Click here to switch to the map view.

The map label for this gene is 94312352

Identifier: 94312352

GI number: 94312352

Start: 3701799

End: 3702257

Strand: Reverse

Name: 94312352

Synonym: Rmet_3421

Alternate gene names: NA

Gene position: 3702257-3701799 (Counterclockwise)

Preceding gene: 94312353

Following gene: 94312351

Centisome position: 94.25

GC content: 63.83

Gene sequence:

>459_bases
ATGCGGCGAGCATTCTTTCGGGCCACGGCGGCGCTGGCCGCCATCGGCCTCACCGCCAAGGCAGCGGCACAGGAGAAGGC
GTCCATGCCTATCCTGGGCAAGGGCCGCGTCAAGGTCGTCTATCAGTTGTCAGAGGGCATCGATCAGGCCGTGCGTGCCA
TGGCCAATCTGCGCAATCACCTGAACGCCGCGCCGGATACGAAGATCGTCGTCGTAGCGTTTGGCTACGGCATCGACTTC
CTGGTGGAAGGCGCCAAGGATTCGCGCGGCAACACGTTCGAAGCCCCGGTGGCTGCGCTGGCGTCGTCGGGCGTGGAGTT
TCGCGTTTGCCACAACACGCTTGCCGCCCGCCACATTTCCGAGCAGAACCTGCTGATGGATGCCAAGGTGGTGCCCGCCG
GTGTGGTGGAAGTGGCACGCCTGCAGTTCAACGAAGGCTACGCTTACCTCAAGCCCTGA

Upstream 100 bases:

>100_bases
CCAAGGGCGACAAGGTCACTGTGACCTGGGTCGACAACCGCGGCGACAAGCGTACCGACGAAGCCACCATCGCCTGACCA
GGGCGAAGCGAGGAAGCACC

Downstream 100 bases:

>100_bases
TGTGTCCGCGAGGCGTTCGCCGCTGCAAGCGCGAGCGCCGAGCGCGATTTCCGGAAGTCCGGCCATGAGCCCCTGGGCCG
GACCCGCATAGCAAGCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRRAFFRATAALAAIGLTAKAAAQEKASMPILGKGRVKVVYQLSEGIDQAVRAMANLRNHLNAAPDTKIVVVAFGYGIDF
LVEGAKDSRGNTFEAPVAALASSGVEFRVCHNTLAARHISEQNLLMDAKVVPAGVVEVARLQFNEGYAYLKP

Sequences:

>Translated_152_residues
MRRAFFRATAALAAIGLTAKAAAQEKASMPILGKGRVKVVYQLSEGIDQAVRAMANLRNHLNAAPDTKIVVVAFGYGIDF
LVEGAKDSRGNTFEAPVAALASSGVEFRVCHNTLAARHISEQNLLMDAKVVPAGVVEVARLQFNEGYAYLKP
>Mature_152_residues
MRRAFFRATAALAAIGLTAKAAAQEKASMPILGKGRVKVVYQLSEGIDQAVRAMANLRNHLNAAPDTKIVVVAFGYGIDF
LVEGAKDSRGNTFEAPVAALASSGVEFRVCHNTLAARHISEQNLLMDAKVVPAGVVEVARLQFNEGYAYLKP

Specific function: Unknown

COG id: COG1416

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16243; Mature: 16243

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAFFRATAALAAIGLTAKAAAQEKASMPILGKGRVKVVYQLSEGIDQAVRAMANLRNH
CCCHHHHHHHHHHHHCCHHHHHHHHHCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHHHH
LNAAPDTKIVVVAFGYGIDFLVEGAKDSRGNTFEAPVAALASSGVEFRVCHNTLAARHIS
CCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHCC
EQNLLMDAKVVPAGVVEVARLQFNEGYAYLKP
CCCEEEECCCCCHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MRRAFFRATAALAAIGLTAKAAAQEKASMPILGKGRVKVVYQLSEGIDQAVRAMANLRNH
CCCHHHHHHHHHHHHCCHHHHHHHHHCCCCEECCCCEEEEEEHHHHHHHHHHHHHHHHHH
LNAAPDTKIVVVAFGYGIDFLVEGAKDSRGNTFEAPVAALASSGVEFRVCHNTLAARHIS
CCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHCC
EQNLLMDAKVVPAGVVEVARLQFNEGYAYLKP
CCCEEEECCCCCHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA