| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311972
Identifier: 94311972
GI number: 94311972
Start: 3296115
End: 3297308
Strand: Reverse
Name: 94311972
Synonym: Rmet_3041
Alternate gene names: NA
Gene position: 3297308-3296115 (Counterclockwise)
Preceding gene: 94311975
Following gene: 94311971
Centisome position: 83.94
GC content: 57.71
Gene sequence:
>1194_bases GTGCCTACAACCATCACGTTTTTTCCCGTCGACAACGGGGACATGACCCTCATCAAGTTCGGCGATCTCGACGCGACGAC TCTGCTGATCGACGTAAACATCAGGCAAGACGCCGACGACCCTGACGGGGAGGCGCGCGATGTCGCCAAGGATTTGCGCG AACGACTGAAGAAGGATGAGAACGGCAGGCCGTATGTCGATGCGTTCCTGCTGAGCCACCCGGATCAAGACCATTGCCGA GGGTTGAAGCGACACTTCTACCTAGGGCCACTCGACAAGTACCCGGACGACAAGAAGGACGACAAGGACAAGAAAATCGT GATCCGCGAGATGTGGTCGTCCCCGATCGTGTTTCGACGCGCCAGCAAGACGCACACCTTGAGCGACGACGCCAAGGCAT TCAACACGGAGGCGCGTCGGCGCGTGCAACTGAACCGTGACAAGAATTTCGCCGTCGGGAACGGTGACCGCATTCAGATC ATGGGCGAGGACATCGACGGAAAAACCGATGATCTCACTTCGATTGTGCGGAAGGTGGACACGCGCTTTTCAACGATCAA TGGCAAGAGTTCCGCATTCTTTTCTGCGTTTCTTTTGGCTCCACTGGACGCCCAGGATGACGAGGAAGAGGAAGAGTGCC TGGTCAAGAACCAGTCCAGCGTTATTCTGAACATCACGTTGGCGGCTGACGCGCAGACGCCGGATGGTGCGAAATTCCTT ACTGGTGGCGATGCTGAGGTGTTCATCTGGAACCGCCAGTGGCAACGCCACAAGGCTGAAGCAGATGTGCTTGAGTACGA CATCATGCAGGCGCCTCATCATTGTTCCTGGCATTCGCTGTCCTATGACAGCTGGTCCGACTACCGTGAAAAAGCCAAGC TCGATGCTGATGCTCGCAAGGCGCTTTCGCAGACCCGTGACGGCGCCGTCATCGTCGCCAGCTGCAAGCCGATTGCAGAT GATGACAGCGATCCGCCCTGCATCCGTGCGAAGCGTGAGTACGTGACGATCGTGGACGAAGCAAAAGGCGAGTTCTACTG CACAGGCGAGTACCCCAGCGAAAAGTCCGTGGAACCGCTCGTTTTCACCGTAACCGCTCAGGGTGTGCAACCTCCCTCGA AGAAGGAGTCCGGATCGAAGGCCGCTGCCGTGGTGACCTCTGCGCGCACCCCCATGCCGCACGGAGCATCATGA
Upstream 100 bases:
>100_bases GGTTTTTGCATTAGTCACGCCTAAAAAGTAGACGGATATAAAAAATCGTCGTACATTAACTATACGCGATCATCCTTCGG TCGTCTACCCGGAGACCCCA
Downstream 100 bases:
>100_bases CGGGCACCATCGCAGACGCACTGCATCAACTTCAGCGGCATCGAGGCCTTATCCGCGTTGGCGAGCCAAGGACAACTGGT GCATCGACGGAGATTGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MPTTITFFPVDNGDMTLIKFGDLDATTLLIDVNIRQDADDPDGEARDVAKDLRERLKKDENGRPYVDAFLLSHPDQDHCR GLKRHFYLGPLDKYPDDKKDDKDKKIVIREMWSSPIVFRRASKTHTLSDDAKAFNTEARRRVQLNRDKNFAVGNGDRIQI MGEDIDGKTDDLTSIVRKVDTRFSTINGKSSAFFSAFLLAPLDAQDDEEEEECLVKNQSSVILNITLAADAQTPDGAKFL TGGDAEVFIWNRQWQRHKAEADVLEYDIMQAPHHCSWHSLSYDSWSDYREKAKLDADARKALSQTRDGAVIVASCKPIAD DDSDPPCIRAKREYVTIVDEAKGEFYCTGEYPSEKSVEPLVFTVTAQGVQPPSKKESGSKAAAVVTSARTPMPHGAS
Sequences:
>Translated_397_residues MPTTITFFPVDNGDMTLIKFGDLDATTLLIDVNIRQDADDPDGEARDVAKDLRERLKKDENGRPYVDAFLLSHPDQDHCR GLKRHFYLGPLDKYPDDKKDDKDKKIVIREMWSSPIVFRRASKTHTLSDDAKAFNTEARRRVQLNRDKNFAVGNGDRIQI MGEDIDGKTDDLTSIVRKVDTRFSTINGKSSAFFSAFLLAPLDAQDDEEEEECLVKNQSSVILNITLAADAQTPDGAKFL TGGDAEVFIWNRQWQRHKAEADVLEYDIMQAPHHCSWHSLSYDSWSDYREKAKLDADARKALSQTRDGAVIVASCKPIAD DDSDPPCIRAKREYVTIVDEAKGEFYCTGEYPSEKSVEPLVFTVTAQGVQPPSKKESGSKAAAVVTSARTPMPHGAS >Mature_396_residues PTTITFFPVDNGDMTLIKFGDLDATTLLIDVNIRQDADDPDGEARDVAKDLRERLKKDENGRPYVDAFLLSHPDQDHCRG LKRHFYLGPLDKYPDDKKDDKDKKIVIREMWSSPIVFRRASKTHTLSDDAKAFNTEARRRVQLNRDKNFAVGNGDRIQIM GEDIDGKTDDLTSIVRKVDTRFSTINGKSSAFFSAFLLAPLDAQDDEEEEECLVKNQSSVILNITLAADAQTPDGAKFLT GGDAEVFIWNRQWQRHKAEADVLEYDIMQAPHHCSWHSLSYDSWSDYREKAKLDADARKALSQTRDGAVIVASCKPIADD DSDPPCIRAKREYVTIVDEAKGEFYCTGEYPSEKSVEPLVFTVTAQGVQPPSKKESGSKAAAVVTSARTPMPHGAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44423; Mature: 44292
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTITFFPVDNGDMTLIKFGDLDATTLLIDVNIRQDADDPDGEARDVAKDLRERLKKDE CCCEEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC NGRPYVDAFLLSHPDQDHCRGLKRHFYLGPLDKYPDDKKDDKDKKIVIREMWSSPIVFRR CCCCEEEEHECCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE ASKTHTLSDDAKAFNTEARRRVQLNRDKNFAVGNGDRIQIMGEDIDGKTDDLTSIVRKVD CCCCCCCCCHHHHHCHHHHHEEEECCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHH TRFSTINGKSSAFFSAFLLAPLDAQDDEEEEECLVKNQSSVILNITLAADAQTPDGAKFL HHHEECCCCCHHHHHHHEECCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCCEEE TGGDAEVFIWNRQWQRHKAEADVLEYDIMQAPHHCSWHSLSYDSWSDYREKAKLDADARK ECCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH ALSQTRDGAVIVASCKPIADDDSDPPCIRAKREYVTIVDEAKGEFYCTGEYPSEKSVEPL HHHHCCCCEEEEEECCCCCCCCCCCCCEECCCEEEEEEECCCCCEEEECCCCCCCCCCCE VFTVTAQGVQPPSKKESGSKAAAVVTSARTPMPHGAS EEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure PTTITFFPVDNGDMTLIKFGDLDATTLLIDVNIRQDADDPDGEARDVAKDLRERLKKDE CCEEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC NGRPYVDAFLLSHPDQDHCRGLKRHFYLGPLDKYPDDKKDDKDKKIVIREMWSSPIVFRR CCCCEEEEHECCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEE ASKTHTLSDDAKAFNTEARRRVQLNRDKNFAVGNGDRIQIMGEDIDGKTDDLTSIVRKVD CCCCCCCCCHHHHHCHHHHHEEEECCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHHHH TRFSTINGKSSAFFSAFLLAPLDAQDDEEEEECLVKNQSSVILNITLAADAQTPDGAKFL HHHEECCCCCHHHHHHHEECCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCCEEE TGGDAEVFIWNRQWQRHKAEADVLEYDIMQAPHHCSWHSLSYDSWSDYREKAKLDADARK ECCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH ALSQTRDGAVIVASCKPIADDDSDPPCIRAKREYVTIVDEAKGEFYCTGEYPSEKSVEPL HHHHCCCCEEEEEECCCCCCCCCCCCCEECCCEEEEEEECCCCCEEEECCCCCCCCCCCE VFTVTAQGVQPPSKKESGSKAAAVVTSARTPMPHGAS EEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA