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The map label for this gene is yaeJ [C]

Identifier: 94312399

GI number: 94312399

Start: 3747791

End: 3748207

Strand: Reverse

Name: yaeJ [C]

Synonym: Rmet_3468

Alternate gene names: 94312399

Gene position: 3748207-3747791 (Counterclockwise)

Preceding gene: 94312400

Following gene: 94312398

Centisome position: 95.42

GC content: 67.63

Gene sequence:

>417_bases
ATGATGCGGCGCATGGCCGACGATTTTTTCATCCCACATCAGGAGTACGACATCACCGCGATCCGCGCCCAGGGCGCGGG
CGGGCAGAACATCAACAAGGTGTCGAACGCCGTGCATCTGCGCTATGACGTGCGTGCGTCGTCGCTGGAGCCCGATCACA
AGGAGCGGCTGCTGGCGCTGCACGACCATCGCATCACGCGCGACGGCGTGGTGGTCATCAAGGCCCAGCAGCATCGCAGC
CTGGAGTTGAACCGGGAAGAGGCAATCCGGCGGCTGCACGAACTGGTGCGCAGCGTGGCGGAGCCGCCGCGCGTGCGGCG
GGCCACGCGGCCGACGCTGGCGTCGCGCAAGCGCCGGATCGAGGCCAAGACCCAGCGCGGCCAGGTCAAGGCCCTGCGCG
GCAAGGTGCTTGATTAG

Upstream 100 bases:

>100_bases
CAAGCGCACCTACGATCCGCAGAACCTGTTCTCCACGAATCAGAACATCGCGCCGGCGTCCTGATACCGATTGCTCCACA
TCGTCGGCCACAGCGTTGCT

Downstream 100 bases:

>100_bases
GCAGTCGATCGCGCATTCGATCCGGTAGTCGGTTCGGTGCCCGCGCCCGGGATTCGAACAAACATTTCAAACGGACGGGG
CAGAGCGGACAGAAGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MMRRMADDFFIPHQEYDITAIRAQGAGGQNINKVSNAVHLRYDVRASSLEPDHKERLLALHDHRITRDGVVVIKAQQHRS
LELNREEAIRRLHELVRSVAEPPRVRRATRPTLASRKRRIEAKTQRGQVKALRGKVLD

Sequences:

>Translated_138_residues
MMRRMADDFFIPHQEYDITAIRAQGAGGQNINKVSNAVHLRYDVRASSLEPDHKERLLALHDHRITRDGVVVIKAQQHRS
LELNREEAIRRLHELVRSVAEPPRVRRATRPTLASRKRRIEAKTQRGQVKALRGKVLD
>Mature_138_residues
MMRRMADDFFIPHQEYDITAIRAQGAGGQNINKVSNAVHLRYDVRASSLEPDHKERLLALHDHRITRDGVVVIKAQQHRS
LELNREEAIRRLHELVRSVAEPPRVRRATRPTLASRKRRIEAKTQRGQVKALRGKVLD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=126, Percent_Identity=57.9365079365079, Blast_Score=147, Evalue=2e-37,
Organism=Drosophila melanogaster, GI19921098, Length=145, Percent_Identity=33.1034482758621, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15967; Mature: 15967

Theoretical pI: Translated: 11.68; Mature: 11.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRMADDFFIPHQEYDITAIRAQGAGGQNINKVSNAVHLRYDVRASSLEPDHKERLLAL
CCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHCEEEEEEECCCCCCCCCHHHHHHHH
HDHRITRDGVVVIKAQQHRSLELNREEAIRRLHELVRSVAEPPRVRRATRPTLASRKRRI
HCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH
EAKTQRGQVKALRGKVLD
HHHHHCCHHHHHCCCCCC
>Mature Secondary Structure
MMRRMADDFFIPHQEYDITAIRAQGAGGQNINKVSNAVHLRYDVRASSLEPDHKERLLAL
CCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHCEEEEEEECCCCCCCCCHHHHHHHH
HDHRITRDGVVVIKAQQHRSLELNREEAIRRLHELVRSVAEPPRVRRATRPTLASRKRRI
HCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHH
EAKTQRGQVKALRGKVLD
HHHHHCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]