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The map label for this gene is lrgB [H]

Identifier: 94311863

GI number: 94311863

Start: 3187393

End: 3188118

Strand: Direct

Name: lrgB [H]

Synonym: Rmet_2931

Alternate gene names: 94311863

Gene position: 3187393-3188118 (Clockwise)

Preceding gene: 94311862

Following gene: 94311864

Centisome position: 81.14

GC content: 66.39

Gene sequence:

>726_bases
ATGATGTCGCCACGCCTGAACGAAATCTGGGTCTACCTGGCAGCGAGTCCGCTGATCGGGCTCACCGCCACGTTGATCGC
CTACGTGTTCGCGTTCCGCATCTACGAGCGCGCGCGTTTCTCGCCGCTGGCCAATCCGGTGATGATCTCGGTGGCGATCC
TGGTGACCGTGCTGACCGTCACGGGTACGCCGTACAAGACCTACTTCGACGGCGCGCAGTTCGTGCACTTCCTGCTCGGC
CCCGCGACGGTGGCGCTGGCCGTGCCGCTCTACACGCAATTGCCGAAGCTGCGCACCAACGTGTTCCCCCTGCTGTGTGG
CCTGGTAGCCGGTTCGTTCGCGGCCGTCGTGTCGGCGGTGGGCATCGCCTACGCACTCGGCGCGACGCCTGACGTGATTC
GATCGCTTGCGCCGAAATCGGTGACCATCCCGATTGCGATGGGGGTATCGGAAAAGATCGGTGGCCTGCCCTCGCTGACT
GCGGTGCTGGTCATGGCAACCGGCATCATCGGCGCCGTCACCGCCACCGGCCTGCTTAACCTGCTGCGCGTGCGGGACTA
CACGGTGCGCGGCTTCGCCACGGGCGTGGCCGCGCACGGCATCGGCACGGCACGGGCATTCCAGGTCAGCCAGGAAGCCG
GGGCCTTCTCGGCACTCGGGATGGGGCTGAATGGCGTACTGACGGCCATCATGGTGCCGGTGCTGGCGGCCTGGATGCCG
CATTGA

Upstream 100 bases:

>100_bases
GGGTGGCCATCGCGGTCACGGCGCTGGTCACGCGCGCGCTGATGCGCAAGCCTCCTGCCGACACTCCTGTCGACACGTCG
GCGGACACGGGAGCACAGCC

Downstream 100 bases:

>100_bases
CACCCCTGACACGCTCCTGACAGTACGCTGTCAGGAGCCCGCGCGCATGATCCGTTCTCCCAACTTCGTAACGAGGAGAG
CCAAGATGTCCACCCCCAAC

Product: effector of murein hydrolase LrgB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MMSPRLNEIWVYLAASPLIGLTATLIAYVFAFRIYERARFSPLANPVMISVAILVTVLTVTGTPYKTYFDGAQFVHFLLG
PATVALAVPLYTQLPKLRTNVFPLLCGLVAGSFAAVVSAVGIAYALGATPDVIRSLAPKSVTIPIAMGVSEKIGGLPSLT
AVLVMATGIIGAVTATGLLNLLRVRDYTVRGFATGVAAHGIGTARAFQVSQEAGAFSALGMGLNGVLTAIMVPVLAAWMP
H

Sequences:

>Translated_241_residues
MMSPRLNEIWVYLAASPLIGLTATLIAYVFAFRIYERARFSPLANPVMISVAILVTVLTVTGTPYKTYFDGAQFVHFLLG
PATVALAVPLYTQLPKLRTNVFPLLCGLVAGSFAAVVSAVGIAYALGATPDVIRSLAPKSVTIPIAMGVSEKIGGLPSLT
AVLVMATGIIGAVTATGLLNLLRVRDYTVRGFATGVAAHGIGTARAFQVSQEAGAFSALGMGLNGVLTAIMVPVLAAWMP
H
>Mature_241_residues
MMSPRLNEIWVYLAASPLIGLTATLIAYVFAFRIYERARFSPLANPVMISVAILVTVLTVTGTPYKTYFDGAQFVHFLLG
PATVALAVPLYTQLPKLRTNVFPLLCGLVAGSFAAVVSAVGIAYALGATPDVIRSLAPKSVTIPIAMGVSEKIGGLPSLT
AVLVMATGIIGAVTATGLLNLLRVRDYTVRGFATGVAAHGIGTARAFQVSQEAGAFSALGMGLNGVLTAIMVPVLAAWMP
H

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=212, Percent_Identity=41.0377358490566, Blast_Score=165, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 25104; Mature: 25104

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure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C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]