| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is thrB
Identifier: 94311563
GI number: 94311563
Start: 2860222
End: 2861208
Strand: Direct
Name: thrB
Synonym: Rmet_2627
Alternate gene names: 94311563
Gene position: 2860222-2861208 (Clockwise)
Preceding gene: 94311562
Following gene: 94311564
Centisome position: 72.81
GC content: 64.34
Gene sequence:
>987_bases ATGGCCGTTTTCACCACGGTCTCGCAGGACGAGATCGCCCGCTGGCTGCTTGACTATGACCTTGGCGAAGTGCGCGCGCT GCGCGGCATTGCCTCGGGCATCGAGAACAGCAACTTTTTCCTGACCATGGAGCAGGATGGCGTCACACGTGAGTACGTAC TGACGATCTTTGAACGGCTGCAATTCGACCAGCTGCCGTATTACCTGCACCTGATGGACCATCTGGCACGACACGGCATC TGCGTGCCGGCGCCGATGCCAGCCCGCGACGGCGAGATCCTGCGCGAACTGAAGGGCAAGCCGGCGACCATCGTCACGCG CCTGCCCGGCGCCTCGCAACTTGCGCCGCAGCCCGACCATTGCGCCGAAGTCGGTGCAATGCTGGCGCGCATGCATATCG CCGGCCAGGACTATCCACGCAAGCAGCCGAATCTGCGCAGCCTGGCATGGTGGCAGCAAACCACCCCGGAAATCACACCT TTCCTCGATGCCGCGCAGCGCAAGCTGCTGACCGAGGAAATCGCGCACCAGACCGCGTTTTTCGGCAGCGGTGACTACGC CGCGCTGCAGGGTGGCCCTTGCCACTGCGACCTGTTCCGCGACAACGCGCTGTTCGACACTGACAGCGCCGGCAACCACC GGCTCGGCGGCTTCTTCGATTTCTACTTTGCCGGCGACGACAAATGGCTGTTCGACCTGGCCGTCACCGTCAACGACTGG TGCATCGACCTCGCGACCGGCACCATCGACATGGAACGTGCGCAGGCCATGCTGCGGGCTTATCATGCGGTCAGGCCCCT GACGGCAGTGGAGGCGGCGCACTGGCAAGATATGCTGCGCGCTGGCGCACTGCGCTTCTGGGTATCGCGCCTGTGGGATT TCTACCTGCCGCGCGAGGCCGATATGCTCCAGCCGCACGATCCGACCCACTTCGAACGCATCCTGCGCCGCCGCATCGAC GACGCCGCAGCGCTCCCCTGGATCTGA
Upstream 100 bases:
>100_bases GAAGGTCGCGCCGGCCCTCCGGCAGTGATGCCGCGGCGGCGAACCGCCATTGCCATCCGCCCTCGGTTCGTCGCGTCCCG AATTGCACCAACAGAACAGT
Downstream 100 bases:
>100_bases TTCGCCATGCAACTACTGGAAGTTTCCGCCAAGGAAGGCTACGTCTGGTTCCGCCAGGGCATCTGGCTGTTCCGCAAGAA CCCGCTGGCATTCCTGATGC
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MAVFTTVSQDEIARWLLDYDLGEVRALRGIASGIENSNFFLTMEQDGVTREYVLTIFERLQFDQLPYYLHLMDHLARHGI CVPAPMPARDGEILRELKGKPATIVTRLPGASQLAPQPDHCAEVGAMLARMHIAGQDYPRKQPNLRSLAWWQQTTPEITP FLDAAQRKLLTEEIAHQTAFFGSGDYAALQGGPCHCDLFRDNALFDTDSAGNHRLGGFFDFYFAGDDKWLFDLAVTVNDW CIDLATGTIDMERAQAMLRAYHAVRPLTAVEAAHWQDMLRAGALRFWVSRLWDFYLPREADMLQPHDPTHFERILRRRID DAAALPWI
Sequences:
>Translated_328_residues MAVFTTVSQDEIARWLLDYDLGEVRALRGIASGIENSNFFLTMEQDGVTREYVLTIFERLQFDQLPYYLHLMDHLARHGI CVPAPMPARDGEILRELKGKPATIVTRLPGASQLAPQPDHCAEVGAMLARMHIAGQDYPRKQPNLRSLAWWQQTTPEITP FLDAAQRKLLTEEIAHQTAFFGSGDYAALQGGPCHCDLFRDNALFDTDSAGNHRLGGFFDFYFAGDDKWLFDLAVTVNDW CIDLATGTIDMERAQAMLRAYHAVRPLTAVEAAHWQDMLRAGALRFWVSRLWDFYLPREADMLQPHDPTHFERILRRRID DAAALPWI >Mature_327_residues AVFTTVSQDEIARWLLDYDLGEVRALRGIASGIENSNFFLTMEQDGVTREYVLTIFERLQFDQLPYYLHLMDHLARHGIC VPAPMPARDGEILRELKGKPATIVTRLPGASQLAPQPDHCAEVGAMLARMHIAGQDYPRKQPNLRSLAWWQQTTPEITPF LDAAQRKLLTEEIAHQTAFFGSGDYAALQGGPCHCDLFRDNALFDTDSAGNHRLGGFFDFYFAGDDKWLFDLAVTVNDWC IDLATGTIDMERAQAMLRAYHAVRPLTAVEAAHWQDMLRAGALRFWVSRLWDFYLPREADMLQPHDPTHFERILRRRIDD AAALPWI
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KHSE_RALME (Q1LK22)
Other databases:
- EMBL: CP000352 - RefSeq: YP_584773.1 - ProteinModelPortal: Q1LK22 - SMR: Q1LK22 - STRING: Q1LK22 - GeneID: 4039453 - GenomeReviews: CP000352_GR - KEGG: rme:Rmet_2627 - eggNOG: COG2334 - HOGENOM: HBG309377 - OMA: ADLFRDN - ProtClustDB: PRK05231 - BioCyc: RMET266264:RMET_2627-MONOMER - HAMAP: MF_00301 - InterPro: IPR002575 - InterPro: IPR005280 - InterPro: IPR011009 - TIGRFAMs: TIGR00938
Pfam domain/function: PF01636 APH; SSF56112 Kinase_like
EC number: =2.7.1.39
Molecular weight: Translated: 37361; Mature: 37230
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFTTVSQDEIARWLLDYDLGEVRALRGIASGIENSNFFLTMEQDGVTREYVLTIFERL CCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHH QFDQLPYYLHLMDHLARHGICVPAPMPARDGEILRELKGKPATIVTRLPGASQLAPQPDH HHHCCCHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHH CAEVGAMLARMHIAGQDYPRKQPNLRSLAWWQQTTPEITPFLDAAQRKLLTEEIAHQTAF HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC FGSGDYAALQGGPCHCDLFRDNALFDTDSAGNHRLGGFFDFYFAGDDKWLFDLAVTVNDW CCCCCEEEECCCCCEEEEECCCCEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCE CIDLATGTIDMERAQAMLRAYHAVRPLTAVEAAHWQDMLRAGALRFWVSRLWDFYLPREA EEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DMLQPHDPTHFERILRRRIDDAAALPWI CCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVFTTVSQDEIARWLLDYDLGEVRALRGIASGIENSNFFLTMEQDGVTREYVLTIFERL CEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHH QFDQLPYYLHLMDHLARHGICVPAPMPARDGEILRELKGKPATIVTRLPGASQLAPQPDH HHHCCCHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHH CAEVGAMLARMHIAGQDYPRKQPNLRSLAWWQQTTPEITPFLDAAQRKLLTEEIAHQTAF HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC FGSGDYAALQGGPCHCDLFRDNALFDTDSAGNHRLGGFFDFYFAGDDKWLFDLAVTVNDW CCCCCEEEECCCCCEEEEECCCCEECCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCE CIDLATGTIDMERAQAMLRAYHAVRPLTAVEAAHWQDMLRAGALRFWVSRLWDFYLPREA EEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DMLQPHDPTHFERILRRRIDDAAALPWI CCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA