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The map label for this gene is tniA

Identifier: 94311942

GI number: 94311942

Start: 3265914

End: 3267443

Strand: Reverse

Name: tniA

Synonym: Rmet_3010

Alternate gene names: NA

Gene position: 3267443-3265914 (Counterclockwise)

Preceding gene: 94311943

Following gene: 94311941

Centisome position: 83.18

GC content: 64.44

Gene sequence:

>1530_bases
TTGGGGCTGTCCCGGCGGCAGGTCTACGTCCTGATCCGCCGTGCCCGGCTAGGATCGGGGCTGGTCACTGACTTGGCTCT
TGGGCAGTCGAGCGGTGGCAAAGGTAAAGGCCGCTTGCCGGAGTCGGTCGAACGAATCATCCGCGAGTTACTGCAAAAGC
GCTTCCTGACCAAGCAGAAGCGTAGCTTGGCGGCGTTCCACCGCGAAGTTGTGCGGGCGTGCAAGCTGCAAAAGCTGCGG
GTGCCGGCGCGCAACACGGTGGCTCTGCGGATCGCCGGCCTCGATCCGCGCGAGGTCACTCACCGCCGGGAAGGACAAGA
TGCCGCCCGCGACCTGCAAGGTGTTGGTGGTGTTCCGCCACCCGTCTCCGCGCCGCTGGAGCAGGTGCAGATCGACCACA
CAGTCATCGACCTGATCGTGGTGGACGAGCGCGACCGGCAACCGATTGGCCGTCCATACCTGACCCTCGCCATCGACGTA
TTCACCCGCTGCGTGGTTGGCATGGTCGTTACGCTGGAAGCCCCGTCCGCCGTCTCGGTCGGCTTGTGCTTGGTGCATGC
CGCCTGCGACAAGCGCCCTTGGTTGGAAGGGTTGAACGTAGAGATGGATTGGCCGATGAGCGGCAAGCCCAGACTGCTCT
ACTTGGACAACGCGGCTGAGTTCAAGAGCGAGGCGCTGCGCCGTGGCTGCGAGCAGCATGGCATCCGGTTGGACTATCGC
CCGCTTGGGCAGCCGCACTACGGCGGTATCGTGGAACGGATCATCGGCACGGCGATGCAGATGATCCACGACGAATTGCC
GGGGACGACCTTCTCCAATCCTGACCAGCGCGGGGAATACGCCTCCGAGAAGATGGCCGCCCTGACACTGCGCGAGCTGG
AGCGCTGGCTCACATTGGCGGTCGGCACCTATCACGGCTCCGTGCACAACGGCCTGCTCCAACCGCCGGCCGCGCGCTGG
GCCGAAGCTATCACGCGGACCGGCGTGCCAACCGTCATCACTCGCGCTACGGCTTTTCTGGTCGATTTTCTGCCCATCAT
CCGCCGCACGCTGACCCGCACCGGCTTCGTCATCGACCACATCCACTACTACGCCGATGCGCTCAAGCCGTGGATAGCTC
GGCGGGACCGCTTGCCTGCGTTCCTGATCCGGCGCGACCCGCGCGACATCAGCCGCATATGGGTGCTGGAACCAGAGGGG
CAGCACTACCTGGAAATTCCCTACCGTACCTTGTCGCACCCGGCTGTCACCCTCTGGGAACAACGACAGGCGCTGGCGAA
ATTGCGGCAGCAAGGGCGCGAACAGGTGGATGAGTCGGCGTTGTTCCGCATGATCGGCCAGATGCGCGAAATCGTTACCA
CCGCGCAGAAGGCTACGCGCAAGGCGCGGCGCGACGCGGATCGACGCCAGCATCTCAAGGCAACGGCAACGCCTGTCAAA
ACCACGCCACCACCGGGCGCTGACATGGATGGGCAGCAGGCAGACAACCAGCCGCCGGCCAAACCGTTCGACCAGATTGA
GGAGTGGTAG

Upstream 100 bases:

>100_bases
ACAGGCATGGGAGCGTGCGCGTCGTCGCGCGGAGATCATTGGGCCGTTGGCGCAGTCGGAGACGGTTGGGCATGAAGCGG
CCGACGCGGCAGCCCAGGCA

Downstream 100 bases:

>100_bases
CCGTGGAAGAATATCCCATCATCGACTTGTCCCACCTGCTGCCGGCGGCCCAGGGCTTGGCCCGTCTCCCGGCGGACGAA
CGCATCCATCGCCTTCGCGC

Product: transposase (Tn6048)

Products: NA

Alternate protein names: ORF 480 [H]

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MGLSRRQVYVLIRRARLGSGLVTDLALGQSSGGKGKGRLPESVERIIRELLQKRFLTKQKRSLAAFHREVVRACKLQKLR
VPARNTVALRIAGLDPREVTHRREGQDAARDLQGVGGVPPPVSAPLEQVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDV
FTRCVVGMVVTLEAPSAVSVGLCLVHAACDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYR
PLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGEYASEKMAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARW
AEAITRTGVPTVITRATAFLVDFLPIIRRTLTRTGFVIDHIHYYADALKPWIARRDRLPAFLIRRDPRDISRIWVLEPEG
QHYLEIPYRTLSHPAVTLWEQRQALAKLRQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATATPVK
TTPPPGADMDGQQADNQPPAKPFDQIEEW

Sequences:

>Translated_509_residues
MGLSRRQVYVLIRRARLGSGLVTDLALGQSSGGKGKGRLPESVERIIRELLQKRFLTKQKRSLAAFHREVVRACKLQKLR
VPARNTVALRIAGLDPREVTHRREGQDAARDLQGVGGVPPPVSAPLEQVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDV
FTRCVVGMVVTLEAPSAVSVGLCLVHAACDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYR
PLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGEYASEKMAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARW
AEAITRTGVPTVITRATAFLVDFLPIIRRTLTRTGFVIDHIHYYADALKPWIARRDRLPAFLIRRDPRDISRIWVLEPEG
QHYLEIPYRTLSHPAVTLWEQRQALAKLRQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATATPVK
TTPPPGADMDGQQADNQPPAKPFDQIEEW
>Mature_508_residues
GLSRRQVYVLIRRARLGSGLVTDLALGQSSGGKGKGRLPESVERIIRELLQKRFLTKQKRSLAAFHREVVRACKLQKLRV
PARNTVALRIAGLDPREVTHRREGQDAARDLQGVGGVPPPVSAPLEQVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDVF
TRCVVGMVVTLEAPSAVSVGLCLVHAACDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYRP
LGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGEYASEKMAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWA
EAITRTGVPTVITRATAFLVDFLPIIRRTLTRTGFVIDHIHYYADALKPWIARRDRLPAFLIRRDPRDISRIWVLEPEGQ
HYLEIPYRTLSHPAVTLWEQRQALAKLRQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATATPVKT
TPPPGADMDGQQADNQPPAKPFDQIEEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR009004 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 57393; Mature: 57262

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSRRQVYVLIRRARLGSGLVTDLALGQSSGGKGKGRLPESVERIIRELLQKRFLTKQK
CCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RSLAAFHREVVRACKLQKLRVPARNTVALRIAGLDPREVTHRREGQDAARDLQGVGGVPP
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCC
PVSAPLEQVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDVFTRCVVGMVVTLEAPSAVSV
CCCCCHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHH
GLCLVHAACDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYR
HHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEECC
PLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGEYASEKMAALTLRELERWLTLA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
VGTYHGSVHNGLLQPPAARWAEAITRTGVPTVITRATAFLVDFLPIIRRTLTRTGFVIDH
HHHHCCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
IHYYADALKPWIARRDRLPAFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWE
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEECCHHHHCCCHHHHHH
QRQALAKLRQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATATPVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TTPPPGADMDGQQADNQPPAKPFDQIEEW
CCCCCCCCCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
GLSRRQVYVLIRRARLGSGLVTDLALGQSSGGKGKGRLPESVERIIRELLQKRFLTKQK
CCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RSLAAFHREVVRACKLQKLRVPARNTVALRIAGLDPREVTHRREGQDAARDLQGVGGVPP
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCC
PVSAPLEQVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDVFTRCVVGMVVTLEAPSAVSV
CCCCCHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHH
GLCLVHAACDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYR
HHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEECC
PLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGEYASEKMAALTLRELERWLTLA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
VGTYHGSVHNGLLQPPAARWAEAITRTGVPTVITRATAFLVDFLPIIRRTLTRTGFVIDH
HHHHCCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
IHYYADALKPWIARRDRLPAFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWE
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEECCHHHHCCCHHHHHH
QRQALAKLRQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATATPVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TTPPPGADMDGQQADNQPPAKPFDQIEEW
CCCCCCCCCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170815 [H]