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The map label for this gene is bkdR [H]

Identifier: 94312310

GI number: 94312310

Start: 3654864

End: 3655358

Strand: Reverse

Name: bkdR [H]

Synonym: Rmet_3379

Alternate gene names: 94312310

Gene position: 3655358-3654864 (Counterclockwise)

Preceding gene: 94312311

Following gene: 94312308

Centisome position: 93.06

GC content: 60.61

Gene sequence:

>495_bases
GTGAGCAAGGTGGAGCTGGACAAGATCGACCGAAAGATCCTGGAAGTCCTGCAGACCAATGGAAGGCTGACGAACCTGGA
AGTGGCGGAGCGCGTGAATCTGTCGCCAAGCCCTTGTCTGCGTCGCATCCGTCGTCTGGAGGAGATTGGCGTCATTCGCC
AGTATGCAGCGCTGCTGGAGCCCAACAAGATCGGGCTGGGCCTGCTCGCCTATATCAACGTCAGGCTGGAGAAGCAGGGG
GGCACCCCGAAAGGCAAGGCGCCGCTAGACCTCTTCCGGGCGGCCATCCAGACGTGGCCCGAAGTTGCGGCTTGCCACGC
CATGACCGGCGAGATGGACCTGCTGCTCAAGGTGTATGTCGAGGACATGGAACACTTTGCCCGCTTCATGCAGGAGCAAC
TGCTTGCGCATCCTTCCGTGATCGATGTGCGTTCGAGCTTCGCACTCGAATCGATCAAGGACACCACGGCGCTGCCAGTA
GCTGGCAACGCCTGA

Upstream 100 bases:

>100_bases
GTGATAGCGGGTATCGCATCAAAAAAATTGCGCATTTGTGCACGACTTGCTAAATTTGCGCAAAAAAATTGCCGACAAAC
ATATTGCGGAGCAACAAAAC

Downstream 100 bases:

>100_bases
TCGGCTGGCTGAACGCCATACCAAAGCAAACGGCGCACCGCGAGGGTGCGCCGTTTGCTTTTCCAAGCTAGCACGTTGGG
CGTGCTAGCGCGGCGTGTGT

Product: AsnC/Lrp family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSKVELDKIDRKILEVLQTNGRLTNLEVAERVNLSPSPCLRRIRRLEEIGVIRQYAALLEPNKIGLGLLAYINVRLEKQG
GTPKGKAPLDLFRAAIQTWPEVAACHAMTGEMDLLLKVYVEDMEHFARFMQEQLLAHPSVIDVRSSFALESIKDTTALPV
AGNA

Sequences:

>Translated_164_residues
MSKVELDKIDRKILEVLQTNGRLTNLEVAERVNLSPSPCLRRIRRLEEIGVIRQYAALLEPNKIGLGLLAYINVRLEKQG
GTPKGKAPLDLFRAAIQTWPEVAACHAMTGEMDLLLKVYVEDMEHFARFMQEQLLAHPSVIDVRSSFALESIKDTTALPV
AGNA
>Mature_163_residues
SKVELDKIDRKILEVLQTNGRLTNLEVAERVNLSPSPCLRRIRRLEEIGVIRQYAALLEPNKIGLGLLAYINVRLEKQGG
TPKGKAPLDLFRAAIQTWPEVAACHAMTGEMDLLLKVYVEDMEHFARFMQEQLLAHPSVIDVRSSFALESIKDTTALPVA
GNA

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=156, Percent_Identity=39.7435897435897, Blast_Score=124, Evalue=2e-30,
Organism=Escherichia coli, GI87081742, Length=155, Percent_Identity=40, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18320; Mature: 18188

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVELDKIDRKILEVLQTNGRLTNLEVAERVNLSPSPCLRRIRRLEEIGVIRQYAALLE
CCCCHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PNKIGLGLLAYINVRLEKQGGTPKGKAPLDLFRAAIQTWPEVAACHAMTGEMDLLLKVYV
CCCCCHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
EDMEHFARFMQEQLLAHPSVIDVRSSFALESIKDTTALPVAGNA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SKVELDKIDRKILEVLQTNGRLTNLEVAERVNLSPSPCLRRIRRLEEIGVIRQYAALLE
CCCHHHHHHHHHHHHHHCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PNKIGLGLLAYINVRLEKQGGTPKGKAPLDLFRAAIQTWPEVAACHAMTGEMDLLLKVYV
CCCCCHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
EDMEHFARFMQEQLLAHPSVIDVRSSFALESIKDTTALPVAGNA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]