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The map label for this gene is petA [H]

Identifier: 94312161

GI number: 94312161

Start: 3506582

End: 3507199

Strand: Reverse

Name: petA [H]

Synonym: Rmet_3230

Alternate gene names: 94312161

Gene position: 3507199-3506582 (Counterclockwise)

Preceding gene: 94312163

Following gene: 94312160

Centisome position: 89.29

GC content: 62.14

Gene sequence:

>618_bases
ATGAGTGACCAGCAAGACGTGAAGAGCGTGGACAAAGGTCGCCGCAATTGGTTGATCGCGACTTCTGTCGCAGGCGGCGT
AGGAGGCGTAGCAGTAGCAGTACCGTTCGTGAGTACCTTTGCACCTTCCGAGAAGGCGAAGGCTGCGGGCGCACCGGTCG
AGGCGGACATTGGCGCCCTGAAGCCCGGTGAGATGATGACGGTGGAGTGGCGTGGCAAGCCAGTCTGGATTCTGCGGCGC
ACGCCGGAGATGATGGCTTCCCTGAAGAAGACCGACGCCGAAGTCGCAGACCCTAATTCCGACGTCCCCTTCACGATGCC
GACGCCGGAGTACTGCAAGAACGAAAGCCGTTCCCGTGCCGACCACAAGGACCTGCTGGTCGTGGTTGGAATCTGTTCCC
ACCTCGGCTGCTCGCCATCCGGCCCATTTCCCGCAGGCGCCAACCCTCAGCTCGGCGCTGATCCCGGCTTCCTCTGCCCG
TGCCATGGCTCGACCTTCGACCTGGCTGGCCGCGTGTTCAAGAACAAACCGGCCCCGCAGAACCTTGACGTACCCCCGTA
CCAGTTCCTGACCGACACCAAGCTCGTGATCGGCAAGGACGAGAAAGGAGAAGCCTGA

Upstream 100 bases:

>100_bases
CGGTCGGCTATCCGTAGTTCGCCTATCGTCGCCAGATGTGCCTCAGGTATAATTTTTTGTTGACGCAAGATTCAATTGAT
GACATCCCCTGGGGTTTGGA

Downstream 100 bases:

>100_bases
TCATGGCGGCCGAAAAAGAAGTCAAGACTACCGGGCTGCTGGGTTGGATCGACGCCCGCTTCCCAGCCACCCAACTTTGG
GAAGACCACCTCTCCAAGTA

Product: Ubiquinol-cytochrome c reductase, iron-sulfur subunit (Rieske Fe-S protein)

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSDQQDVKSVDKGRRNWLIATSVAGGVGGVAVAVPFVSTFAPSEKAKAAGAPVEADIGALKPGEMMTVEWRGKPVWILRR
TPEMMASLKKTDAEVADPNSDVPFTMPTPEYCKNESRSRADHKDLLVVVGICSHLGCSPSGPFPAGANPQLGADPGFLCP
CHGSTFDLAGRVFKNKPAPQNLDVPPYQFLTDTKLVIGKDEKGEA

Sequences:

>Translated_205_residues
MSDQQDVKSVDKGRRNWLIATSVAGGVGGVAVAVPFVSTFAPSEKAKAAGAPVEADIGALKPGEMMTVEWRGKPVWILRR
TPEMMASLKKTDAEVADPNSDVPFTMPTPEYCKNESRSRADHKDLLVVVGICSHLGCSPSGPFPAGANPQLGADPGFLCP
CHGSTFDLAGRVFKNKPAPQNLDVPPYQFLTDTKLVIGKDEKGEA
>Mature_204_residues
SDQQDVKSVDKGRRNWLIATSVAGGVGGVAVAVPFVSTFAPSEKAKAAGAPVEADIGALKPGEMMTVEWRGKPVWILRRT
PEMMASLKKTDAEVADPNSDVPFTMPTPEYCKNESRSRADHKDLLVVVGICSHLGCSPSGPFPAGANPQLGADPGFLCPC
HGSTFDLAGRVFKNKPAPQNLDVPPYQFLTDTKLVIGKDEKGEA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=202, Percent_Identity=26.7326732673267, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17540418, Length=179, Percent_Identity=36.8715083798883, Blast_Score=90, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6320811, Length=192, Percent_Identity=35.4166666666667, Blast_Score=100, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24580896, Length=167, Percent_Identity=34.1317365269461, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 21777; Mature: 21646

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQQDVKSVDKGRRNWLIATSVAGGVGGVAVAVPFVSTFAPSEKAKAAGAPVEADIGAL
CCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCC
KPGEMMTVEWRGKPVWILRRTPEMMASLKKTDAEVADPNSDVPFTMPTPEYCKNESRSRA
CCCCEEEEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHCCCCCCCC
DHKDLLVVVGICSHLGCSPSGPFPAGANPQLGADPGFLCPCHGSTFDLAGRVFKNKPAPQ
CCHHHHHEEEHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCC
NLDVPPYQFLTDTKLVIGKDEKGEA
CCCCCCHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure 
SDQQDVKSVDKGRRNWLIATSVAGGVGGVAVAVPFVSTFAPSEKAKAAGAPVEADIGAL
CCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCC
KPGEMMTVEWRGKPVWILRRTPEMMASLKKTDAEVADPNSDVPFTMPTPEYCKNESRSRA
CCCCEEEEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHCCCCCCCC
DHKDLLVVVGICSHLGCSPSGPFPAGANPQLGADPGFLCPCHGSTFDLAGRVFKNKPAPQ
CCHHHHHEEEHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCC
NLDVPPYQFLTDTKLVIGKDEKGEA
CCCCCCHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA