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The map label for this gene is coq7

Identifier: 94312069

GI number: 94312069

Start: 3402642

End: 3403265

Strand: Reverse

Name: coq7

Synonym: Rmet_3138

Alternate gene names: 94312069

Gene position: 3403265-3402642 (Counterclockwise)

Preceding gene: 94312071

Following gene: 94312068

Centisome position: 86.64

GC content: 65.71

Gene sequence:

>624_bases
ATGGATACGTTGATCCGAGAATTCGATGTCGCGTTGCGCGCGATTGCCGGTGCGACCCGCGCGGAGCGCGCCAACCCTGC
AGACAGGCTGGCTCCGGAAACGGAGCAGATGAACCCCGAGGAGCGTCGCCACGTATCCGGCCTCATGCGCATCAACCATG
TTGGAGAGGTTTGCGCCCAGGCCCTCTACCAGGCGCAGAAGCTGACCGCGCGAACGCCGGCCGTGCGCGCGCAGATGGAT
GCTGCCGCTAAAGAGGAAGAGGATCATCTGGCCTGGTGCGCGGACCGCCTGCGTGAACTGGGCTCGCGTCCGAGCCTGCT
GAATCCCGTCTGGTATGCCGGCGCGTTCGCGATCGGCGTTTTGGCGGGACGCGCCGGCGACAAGGTCAGCCTTGGCTTCG
TGGCCGAGACCGAGCGTCAGGTCGAGCATCATCTGACCAGCCACCTCGACCGCTTGCCCACCACGGACAGCCGCTCGCGC
GCAATCCTTGAACAGATGCGCGACGACGAGGTCCGCCACGGCGATGCCGCGAGGAACGCAGGGGGTATCCCACTGCCGGG
ACCAGTTCGCGCATTGATGCAAGTCGCATCGCGCGTCATGACCACCACCGCCTATCGCATCTGA

Upstream 100 bases:

>100_bases
CGCGGGTACAATGGGGGAATTCCCGAAGGCGCGTTTGGTGCGACCTACCTCTTCAGTGGGGCGAAGGTTCGATATGCGCG
CAGACCATCCCTAGACAGAC

Downstream 100 bases:

>100_bases
TCGATAAGGATCGGCGCGTCTCGAAGCGCTTCCTCGCGATCCATTTCGCGATGGATCGTGGACCTGCCTGTGGTGGTTGT
GGAAAAGTCCCCTGAGCCCT

Product: Ubiquinone biosynthesis protein COQ7-like protein

Products: NA

Alternate protein names: 5-demethoxyubiquinone hydroxylase; DMQ hydroxylase

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MDTLIREFDVALRAIAGATRAERANPADRLAPETEQMNPEERRHVSGLMRINHVGEVCAQALYQAQKLTARTPAVRAQMD
AAAKEEEDHLAWCADRLRELGSRPSLLNPVWYAGAFAIGVLAGRAGDKVSLGFVAETERQVEHHLTSHLDRLPTTDSRSR
AILEQMRDDEVRHGDAARNAGGIPLPGPVRALMQVASRVMTTTAYRI

Sequences:

>Translated_207_residues
MDTLIREFDVALRAIAGATRAERANPADRLAPETEQMNPEERRHVSGLMRINHVGEVCAQALYQAQKLTARTPAVRAQMD
AAAKEEEDHLAWCADRLRELGSRPSLLNPVWYAGAFAIGVLAGRAGDKVSLGFVAETERQVEHHLTSHLDRLPTTDSRSR
AILEQMRDDEVRHGDAARNAGGIPLPGPVRALMQVASRVMTTTAYRI
>Mature_207_residues
MDTLIREFDVALRAIAGATRAERANPADRLAPETEQMNPEERRHVSGLMRINHVGEVCAQALYQAQKLTARTPAVRAQMD
AAAKEEEDHLAWCADRLRELGSRPSLLNPVWYAGAFAIGVLAGRAGDKVSLGFVAETERQVEHHLTSHLDRLPTTDSRSR
AILEQMRDDEVRHGDAARNAGGIPLPGPVRALMQVASRVMTTTAYRI

Specific function: Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol

COG id: COG2941

COG function: function code H; Ubiquinone biosynthesis protein COQ7

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COQ7 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COQ7_RALME (Q1LIL6)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_585279.1
- ProteinModelPortal:   Q1LIL6
- STRING:   Q1LIL6
- GeneID:   4039967
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_3138
- eggNOG:   COG2941
- HOGENOM:   HBG289195
- OMA:   YQGQALT
- PhylomeDB:   Q1LIL6
- ProtClustDB:   CLSK866016
- BioCyc:   RMET266264:RMET_3138-MONOMER
- HAMAP:   MF_01658
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR011566
- Gene3D:   G3DSA:1.20.1260.10
- PANTHER:   PTHR11237

Pfam domain/function: PF03232 COQ7; SSF47240 Ferritin/RR_like

EC number: 1.14.13.-

Molecular weight: Translated: 22809; Mature: 22809

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLIREFDVALRAIAGATRAERANPADRLAPETEQMNPEERRHVSGLMRINHVGEVCAQ
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALYQAQKLTARTPAVRAQMDAAAKEEEDHLAWCADRLRELGSRPSLLNPVWYAGAFAIGV
HHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LAGRAGDKVSLGFVAETERQVEHHLTSHLDRLPTTDSRSRAILEQMRDDEVRHGDAARNA
HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHCCC
GGIPLPGPVRALMQVASRVMTTTAYRI
CCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTLIREFDVALRAIAGATRAERANPADRLAPETEQMNPEERRHVSGLMRINHVGEVCAQ
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALYQAQKLTARTPAVRAQMDAAAKEEEDHLAWCADRLRELGSRPSLLNPVWYAGAFAIGV
HHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LAGRAGDKVSLGFVAETERQVEHHLTSHLDRLPTTDSRSRAILEQMRDDEVRHGDAARNA
HHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHCCC
GGIPLPGPVRALMQVASRVMTTTAYRI
CCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA