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The map label for this gene is soxX

Identifier: 94312350

GI number: 94312350

Start: 3700107

End: 3700769

Strand: Reverse

Name: soxX

Synonym: Rmet_3419

Alternate gene names: NA

Gene position: 3700769-3700107 (Counterclockwise)

Preceding gene: 94312351

Following gene: 94312349

Centisome position: 94.21

GC content: 64.1

Gene sequence:

>663_bases
ATGAACAAACTCCATACGATGGCGCTGGTCGCCATGGTGGCGCTCTCGGCTGCCGGCACGCAGGCGCTGGCGCAGACGGC
GGCAAAGGGTACGACGAAGGGCGCGACCACAAAGGTCACCGACGCCGACGTGCGCCAGATGATCGAATCGTCCTTCACGT
CCAAGGGACCCGCCACGGTCGAGGGTGTGCTGAACCAGGACGCCACGCAGAAGGCGTGCAGCCAGTACCCAGATCGCAGC
AAGGTGCCGGCCGCCGTGGCGAAGAAGGTGGAAGCCGCCGAGCTGAAGCAGGTGAAGTATCCCGCTGACAACAACTGGCT
CGGCGACTGGAAGGAAGGCGAGAAGATCGCGCAGAACGGCCGGGGCATGCAGTTCACCGACGCGGTGGGCGGCACCAACG
GCGGCAACTGCTACGCCTGCCACCAGCTGACCAAGGCCGAGATCTCGTTCGGCAATATCGGGCCGTCGCTCTACCAGTAC
GGAAAGCTGCGCGGCAACTCGCAGGAAGTGGTTCGCTACACGTGGGGCAAGATCTGGGATTCGAACGCGTTCAGCGCCTG
CTCCAACATGCCGCGCTTCGGCCACAAGGGCATCCTGACCGAGCAGCAGATCCGCGACGTGATGGCGCTGTTGCTCGATC
CGGCATCGCCGGTCAATCAGTAA

Upstream 100 bases:

>100_bases
ATGGTTCCGACGTGATTACCGCCCTGACGATGTTCCTGGCGAAGAACGCCAACGGCGGCACGTACGACGGCCCGAACATG
AAGCGCTAGGAGACCACGAC

Downstream 100 bases:

>100_bases
GGGGCGCATGATGCGGGCTCGGCGCGGCGTGGTCGCATGGATGCTCGCGCTGGTCGCGGCGTTTGGCGCGGCAGCGCAGT
TGGCTCAGGCCGCGGAAGTC

Product: sulfur oxidation protein SoxX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MNKLHTMALVAMVALSAAGTQALAQTAAKGTTKGATTKVTDADVRQMIESSFTSKGPATVEGVLNQDATQKACSQYPDRS
KVPAAVAKKVEAAELKQVKYPADNNWLGDWKEGEKIAQNGRGMQFTDAVGGTNGGNCYACHQLTKAEISFGNIGPSLYQY
GKLRGNSQEVVRYTWGKIWDSNAFSACSNMPRFGHKGILTEQQIRDVMALLLDPASPVNQ

Sequences:

>Translated_220_residues
MNKLHTMALVAMVALSAAGTQALAQTAAKGTTKGATTKVTDADVRQMIESSFTSKGPATVEGVLNQDATQKACSQYPDRS
KVPAAVAKKVEAAELKQVKYPADNNWLGDWKEGEKIAQNGRGMQFTDAVGGTNGGNCYACHQLTKAEISFGNIGPSLYQY
GKLRGNSQEVVRYTWGKIWDSNAFSACSNMPRFGHKGILTEQQIRDVMALLLDPASPVNQ
>Mature_220_residues
MNKLHTMALVAMVALSAAGTQALAQTAAKGTTKGATTKVTDADVRQMIESSFTSKGPATVEGVLNQDATQKACSQYPDRS
KVPAAVAKKVEAAELKQVKYPADNNWLGDWKEGEKIAQNGRGMQFTDAVGGTNGGNCYACHQLTKAEISFGNIGPSLYQY
GKLRGNSQEVVRYTWGKIWDSNAFSACSNMPRFGHKGILTEQQIRDVMALLLDPASPVNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR016823 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23618; Mature: 23618

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLHTMALVAMVALSAAGTQALAQTAAKGTTKGATTKVTDADVRQMIESSFTSKGPATV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
EGVLNQDATQKACSQYPDRSKVPAAVAKKVEAAELKQVKYPADNNWLGDWKEGEKIAQNG
HHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
RGMQFTDAVGGTNGGNCYACHQLTKAEISFGNIGPSLYQYGKLRGNSQEVVRYTWGKIWD
CCCEEECCCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
SNAFSACSNMPRFGHKGILTEQQIRDVMALLLDPASPVNQ
CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNKLHTMALVAMVALSAAGTQALAQTAAKGTTKGATTKVTDADVRQMIESSFTSKGPATV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHH
EGVLNQDATQKACSQYPDRSKVPAAVAKKVEAAELKQVKYPADNNWLGDWKEGEKIAQNG
HHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
RGMQFTDAVGGTNGGNCYACHQLTKAEISFGNIGPSLYQYGKLRGNSQEVVRYTWGKIWD
CCCEEECCCCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCC
SNAFSACSNMPRFGHKGILTEQQIRDVMALLLDPASPVNQ
CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]