCGGTCTCACGCGACACGTATACAGCGACC
CGCTGATCTGCGCGATTACC

Product: exonuclease involved in chromosome partitioning ParB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MATMSTAKKKGLGRGLEALLGGPAEIVETSKQEGAPSVLRVDQLQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRR
VAEPDRYEIIAGERRYRASKLAGLDKVPVLVKDVADEAAAAMALIENIQREDLNPLEEAQGIMRLIREFRFTHEQAAESV
GRSRSAVSNLLRLLNLAAPVQTMLMAGDLDMGHARALLAVDGANQITLANQIVNKRLSVRETEKLVASTLKPFDLKSLKQ
KSGNGTRDVARLEEELSDTLGLSVQIKLGARGKGQLTIHFASNDALDGVLTRLREPQASA

Sequences:

>Translated_300_residues
MATMSTAKKKGLGRGLEALLGGPAEIVETSKQEGAPSVLRVDQLQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRR
VAEPDRYEIIAGERRYRASKLAGLDKVPVLVKDVADEAAAAMALIENIQREDLNPLEEAQGIMRLIREFRFTHEQAAESV
GRSRSAVSNLLRLLNLAAPVQTMLMAGDLDMGHARALLAVDGANQITLANQIVNKRLSVRETEKLVASTLKPFDLKSLKQ
KSGNGTRDVARLEEELSDTLGLSVQIKLGARGKGQLTIHFASNDALDGVLTRLREPQASA
>Mature_299_residues
ATMSTAKKKGLGRGLEALLGGPAEIVETSKQEGAPSVLRVDQLQPGKYQPRTRMDEGALQELAASIRAQGLMQPILVRRV
AEPDRYEIIAGERRYRASKLAGLDKVPVLVKDVADEAAAAMALIENIQREDLNPLEEAQGIMRLIREFRFTHEQAAESVG
RSRSAVSNLLRLLNLAAPVQTMLMAGDLDMGHARALLAVDGANQITLANQIVNKRLSVRETEKLVASTLKPFDLKSLKQK
SGNGTRDVARLEEELSDTLGLSVQIKLGARGKGQLTIHFASNDALDGVLTRLREPQASA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32572; Mature: 32441

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATMSTAKKKGLGRGLEALLGGPAEIVETSKQEGAPSVLRVDQLQPGKYQPRTRMDEGAL
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH
QELAASIRAQGLMQPILVRRVAEPDRYEIIAGERRYRASKLAGLDKVPVLVKDVADEAAA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHH
AMALIENIQREDLNPLEEAQGIMRLIREFRFTHEQAAESVGRSRSAVSNLLRLLNLAAPV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QTMLMAGDLDMGHARALLAVDGANQITLANQIVNKRLSVRETEKLVASTLKPFDLKSLKQ
HHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KSGNGTRDVARLEEELSDTLGLSVQIKLGARGKGQLTIHFASNDALDGVLTRLREPQASA
HCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATMSTAKKKGLGRGLEALLGGPAEIVETSKQEGAPSVLRVDQLQPGKYQPRTRMDEGAL
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH
QELAASIRAQGLMQPILVRRVAEPDRYEIIAGERRYRASKLAGLDKVPVLVKDVADEAAA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHH
AMALIENIQREDLNPLEEAQGIMRLIREFRFTHEQAAESVGRSRSAVSNLLRLLNLAAPV
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QTMLMAGDLDMGHARALLAVDGANQITLANQIVNKRLSVRETEKLVASTLKPFDLKSLKQ
HHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KSGNGTRDVARLEEELSDTLGLSVQIKLGARGKGQLTIHFASNDALDGVLTRLREPQASA
HCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232; 9683477 [H]