| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is yceI [C]
Identifier: 94311886
GI number: 94311886
Start: 3212633
End: 3213208
Strand: Reverse
Name: yceI [C]
Synonym: Rmet_2954
Alternate gene names: 94311886
Gene position: 3213208-3212633 (Counterclockwise)
Preceding gene: 94311887
Following gene: 94311885
Centisome position: 81.8
GC content: 62.33
Gene sequence:
>576_bases ATGAAACGCATGTCTCGCCCTGGCGTGATGCTCGTGTCGGCCGCACTGGTCACCGCCGGGCTGGCCGCCAATATCGGCTG GGCCCAGATCGACACCGCCAAGAGCTCGGTCACCGCAACCGCTCGCCAGATCGGCGTGCCGATGGAGGGCAAGTTCAAGA AGTTCGACGCCACGGTCGACTTCGATCCCGCCAAGCTGGCAACGTCGGCGGCCAAGGTCGAGATCGACGTGTCGAGCTTC GAGATCGGCGACGCGGAAACGACCAAGGAGGTCAAGGGTCGCGAATGGTTCGACGCTGCGAAATTTCCGAAAGCCGTTTT CCAGTCCACCAGCATCAAGGCTGGCGCTGCGGGCAAGTATGACGTTGCCGGCAAGCTGACCATCAAGGGCAAGACCGTGG ACGTGGTGGTGCCGGCTTCGTACAAGCAGGACGCCGGCGGCCAGGTCTTCGAAGGCGTGCTGCCGATCAAGCGCACAGTG TTCAACATCGGCGACGGCGAATGGAAGGACACTTCCGTGGTCGCCGACGACGTGCAGATCAAGTTCCGTATCGTTACCCC GGTCAAGAAGGGGTGA
Upstream 100 bases:
>100_bases GCGATCAAGCACCAGGTGATCGACCGCGATGGCACGCTCGGACGCATGATCCCGTTCCTGCGCTAACCGCTTGATCCATC TATTCGCACTGGAGTCAAAG
Downstream 100 bases:
>100_bases GGCGCCAGCGGTCCCCGGACCGCCCGTTTCACCTGAAGTCATCCTTTTGCCGGTTTTATCAGACCTTCCTATCCAACCCC CAGACGGGAGACCTTATATG
Product: YceI-like periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKRMSRPGVMLVSAALVTAGLAANIGWAQIDTAKSSVTATARQIGVPMEGKFKKFDATVDFDPAKLATSAAKVEIDVSSF EIGDAETTKEVKGREWFDAAKFPKAVFQSTSIKAGAAGKYDVAGKLTIKGKTVDVVVPASYKQDAGGQVFEGVLPIKRTV FNIGDGEWKDTSVVADDVQIKFRIVTPVKKG
Sequences:
>Translated_191_residues MKRMSRPGVMLVSAALVTAGLAANIGWAQIDTAKSSVTATARQIGVPMEGKFKKFDATVDFDPAKLATSAAKVEIDVSSF EIGDAETTKEVKGREWFDAAKFPKAVFQSTSIKAGAAGKYDVAGKLTIKGKTVDVVVPASYKQDAGGQVFEGVLPIKRTV FNIGDGEWKDTSVVADDVQIKFRIVTPVKKG >Mature_191_residues MKRMSRPGVMLVSAALVTAGLAANIGWAQIDTAKSSVTATARQIGVPMEGKFKKFDATVDFDPAKLATSAAKVEIDVSSF EIGDAETTKEVKGREWFDAAKFPKAVFQSTSIKAGAAGKYDVAGKLTIKGKTVDVVVPASYKQDAGGQVFEGVLPIKRTV FNIGDGEWKDTSVVADDVQIKFRIVTPVKKG
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20302; Mature: 20302
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMSRPGVMLVSAALVTAGLAANIGWAQIDTAKSSVTATARQIGVPMEGKFKKFDATVD CCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEECCEEC FDPAKLATSAAKVEIDVSSFEIGDAETTKEVKGREWFDAAKFPKAVFQSTSIKAGAAGKY CCHHHHHCCEEEEEEEECEEECCCCCCHHHHCCCCHHHHHHCCHHHHHCCCCCCCCCCCC DVAGKLTIKGKTVDVVVPASYKQDAGGQVFEGVLPIKRTVFNIGDGEWKDTSVVADDVQI CCEEEEEECCCEEEEEECCCCCCCCCCHHHHCCCCCHHHEEECCCCCCCCCEEEECCEEE KFRIVTPVKKG EEEEECCCCCC >Mature Secondary Structure MKRMSRPGVMLVSAALVTAGLAANIGWAQIDTAKSSVTATARQIGVPMEGKFKKFDATVD CCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEECCEEC FDPAKLATSAAKVEIDVSSFEIGDAETTKEVKGREWFDAAKFPKAVFQSTSIKAGAAGKY CCHHHHHCCEEEEEEEECEEECCCCCCHHHHCCCCHHHHHHCCHHHHHCCCCCCCCCCCC DVAGKLTIKGKTVDVVVPASYKQDAGGQVFEGVLPIKRTVFNIGDGEWKDTSVVADDVQI CCEEEEEECCCEEEEEECCCCCCCCCCHHHHCCCCCHHHEEECCCCCCCCCEEEECCEEE KFRIVTPVKKG EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA