| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is 94311702
Identifier: 94311702
GI number: 94311702
Start: 3013309
End: 3013911
Strand: Reverse
Name: 94311702
Synonym: Rmet_2770
Alternate gene names: NA
Gene position: 3013911-3013309 (Counterclockwise)
Preceding gene: 94311703
Following gene: 94311699
Centisome position: 76.73
GC content: 63.35
Gene sequence:
>603_bases ATGACATCCATGAAACTCCGACTCACTGACGCGTCACGCCGACGCCTTGCCGCCATGGGACTGATAGCCAGCCTGCTTGC CCTGTTTGGTTGCGACCAGCAGAAGGTCGACGAAGCCATGAAGAAGGCCGGCGACGCCGCGCGCGGCACGTGGAACAGCG TGAAGCCCGACAGCCTGCTGTTCAAGGGCATCGAGATCGGCAAGTCCACCGAGGAAGATGTGCGCCGTCAGGCCGGCAAG CCCGAGATCGTGTGGGAAGAGGCAGACGGCGGACGCCGGCTGGAGTACCCGCGTGGCCCGGAAGGCACCACCACCTGGAT GGTGACGACGGGCCCGGACGGTACCGTGCGCAAGATCGAACAGGTGCTGTCCGCCGAGTCGTTCTCGCAGGTGCGGCCCG GCATGAACAAGGACCAGATCCGACGGATGCTCGGCAAGCCGACCAAGGTCGAGGCGTTCGCGCTGAAGCAGGAAGAGGTG TGGGGATACCGCTGGTATGAGAACCCGACCGAACGCGCGTTCTTCAACGTCCACTTCAACAACGACGGCATCGTTACCAC GACGTCGCGAAGTGACGATCCTTCGAAGATGGGTGGCGGCTAA
Upstream 100 bases:
>100_bases AGGCAGCATCGGCGGCAGCCGCATCGGCCGCGGCGGCCGCCGCAGCCTCAGCTCCCGATACGGGCAAGCCCGCCGAAGCC CAGGACGACGCTACCCAGCA
Downstream 100 bases:
>100_bases CCAGGTCTGAGGGGGGAGGTGGTGCCGGCGATCGGGGAGACCGCCGGCACGCGGGCCGGGAGGCGGCTACCGGTTAGCGG ATACGCATGCCGGGCACGGC
Product: putative lipoprotein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTSMKLRLTDASRRRLAAMGLIASLLALFGCDQQKVDEAMKKAGDAARGTWNSVKPDSLLFKGIEIGKSTEEDVRRQAGK PEIVWEEADGGRRLEYPRGPEGTTTWMVTTGPDGTVRKIEQVLSAESFSQVRPGMNKDQIRRMLGKPTKVEAFALKQEEV WGYRWYENPTERAFFNVHFNNDGIVTTTSRSDDPSKMGGG
Sequences:
>Translated_200_residues MTSMKLRLTDASRRRLAAMGLIASLLALFGCDQQKVDEAMKKAGDAARGTWNSVKPDSLLFKGIEIGKSTEEDVRRQAGK PEIVWEEADGGRRLEYPRGPEGTTTWMVTTGPDGTVRKIEQVLSAESFSQVRPGMNKDQIRRMLGKPTKVEAFALKQEEV WGYRWYENPTERAFFNVHFNNDGIVTTTSRSDDPSKMGGG >Mature_199_residues TSMKLRLTDASRRRLAAMGLIASLLALFGCDQQKVDEAMKKAGDAARGTWNSVKPDSLLFKGIEIGKSTEEDVRRQAGKP EIVWEEADGGRRLEYPRGPEGTTTWMVTTGPDGTVRKIEQVLSAESFSQVRPGMNKDQIRRMLGKPTKVEAFALKQEEVW GYRWYENPTERAFFNVHFNNDGIVTTTSRSDDPSKMGGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22333; Mature: 22201
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMKLRLTDASRRRLAAMGLIASLLALFGCDQQKVDEAMKKAGDAARGTWNSVKPDSLL CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHH FKGIEIGKSTEEDVRRQAGKPEIVWEEADGGRRLEYPRGPEGTTTWMVTTGPDGTVRKIE HHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH QVLSAESFSQVRPGMNKDQIRRMLGKPTKVEAFALKQEEVWGYRWYENPTERAFFNVHFN HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECHHHHCCEECCCCCCCCEEEEEEEC NDGIVTTTSRSDDPSKMGGG CCCEEEECCCCCCCCCCCCC >Mature Secondary Structure TSMKLRLTDASRRRLAAMGLIASLLALFGCDQQKVDEAMKKAGDAARGTWNSVKPDSLL CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHH FKGIEIGKSTEEDVRRQAGKPEIVWEEADGGRRLEYPRGPEGTTTWMVTTGPDGTVRKIE HHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH QVLSAESFSQVRPGMNKDQIRRMLGKPTKVEAFALKQEEVWGYRWYENPTERAFFNVHFN HHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECHHHHCCEECCCCCCCCEEEEEEEC NDGIVTTTSRSDDPSKMGGG CCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA