Click here to switch to the map view.

The map label for this gene is wbbL [H]

Identifier: 94311661

GI number: 94311661

Start: 2965018

End: 2965914

Strand: Reverse

Name: wbbL [H]

Synonym: Rmet_2729

Alternate gene names: 94311661

Gene position: 2965914-2965018 (Counterclockwise)

Preceding gene: 335055627

Following gene: 94311660

Centisome position: 75.51

GC content: 56.08

Gene sequence:

>897_bases
TTGCTGGATGCAATGATGAGCCTGCGTCAGTTCGCTGCGAATTCGATTGCGTCAGTAGCCATTGTTGATAATGCGTCCGT
AGACGACTCGTTGGACCTTGTGGCCGAGCGCGATGACTGGGGTTTCCCGGTCCACCTGATTCGTAATGCCGAGAATAGGG
GGTTCGGCGCAGCGTGTAATCAGGGGGCAGGAGTGGGGCGCGCAGAATTCGTGCTTCTGCTGAATCCGGATACCCGAGTT
TATGAGAATTCCCTATCGATACCACTGGCGTTCATGCAACGATCGGAGAACGCGGCTGTGTCAGTGACTGGCATTCAGCT
GATCGACGAAACCGGCCATGTTCAACGTGCTTGTGCACGTTTCCCTTCCCCAGCAATGTTCTCTGCTGCCGCATTTGGCC
TGGATAGGCTTCCGTGGCTGCGTGGCCAGAGGCTTCATATGAGCGACTGGGATCATGCGTCGACTCGCGATGTTGACCAT
GTGATTGGCGCTTTCTATCTGATTCGCCGCAGCGTCTTTGAGAGGCTTGGTGGTTTCGACGAGAGATTCTTCGTCTATCT
GGAGGATCTGGATCTTTCCCTACGCGTAAAGCAGGCTGGCGGCCGGATCGTATTTTTGGCCGACGCACAGGCGTTTCACG
CGGGAGGTGGTACGTCGCGGCAGATCAAGGCGACTCGGCTTTTCTATTCGCTGCGCAGTAGACTGCTATACGGATTCAAG
CATTTTTCGCGTGTTGCGGCTTGGGCCCTCCTTGTGGTGACGATTCTGCCAGAACCGATAACACGCACGGTATTCTCCGC
CGCGCGTGGCGGCATGCAAGATGTTGGTAATACGCTGCGTGGCTACGGCATGTTGCTCCGTTCGCTTCCTCAGATCTTGA
GGGCATCGAGGCGGTGA

Upstream 100 bases:

>100_bases
GCGGTGTGCTAAACTTCTATGCTATGATGGTCTACGATCCATTATTGCAGGGATGAATAATATTGATATTGTTATCGTGA
ACTGGTCTTCGGGACGTCAG

Downstream 100 bases:

>100_bases
GCAGGTTTGCTCATCTCTGACATGCAAGCCAAAAAGGTGTTTTTATGCTAATGCTTGCGGCACTTTCTGCCAGAATCGCA
GATCTCGAATTGGTATGAGA

Product: glycosyl transferase, family 2

Products: NA

Alternate protein names: Rhamnosyltransferase [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MLDAMMSLRQFAANSIASVAIVDNASVDDSLDLVAERDDWGFPVHLIRNAENRGFGAACNQGAGVGRAEFVLLLNPDTRV
YENSLSIPLAFMQRSENAAVSVTGIQLIDETGHVQRACARFPSPAMFSAAAFGLDRLPWLRGQRLHMSDWDHASTRDVDH
VIGAFYLIRRSVFERLGGFDERFFVYLEDLDLSLRVKQAGGRIVFLADAQAFHAGGGTSRQIKATRLFYSLRSRLLYGFK
HFSRVAAWALLVVTILPEPITRTVFSAARGGMQDVGNTLRGYGMLLRSLPQILRASRR

Sequences:

>Translated_298_residues
MLDAMMSLRQFAANSIASVAIVDNASVDDSLDLVAERDDWGFPVHLIRNAENRGFGAACNQGAGVGRAEFVLLLNPDTRV
YENSLSIPLAFMQRSENAAVSVTGIQLIDETGHVQRACARFPSPAMFSAAAFGLDRLPWLRGQRLHMSDWDHASTRDVDH
VIGAFYLIRRSVFERLGGFDERFFVYLEDLDLSLRVKQAGGRIVFLADAQAFHAGGGTSRQIKATRLFYSLRSRLLYGFK
HFSRVAAWALLVVTILPEPITRTVFSAARGGMQDVGNTLRGYGMLLRSLPQILRASRR
>Mature_298_residues
MLDAMMSLRQFAANSIASVAIVDNASVDDSLDLVAERDDWGFPVHLIRNAENRGFGAACNQGAGVGRAEFVLLLNPDTRV
YENSLSIPLAFMQRSENAAVSVTGIQLIDETGHVQRACARFPSPAMFSAAAFGLDRLPWLRGQRLHMSDWDHASTRDVDH
VIGAFYLIRRSVFERLGGFDERFFVYLEDLDLSLRVKQAGGRIVFLADAQAFHAGGGTSRQIKATRLFYSLRSRLLYGFK
HFSRVAAWALLVVTILPEPITRTVFSAARGGMQDVGNTLRGYGMLLRSLPQILRASRR

Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 33052; Mature: 33052

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAMMSLRQFAANSIASVAIVDNASVDDSLDLVAERDDWGFPVHLIRNAENRGFGAACN
CCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHEECCCCCCCCEEEEECCCCCCCCCCCC
QGAGVGRAEFVLLLNPDTRVYENSLSIPLAFMQRSENAAVSVTGIQLIDETGHVQRACAR
CCCCCCCEEEEEEECCCCCEECCCCCCHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHH
FPSPAMFSAAAFGLDRLPWLRGQRLHMSDWDHASTRDVDHVIGAFYLIRRSVFERLGGFD
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
ERFFVYLEDLDLSLRVKQAGGRIVFLADAQAFHAGGGTSRQIKATRLFYSLRSRLLYGFK
CEEEEEEECCCEEEEEECCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
HFSRVAAWALLVVTILPEPITRTVFSAARGGMQDVGNTLRGYGMLLRSLPQILRASRR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDAMMSLRQFAANSIASVAIVDNASVDDSLDLVAERDDWGFPVHLIRNAENRGFGAACN
CCHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHEECCCCCCCCEEEEECCCCCCCCCCCC
QGAGVGRAEFVLLLNPDTRVYENSLSIPLAFMQRSENAAVSVTGIQLIDETGHVQRACAR
CCCCCCCEEEEEEECCCCCEECCCCCCHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHH
FPSPAMFSAAAFGLDRLPWLRGQRLHMSDWDHASTRDVDHVIGAFYLIRRSVFERLGGFD
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
ERFFVYLEDLDLSLRVKQAGGRIVFLADAQAFHAGGGTSRQIKATRLFYSLRSRLLYGFK
CEEEEEEECCCEEEEEECCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
HFSRVAAWALLVVTILPEPITRTVFSAARGGMQDVGNTLRGYGMLLRSLPQILRASRR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]