| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is pabB [H]
Identifier: 94311852
GI number: 94311852
Start: 3173288
End: 3175201
Strand: Reverse
Name: pabB [H]
Synonym: Rmet_2920
Alternate gene names: 94311852
Gene position: 3175201-3173288 (Counterclockwise)
Preceding gene: 94311853
Following gene: 94311843
Centisome position: 80.83
GC content: 66.35
Gene sequence:
>1914_bases ATGCCCAACGCAGCGATAATGCCGACTGCAGCGTTTTCGCATCCAGTCTTCGTGGTACCCATCCCTTCGCCCCCCTTCGT TCTGCTCGACGACGCCACAGCCGGCTCTGGCGTGACGGCTTCGCGCCTCTATACCGATTTCGTCCGGGAGGACGTGCTGG CGGCCGGTGCCGACGTATCGGCGCTTGACACGCTGCTGGCCAGCGGTTGGCGGGACGGGTTGCACGCCACGTTCTTTGCG CCCTACGAATTCGGTGGTGCGATCGTTGGCGCACCCGTGCACGTTGGCGATGCGCTGCCGTTTCACGACGGCGCCCTGCG CGTGCTGTGGTTTCGCACGTTGCGCCGGCTCGATACGGAAGGTGTGGCGCAGTGGCTAGCCGCAGGCGCACAACCAGGCC CGACGGGCGCGCTCGACGTGACGGCCAGCACCACGCGGACGCAATACACCGAAGCGATCGCGCGTATCCACGATTACATC GAGGCGGGCGATACCTATCAGGTTAACTTCACGCAACGACTACGCTGTCGCGTGTTTGGCGATCCGATGGCGTTCTATGC GGCGTTGCGCGCGGCACAGCCGGTGCCGTTCGGCGTGCTTGCGCATCTGCCCGGTGGCGGTTGGGTGCTGTCGCTATCGC CCGAACTGTTCGTCGAGCACGATGGCCACGGACATCTCGTCGCACGTCCAATGAAGGGCACCGCGCCGCGCTCAGGGGAT GCCGAACAGGATGCGCGCGCCGCGAAACGACTGGCCACCGATGCCAAGAACCGCGCCGAGAACGTGATGATCGTCGACCT GCTGCGCAACGACCTCGGTCGCGTGGCGATCCCCGGGAGCGTGGCGGTGCCCGAGCGCTTCGTCGTCGAACCGTTCGGTC GCGTGTTGCAAATGACGTCGACAGTCACCGCGACCGCGCGCCCGGGTACGTCGTTCGGTGCGTTGATGGCCGCGCTGTTC CCGTGCGGCTCGATTACCGGCGCGCCCAAGCGGCGCACGATGCAGATCATCGCCGAGCTCGAGACGTCGCCACGTGGGTT GTACACGGGCGCGATCGGTTGGCTCGATGCGACATCGCATAAGACTACGGAGGTCATAGGCGTCGGCGCCTTCGGCATGT CTGTGGCAATCCGCACGCTGGTGCTGGCGCCGCCCGGGGCCGATGGCCTGCGCGCGGCCGAGATGGGCGTGGGCGGTGGC ATCGTGCACGACAGCGTGGCCGACGATGAGTACGCCGAATGCGGATGGAAAGCGCGGTTCCTGATCGGTCATGACCCCGG CTTCACGTTGTTCGAGACCATGCATGCGCGCGATGGCGCAGTGCTACATCGCGAGCGCCATTTGCAGCGACTAGCGAACT CGTCGGCGGCGTTCGGCTTCGCGCTGGACTTGCCTGAAGCCCGCGCGGCGGTGCAGGCTGAAGCCGCGCGACTGGGCGAT GGCGACTGGCGCCTGCGCGTGAGTGTGGACAAGCGCGGCACGCTGGTATTTGCCAGCGGGGCATTGGCTCCGCTCGCGCA TGGCGTCGTGGGGCTCGAGATCGCACCGACATGCCTGCCCGTTCACGATCCGCTGCGCCGGCACAAGCTCAGCGCGCGCG CCGTGTTCGATCAGGGATGGCAGGCCGCGGAGCGGGCAGGCGGGTTCGATAGCCTGTTCTTCAACACGTGCGACGAACTG CTCGAAGGCGGCCGCAGTTCGGTGTTCATCAAGGTAGATGGTCATTGGATGACACCGCCACTCTCGGCGGACATCCTGCC GGGCGTGATGCGTGCCGTGGTGCTCGAAGAAGGGGACGCATTGATCGACGGACCGGTGCAGGAAGCCACCGTGACGCGTG ACATGGTGCAACGCGCCGAAGCCATCGTTATCGCCAACGCATTGCGCGGCACGCTGCGCGCGCGCCTGATCTGA
Upstream 100 bases:
>100_bases CCTGGCTCGACAAGGTGAAGAGCTTCTTTAGCTGATCGCCTTATCGACTCGTCGACAGGACGATGAAACCGGCCACGTGT CCAGCGTGGCCGGTTTTTTT
Downstream 100 bases:
>100_bases GCAACGTGTCTAGGGTGTCTGCCGCAGCGACTACTTGTGTCGCGTATCAAGCCGGCCTTCGCCGAGCTTCCAGCGCACCA CGCCGGGCAGGTTGATCAGC
Product: Anthranilate/para-aminobenzoate synthase component I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MPNAAIMPTAAFSHPVFVVPIPSPPFVLLDDATAGSGVTASRLYTDFVREDVLAAGADVSALDTLLASGWRDGLHATFFA PYEFGGAIVGAPVHVGDALPFHDGALRVLWFRTLRRLDTEGVAQWLAAGAQPGPTGALDVTASTTRTQYTEAIARIHDYI EAGDTYQVNFTQRLRCRVFGDPMAFYAALRAAQPVPFGVLAHLPGGGWVLSLSPELFVEHDGHGHLVARPMKGTAPRSGD AEQDARAAKRLATDAKNRAENVMIVDLLRNDLGRVAIPGSVAVPERFVVEPFGRVLQMTSTVTATARPGTSFGALMAALF PCGSITGAPKRRTMQIIAELETSPRGLYTGAIGWLDATSHKTTEVIGVGAFGMSVAIRTLVLAPPGADGLRAAEMGVGGG IVHDSVADDEYAECGWKARFLIGHDPGFTLFETMHARDGAVLHRERHLQRLANSSAAFGFALDLPEARAAVQAEAARLGD GDWRLRVSVDKRGTLVFASGALAPLAHGVVGLEIAPTCLPVHDPLRRHKLSARAVFDQGWQAAERAGGFDSLFFNTCDEL LEGGRSSVFIKVDGHWMTPPLSADILPGVMRAVVLEEGDALIDGPVQEATVTRDMVQRAEAIVIANALRGTLRARLI
Sequences:
>Translated_637_residues MPNAAIMPTAAFSHPVFVVPIPSPPFVLLDDATAGSGVTASRLYTDFVREDVLAAGADVSALDTLLASGWRDGLHATFFA PYEFGGAIVGAPVHVGDALPFHDGALRVLWFRTLRRLDTEGVAQWLAAGAQPGPTGALDVTASTTRTQYTEAIARIHDYI EAGDTYQVNFTQRLRCRVFGDPMAFYAALRAAQPVPFGVLAHLPGGGWVLSLSPELFVEHDGHGHLVARPMKGTAPRSGD AEQDARAAKRLATDAKNRAENVMIVDLLRNDLGRVAIPGSVAVPERFVVEPFGRVLQMTSTVTATARPGTSFGALMAALF PCGSITGAPKRRTMQIIAELETSPRGLYTGAIGWLDATSHKTTEVIGVGAFGMSVAIRTLVLAPPGADGLRAAEMGVGGG IVHDSVADDEYAECGWKARFLIGHDPGFTLFETMHARDGAVLHRERHLQRLANSSAAFGFALDLPEARAAVQAEAARLGD GDWRLRVSVDKRGTLVFASGALAPLAHGVVGLEIAPTCLPVHDPLRRHKLSARAVFDQGWQAAERAGGFDSLFFNTCDEL LEGGRSSVFIKVDGHWMTPPLSADILPGVMRAVVLEEGDALIDGPVQEATVTRDMVQRAEAIVIANALRGTLRARLI >Mature_636_residues PNAAIMPTAAFSHPVFVVPIPSPPFVLLDDATAGSGVTASRLYTDFVREDVLAAGADVSALDTLLASGWRDGLHATFFAP YEFGGAIVGAPVHVGDALPFHDGALRVLWFRTLRRLDTEGVAQWLAAGAQPGPTGALDVTASTTRTQYTEAIARIHDYIE AGDTYQVNFTQRLRCRVFGDPMAFYAALRAAQPVPFGVLAHLPGGGWVLSLSPELFVEHDGHGHLVARPMKGTAPRSGDA EQDARAAKRLATDAKNRAENVMIVDLLRNDLGRVAIPGSVAVPERFVVEPFGRVLQMTSTVTATARPGTSFGALMAALFP CGSITGAPKRRTMQIIAELETSPRGLYTGAIGWLDATSHKTTEVIGVGAFGMSVAIRTLVLAPPGADGLRAAEMGVGGGI VHDSVADDEYAECGWKARFLIGHDPGFTLFETMHARDGAVLHRERHLQRLANSSAAFGFALDLPEARAAVQAEAARLGDG DWRLRVSVDKRGTLVFASGALAPLAHGVVGLEIAPTCLPVHDPLRRHKLSARAVFDQGWQAAERAGGFDSLFFNTCDELL EGGRSSVFIKVDGHWMTPPLSADILPGVMRAVVLEEGDALIDGPVQEATVTRDMVQRAEAIVIANALRGTLRARLI
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=292, Percent_Identity=42.8082191780822, Blast_Score=202, Evalue=6e-53, Organism=Escherichia coli, GI1787518, Length=308, Percent_Identity=29.5454545454545, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1786809, Length=169, Percent_Identity=27.810650887574, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=271, Percent_Identity=33.210332103321, Blast_Score=140, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6324361, Length=295, Percent_Identity=28.4745762711864, Blast_Score=91, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 67781; Mature: 67650
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNAAIMPTAAFSHPVFVVPIPSPPFVLLDDATAGSGVTASRLYTDFVREDVLAAGADVS CCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHH ALDTLLASGWRDGLHATFFAPYEFGGAIVGAPVHVGDALPFHDGALRVLWFRTLRRLDTE HHHHHHHHCCCCCCCEEEECCHHCCCEEEECCEECCCCCCCCCCHHHHHHHHHHHHCCHH GVAQWLAAGAQPGPTGALDVTASTTRTQYTEAIARIHDYIEAGDTYQVNFTQRLRCRVFG HHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEHHEEEEEEEEC DPMAFYAALRAAQPVPFGVLAHLPGGGWVLSLSPELFVEHDGHGHLVARPMKGTAPRSGD CHHHHHHHHHHCCCCCCHHEEECCCCCEEEEECCEEEEEECCCCCEEEECCCCCCCCCCC AEQDARAAKRLATDAKNRAENVMIVDLLRNDLGRVAIPGSVAVPERFVVEPFGRVLQMTS CHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHH TVTATARPGTSFGALMAALFPCGSITGAPKRRTMQIIAELETSPRGLYTGAIGWLDATSH HEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCEEEEECCCC KTTEVIGVGAFGMSVAIRTLVLAPPGADGLRAAEMGVGGGIVHDSVADDEYAECGWKARF CCEEEEEECHHHHHHHHHEEEECCCCCCCCCHHHCCCCCCEECCCCCCCHHHHCCCEEEE LIGHDPGFTLFETMHARDGAVLHRERHLQRLANSSAAFGFALDLPEARAAVQAEAARLGD EEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCC GDWRLRVSVDKRGTLVFASGALAPLAHGVVGLEIAPTCLPVHDPLRRHKLSARAVFDQGW CCEEEEEEECCCCEEEEECCCHHHHHCCEEEEEECCCEECCCCHHHHHHHHHHHHHHCCH QAAERAGGFDSLFFNTCDELLEGGRSSVFIKVDGHWMTPPLSADILPGVMRAVVLEEGDA HHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHCCCC LIDGPVQEATVTRDMVQRAEAIVIANALRGTLRARLI EECCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCC >Mature Secondary Structure PNAAIMPTAAFSHPVFVVPIPSPPFVLLDDATAGSGVTASRLYTDFVREDVLAAGADVS CCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCHH ALDTLLASGWRDGLHATFFAPYEFGGAIVGAPVHVGDALPFHDGALRVLWFRTLRRLDTE HHHHHHHHCCCCCCCEEEECCHHCCCEEEECCEECCCCCCCCCCHHHHHHHHHHHHCCHH GVAQWLAAGAQPGPTGALDVTASTTRTQYTEAIARIHDYIEAGDTYQVNFTQRLRCRVFG HHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEHHEEEEEEEEC DPMAFYAALRAAQPVPFGVLAHLPGGGWVLSLSPELFVEHDGHGHLVARPMKGTAPRSGD CHHHHHHHHHHCCCCCCHHEEECCCCCEEEEECCEEEEEECCCCCEEEECCCCCCCCCCC AEQDARAAKRLATDAKNRAENVMIVDLLRNDLGRVAIPGSVAVPERFVVEPFGRVLQMTS CHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHH TVTATARPGTSFGALMAALFPCGSITGAPKRRTMQIIAELETSPRGLYTGAIGWLDATSH HEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCEEEEECCCC KTTEVIGVGAFGMSVAIRTLVLAPPGADGLRAAEMGVGGGIVHDSVADDEYAECGWKARF CCEEEEEECHHHHHHHHHEEEECCCCCCCCCHHHCCCCCCEECCCCCCCHHHHCCCEEEE LIGHDPGFTLFETMHARDGAVLHRERHLQRLANSSAAFGFALDLPEARAAVQAEAARLGD EEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCC GDWRLRVSVDKRGTLVFASGALAPLAHGVVGLEIAPTCLPVHDPLRRHKLSARAVFDQGW CCEEEEEEECCCCEEEEECCCHHHHHCCEEEEEECCCEECCCCHHHHHHHHHHHHHHCCH QAAERAGGFDSLFFNTCDELLEGGRSSVFIKVDGHWMTPPLSADILPGVMRAVVLEEGDA HHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHCCCC LIDGPVQEATVTRDMVQRAEAIVIANALRGTLRARLI EECCCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6330050; 9097040; 9278503; 7896119; 2251281; 7592344 [H]