Click here to switch to the map view.

The map label for this gene is 94311501

Identifier: 94311501

GI number: 94311501

Start: 2789800

End: 2791056

Strand: Reverse

Name: 94311501

Synonym: Rmet_2565

Alternate gene names: NA

Gene position: 2791056-2789800 (Counterclockwise)

Preceding gene: 94311502

Following gene: 94311497

Centisome position: 71.05

GC content: 66.51

Gene sequence:

>1257_bases
ATGAGCGGCTTCTCCATGCTTCCCGATCTCCACTTTACCGGCGGCAAGGCGGCGTGGCCCGATGCGCGGCGTCTGCCGCG
CGAGGGGCTGGCGCAGGCACTCGTGGAATCGCGCAACCGCACGCTGGCGTGGCTGGGTGCGTTCGGTCAGACACGCCGTG
GCTGGACCGTCCCGCGCCAGTACGATTGCAACCCGCCGCTGTGGACGCTGGGCCACGTCGCCTGGCACGCCGAGTGGTGG
TGTCTGCGCGGTGTGCGCCATCTGGAGCAGGGCGGTATCCGCCTGCCGGTAGCCAGCGAGCCATCCTTGCTTGATGGTGC
TGATGAATGGTTCGATCCCGAGCGCATTGGTCCTGACGAGCGCTGGGAAATCGCGCTGCCAGATGTATCGCGCGTCAAGC
AGTACGCGGCCCAAGTGCTGGATGGATTGCTGCGCCGCATCGCGCTGCTGGCCAACGACGATGATGCAACGCTGTACCCG
TTCCGCCGCGCGCTGTACCACGAGGATGTGCAGGGGGAGACCATCGCGGCATTGTTGCAATCATTGGGCGTAGCGCCGGC
TGAGCCGGCATCCGTGGGCCTGGCGGCATCGGTCTCTCACAACGACGCGCTGCATTTTCCGGGCGGAAACTTCACGCAAG
GCTGGAGCGATGCAGATGGTTTCGCATGGCCCGATGAACTGCCGCCCCAGAAGGTCTATGTGCCGGCGTTCGAGATGGAT
GCGGCACTGGTCTCCAACGCGCAATACCTCGAGTTCGTCGAGGACGGCGGCTATGAGCATCCTGCGTACTGGTCCGCGGC
GGGCCGCCAGTGGCTGATGATGCAGGAGCGGTCCGCGCCGCGCTACTGGTCTCGCCATGCCGTGACGCGAAGCTGGGTGG
TATCGCGCTTCGGAGCCGAGCGCACACTCAACCCTGATGAGCCGGTGCGGCACGTAACCCTGTTCGAGGCGCAGGCATGG
TGCGTGTGGGCGGGTCGCCGCCTGCCGCAGGAAATCGAATGGGAACTGGCGGCCACGCAGAATCGCGGACTCCAGTGGGG
CGCGCTGCGCGAATGGACCGCCACGCCATACGAGCCCTATCTGGGCTTCAGCGCGGAGCCGACGGACGGCGAGATCGTCG
GCCGCTTCGGCACCCATCAGGTGGTGCGAGGTGTGTCGTTTGCGAGCCCTGCGCGACTGCGCCATACGCGTGCGCGAACC
GCGCTGTTGCCCGAGGACGATGTGTCGTTCGTCGGGTTCAGGACGTGCGCGGTGTGA

Upstream 100 bases:

>100_bases
GGGGATAGGGCGCGCGGGAAATGGCACCGGCTCGCCGGTGTCATAATGCGCGCAGCCGGCGTGTCCGGCTTTTCTTTCAC
CCTCAGTCACGGACCTTGCG

Downstream 100 bases:

>100_bases
GGGGGTATCAGCGGCTCGCGCTCGTCGCACGCAAGCCGGCGGCATAAAAAAAGGCACCCGAAGGTGCCTTTTTTATTTAT
CGCTCGTAACGCGAGCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSGFSMLPDLHFTGGKAAWPDARRLPREGLAQALVESRNRTLAWLGAFGQTRRGWTVPRQYDCNPPLWTLGHVAWHAEWW
CLRGVRHLEQGGIRLPVASEPSLLDGADEWFDPERIGPDERWEIALPDVSRVKQYAAQVLDGLLRRIALLANDDDATLYP
FRRALYHEDVQGETIAALLQSLGVAPAEPASVGLAASVSHNDALHFPGGNFTQGWSDADGFAWPDELPPQKVYVPAFEMD
AALVSNAQYLEFVEDGGYEHPAYWSAAGRQWLMMQERSAPRYWSRHAVTRSWVVSRFGAERTLNPDEPVRHVTLFEAQAW
CVWAGRRLPQEIEWELAATQNRGLQWGALREWTATPYEPYLGFSAEPTDGEIVGRFGTHQVVRGVSFASPARLRHTRART
ALLPEDDVSFVGFRTCAV

Sequences:

>Translated_418_residues
MSGFSMLPDLHFTGGKAAWPDARRLPREGLAQALVESRNRTLAWLGAFGQTRRGWTVPRQYDCNPPLWTLGHVAWHAEWW
CLRGVRHLEQGGIRLPVASEPSLLDGADEWFDPERIGPDERWEIALPDVSRVKQYAAQVLDGLLRRIALLANDDDATLYP
FRRALYHEDVQGETIAALLQSLGVAPAEPASVGLAASVSHNDALHFPGGNFTQGWSDADGFAWPDELPPQKVYVPAFEMD
AALVSNAQYLEFVEDGGYEHPAYWSAAGRQWLMMQERSAPRYWSRHAVTRSWVVSRFGAERTLNPDEPVRHVTLFEAQAW
CVWAGRRLPQEIEWELAATQNRGLQWGALREWTATPYEPYLGFSAEPTDGEIVGRFGTHQVVRGVSFASPARLRHTRART
ALLPEDDVSFVGFRTCAV
>Mature_417_residues
SGFSMLPDLHFTGGKAAWPDARRLPREGLAQALVESRNRTLAWLGAFGQTRRGWTVPRQYDCNPPLWTLGHVAWHAEWWC
LRGVRHLEQGGIRLPVASEPSLLDGADEWFDPERIGPDERWEIALPDVSRVKQYAAQVLDGLLRRIALLANDDDATLYPF
RRALYHEDVQGETIAALLQSLGVAPAEPASVGLAASVSHNDALHFPGGNFTQGWSDADGFAWPDELPPQKVYVPAFEMDA
ALVSNAQYLEFVEDGGYEHPAYWSAAGRQWLMMQERSAPRYWSRHAVTRSWVVSRFGAERTLNPDEPVRHVTLFEAQAWC
VWAGRRLPQEIEWELAATQNRGLQWGALREWTATPYEPYLGFSAEPTDGEIVGRFGTHQVVRGVSFASPARLRHTRARTA
LLPEDDVSFVGFRTCAV

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI257470975, Length=162, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI257470977, Length=174, Percent_Identity=31.6091954022989, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI38202250, Length=174, Percent_Identity=31.6091954022989, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46965; Mature: 46834

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFSMLPDLHFTGGKAAWPDARRLPREGLAQALVESRNRTLAWLGAFGQTRRGWTVPRQ
CCCCCCCCCCEECCCCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
YDCNPPLWTLGHVAWHAEWWCLRGVRHLEQGGIRLPVASEPSLLDGADEWFDPERIGPDE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHCCCCCCCCCC
RWEIALPDVSRVKQYAAQVLDGLLRRIALLANDDDATLYPFRRALYHEDVQGETIAALLQ
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH
SLGVAPAEPASVGLAASVSHNDALHFPGGNFTQGWSDADGFAWPDELPPQKVYVPAFEMD
HHCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHH
AALVSNAQYLEFVEDGGYEHPAYWSAAGRQWLMMQERSAPRYWSRHAVTRSWVVSRFGAE
HHHHCCHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
RTLNPDEPVRHVTLFEAQAWCVWAGRRLPQEIEWELAATQNRGLQWGALREWTATPYEPY
CCCCCCCCCEEEEEEECCEEEEECCCCCCHHHCEEEEECCCCCCCCCCCCCCCCCCCCCC
LGFSAEPTDGEIVGRFGTHQVVRGVSFASPARLRHTRARTALLPEDDVSFVGFRTCAV
CCCCCCCCCCCEEECCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
SGFSMLPDLHFTGGKAAWPDARRLPREGLAQALVESRNRTLAWLGAFGQTRRGWTVPRQ
CCCCCCCCCEECCCCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
YDCNPPLWTLGHVAWHAEWWCLRGVRHLEQGGIRLPVASEPSLLDGADEWFDPERIGPDE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHCCCCCCCCCC
RWEIALPDVSRVKQYAAQVLDGLLRRIALLANDDDATLYPFRRALYHEDVQGETIAALLQ
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH
SLGVAPAEPASVGLAASVSHNDALHFPGGNFTQGWSDADGFAWPDELPPQKVYVPAFEMD
HHCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHH
AALVSNAQYLEFVEDGGYEHPAYWSAAGRQWLMMQERSAPRYWSRHAVTRSWVVSRFGAE
HHHHCCHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
RTLNPDEPVRHVTLFEAQAWCVWAGRRLPQEIEWELAATQNRGLQWGALREWTATPYEPY
CCCCCCCCCEEEEEEECCEEEEECCCCCCHHHCEEEEECCCCCCCCCCCCCCCCCCCCCC
LGFSAEPTDGEIVGRFGTHQVVRGVSFASPARLRHTRARTALLPEDDVSFVGFRTCAV
CCCCCCCCCCCEEECCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA