| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is yhhW [C]
Identifier: 94311515
GI number: 94311515
Start: 2803361
End: 2804059
Strand: Reverse
Name: yhhW [C]
Synonym: Rmet_2579
Alternate gene names: 94311515
Gene position: 2804059-2803361 (Counterclockwise)
Preceding gene: 94311518
Following gene: 94311514
Centisome position: 71.38
GC content: 62.8
Gene sequence:
>699_bases ATGATTGAAATCCGTAAATCTGAAGAACGTGGGTATGCGGACCATGGCTGGCTCAAGTCGTACCACAGCTTCTCATTTGC TGATTACTACGACCCACGCCATGTCCAGTTCAGGTCGCTGCGCGTGATCAACGAGGACCGCGTGGCGCCGGGCATGGGCT TCGGCACCCATGGGCACCGGGACATGGAGATCATCAGCTATGTGCTTGAAGGCGAGCTGGCCCACAAGGACAGCATGGGC AACGGCAGCGTGATCCGTCCGGGCGATGTGCAGCGCATGAGCGCCGGCACGGGCGTGCGTCATTCGGAATACAACCACGC GGCGCACGATACGACGCATTTCCTGCAGATCTGGATCATGCCGAACGAGACCGGCATCGAACCCGGCTACGAGGAGAAGC GCTTCGAAGCCGCCGACAAGCGCGGTCGCCTGCGCCTGGTGGGTAGCCCGGACGGCGCCGAAGGCTCGGTGGTGATCCAT CAGGATGTGCGCCTGTACGCTGGCCTGTTCGATGGCGATGAAGCTGCCACGCTGTCGTTGGCGCCGGGCCGTCGCGCCTA TGTCCACGTGGCACGTGGGCGTATCAGCGTGAACGGCCAGGTGCTCGAGGCTGGCGACGCTGCGAAGCTGGAAGACGTGG AAACCGTGAACCTGTCGCAAGGCAGCGGGGCCGAGGTGCTGGTCTTCGATCTGTCCTGA
Upstream 100 bases:
>100_bases TATACTCCCGCTGCCCTAAACTGCCTAGCATCGAAACGCCACGACCCATATGGATCTAGCCACCTGGGTCGATAGCCAGG CCACAAGGAGGGCCATCAAA
Downstream 100 bases:
>100_bases CCGGCTCATCCGTTTCCTACCTCGTGGCATTGACGCCCGCTTCGGCGGGCGTTTTGTATTTTTACCGCTTTTAGCTTTTT GCTTACCAGTGCTTACACGA
Product: hypothetical protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MIEIRKSEERGYADHGWLKSYHSFSFADYYDPRHVQFRSLRVINEDRVAPGMGFGTHGHRDMEIISYVLEGELAHKDSMG NGSVIRPGDVQRMSAGTGVRHSEYNHAAHDTTHFLQIWIMPNETGIEPGYEEKRFEAADKRGRLRLVGSPDGAEGSVVIH QDVRLYAGLFDGDEAATLSLAPGRRAYVHVARGRISVNGQVLEAGDAAKLEDVETVNLSQGSGAEVLVFDLS
Sequences:
>Translated_232_residues MIEIRKSEERGYADHGWLKSYHSFSFADYYDPRHVQFRSLRVINEDRVAPGMGFGTHGHRDMEIISYVLEGELAHKDSMG NGSVIRPGDVQRMSAGTGVRHSEYNHAAHDTTHFLQIWIMPNETGIEPGYEEKRFEAADKRGRLRLVGSPDGAEGSVVIH QDVRLYAGLFDGDEAATLSLAPGRRAYVHVARGRISVNGQVLEAGDAAKLEDVETVNLSQGSGAEVLVFDLS >Mature_232_residues MIEIRKSEERGYADHGWLKSYHSFSFADYYDPRHVQFRSLRVINEDRVAPGMGFGTHGHRDMEIISYVLEGELAHKDSMG NGSVIRPGDVQRMSAGTGVRHSEYNHAAHDTTHFLQIWIMPNETGIEPGYEEKRFEAADKRGRLRLVGSPDGAEGSVVIH QDVRLYAGLFDGDEAATLSLAPGRRAYVHVARGRISVNGQVLEAGDAAKLEDVETVNLSQGSGAEVLVFDLS
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=188, Percent_Identity=30.3191489361702, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI4505823, Length=188, Percent_Identity=30.3191489361702, Blast_Score=71, Evalue=9e-13, Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=48.0519480519481, Blast_Score=238, Evalue=2e-64, Organism=Escherichia coli, GI1789493, Length=236, Percent_Identity=30.9322033898305, Blast_Score=122, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 25666; Mature: 25666
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEIRKSEERGYADHGWLKSYHSFSFADYYDPRHVQFRSLRVINEDRVAPGMGFGTHGHR CCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC DMEIISYVLEGELAHKDSMGNGSVIRPGDVQRMSAGTGVRHSEYNHAAHDTTHFLQIWIM HHHHHHHHHHCCHHCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEE PNETGIEPGYEEKRFEAADKRGRLRLVGSPDGAEGSVVIHQDVRLYAGLFDGDEAATLSL ECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCEEEEEEECCCCCEEEEE APGRRAYVHVARGRISVNGQVLEAGDAAKLEDVETVNLSQGSGAEVLVFDLS CCCCEEEEEEECCEEEECCEEEECCCCCCCCCCEEEEECCCCCCEEEEEECC >Mature Secondary Structure MIEIRKSEERGYADHGWLKSYHSFSFADYYDPRHVQFRSLRVINEDRVAPGMGFGTHGHR CCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCC DMEIISYVLEGELAHKDSMGNGSVIRPGDVQRMSAGTGVRHSEYNHAAHDTTHFLQIWIM HHHHHHHHHHCCHHCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEE PNETGIEPGYEEKRFEAADKRGRLRLVGSPDGAEGSVVIHQDVRLYAGLFDGDEAATLSL ECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCEEEEEEECCCCCEEEEE APGRRAYVHVARGRISVNGQVLEAGDAAKLEDVETVNLSQGSGAEVLVFDLS CCCCEEEEEEECCEEEECCEEEECCCCCCCCCCEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]