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The map label for this gene is matR [H]

Identifier: 94311730

GI number: 94311730

Start: 3045520

End: 3046221

Strand: Reverse

Name: matR [H]

Synonym: Rmet_2798

Alternate gene names: 94311730

Gene position: 3046221-3045520 (Counterclockwise)

Preceding gene: 94311731

Following gene: 94311729

Centisome position: 77.55

GC content: 66.24

Gene sequence:

>702_bases
ATGCGGATCGTCCAGCAGGCGCTTTACCTCGAAGTTGCCGATCGGCTGCGTGCCATGATCGACGATCACACGCTGTTGCC
AGGCGCGTGGATCGACGAAGTCGCGCTTGCGGCCGCACTGGGCACGTCGCGCACGCCAATGCGCGAGGCGCTGAAGGTCC
TGGCCGCGGAAGGGCTGGTGCGGCTGGAGCCGCGTCGCGGATGTTTCGTCAATGCACTCACCGAGCAGGATCTCGACGAA
ATCTTTCCGCTGATGGCCCTGCTCGAAGGGCGCTGCGCCTACGAGGCCGCGCGCAACGTCACCCAGACCGATCTCGATGC
GCTCGAAGGCTTGCATGCCGAGCTGGCCCGTCATGCGGCGGCGGGCGATATCGACGCCTACTACGAGACCAACTACCAGA
TTCATGAGGCGATCCAGCGGCTGGCCGGCAACCGCTGGCTGTCGGGCGTGGTCAGTGACTTGCGCAAGGTGCTGCGCCTG
TCGCGGCACAAGAGCCTGAAGCTGCCGGGCCGCATTCAGGAATCGTGTGCCGAGCACATGTCGGTGTTCTCGGCGCTGAA
GGCACACGATCCGGAAGGCGCGGAAGCGCTAATGAAAACCCACGTGCTGCGCCAGCGCGGCGCGTTGAGCGCGCTGGATC
GTGCCGATCCGGAGCCGCCCGCCGTAGCGCCGGGCCAGCTTCGCCTGGCTGGACAGGACTGA

Upstream 100 bases:

>100_bases
CTTTGCAGCATCGAAACTCCTTGCGGCGCGCGCGCCCTTATTCATAATTATGAATTATTGCGGTGTATGCGCCGCTCGGT
GATGTCATCGAAAGGGCTTC

Downstream 100 bases:

>100_bases
AGGTTTGTGATCGATCCGCTCGCCCCTACGCAGGAATCTCCATGACCGCCCTCGACACCTCAGATCAACAGAAAGTCAGC
GCGCCGCTCGATGCCGCCGA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRIVQQALYLEVADRLRAMIDDHTLLPGAWIDEVALAAALGTSRTPMREALKVLAAEGLVRLEPRRGCFVNALTEQDLDE
IFPLMALLEGRCAYEAARNVTQTDLDALEGLHAELARHAAAGDIDAYYETNYQIHEAIQRLAGNRWLSGVVSDLRKVLRL
SRHKSLKLPGRIQESCAEHMSVFSALKAHDPEGAEALMKTHVLRQRGALSALDRADPEPPAVAPGQLRLAGQD

Sequences:

>Translated_233_residues
MRIVQQALYLEVADRLRAMIDDHTLLPGAWIDEVALAAALGTSRTPMREALKVLAAEGLVRLEPRRGCFVNALTEQDLDE
IFPLMALLEGRCAYEAARNVTQTDLDALEGLHAELARHAAAGDIDAYYETNYQIHEAIQRLAGNRWLSGVVSDLRKVLRL
SRHKSLKLPGRIQESCAEHMSVFSALKAHDPEGAEALMKTHVLRQRGALSALDRADPEPPAVAPGQLRLAGQD
>Mature_233_residues
MRIVQQALYLEVADRLRAMIDDHTLLPGAWIDEVALAAALGTSRTPMREALKVLAAEGLVRLEPRRGCFVNALTEQDLDE
IFPLMALLEGRCAYEAARNVTQTDLDALEGLHAELARHAAAGDIDAYYETNYQIHEAIQRLAGNRWLSGVVSDLRKVLRL
SRHKSLKLPGRIQESCAEHMSVFSALKAHDPEGAEALMKTHVLRQRGALSALDRADPEPPAVAPGQLRLAGQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=183, Percent_Identity=25.6830601092896, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000485
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25642; Mature: 25642

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVQQALYLEVADRLRAMIDDHTLLPGAWIDEVALAAALGTSRTPMREALKVLAAEGLV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCE
RLEPRRGCFVNALTEQDLDEIFPLMALLEGRCAYEAARNVTQTDLDALEGLHAELARHAA
EECCCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AGDIDAYYETNYQIHEAIQRLAGNRWLSGVVSDLRKVLRLSRHKSLKLPGRIQESCAEHM
CCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SVFSALKAHDPEGAEALMKTHVLRQRGALSALDRADPEPPAVAPGQLRLAGQD
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MRIVQQALYLEVADRLRAMIDDHTLLPGAWIDEVALAAALGTSRTPMREALKVLAAEGLV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCE
RLEPRRGCFVNALTEQDLDEIFPLMALLEGRCAYEAARNVTQTDLDALEGLHAELARHAA
EECCCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AGDIDAYYETNYQIHEAIQRLAGNRWLSGVVSDLRKVLRLSRHKSLKLPGRIQESCAEHM
CCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SVFSALKAHDPEGAEALMKTHVLRQRGALSALDRADPEPPAVAPGQLRLAGQD
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]