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The map label for this gene is 94311474

Identifier: 94311474

GI number: 94311474

Start: 2763333

End: 2764481

Strand: Direct

Name: 94311474

Synonym: Rmet_2538

Alternate gene names: NA

Gene position: 2763333-2764481 (Clockwise)

Preceding gene: 335055604

Following gene: 94311475

Centisome position: 70.35

GC content: 63.19

Gene sequence:

>1149_bases
ATGAAAAGGAAGTTCCTGACCCTGGCGGCATTGGCGCCTGCTGCAGTCACTGCCCATGCGCAGACCAGCGTGACGCTTTA
CGGAGTGATTGACGGATCCGTCGAGTACGTCAACCGCGTGGCCGCTGGCGCGGCCACGCCCACGCAGGGCGGCAGCCGCT
TCGGCATGCCGAGCGTTGGCGGCCTGTCCGCCTCGCGCTGGGGCCTGCGCGGCGTGGAAGACCTGGGTGCCGGCAACTCG
GCGATGTTCGTGCTGGAAAGCGGCTTCCAGTGGGATTCCGGAGCCCTGCAAAGCGCCCCGCTGTTCAACCGCCAGTCCTA
CATCGGCTTGCAGAACAAGGAATACGGCAAGCTCAGCTTCGGGCGTCAGTACACTTCTTTCTTCGATGGCATGGCCAACT
TCGCGCCGCTGCGCTTTGCCGCCACCTACGAACCGGGGATCTGGTGGATGGGCCTGAACTACCGCGAAGACAATATGGTC
AAGTACACCGGCCAGTTCGGACCGCTGCAGGCCGTGGGCCACTTCTCGTTCGGTACCGGCACGGCAGTGCAGAACGCCAA
CATCGTGTTGGCCAACGGCGGCGTGGGTGAAACACCGGGTAATTTCACCGACAACACCGCCTACGGCGGTTCGCTGATGT
ACCTGGACAGCAGCGGCCTGGGATTCTCAGTTGCCGCGGACATCTGGCGCCCGGCCGCCGTAACGGGCCAACCGGGCAGG
GTGAACAAGTATGGCGCCGCCGCGCTCTACAACACCGGGCCGTTCAAGTTCACGGCGGGGTACCGCTACAACAAGGGCGA
GTTCTCCAATGGCGCCACCGTGCTGCGTGACGACTACTGGTGGGCCGGCATCAACTACCAGGCAACGCCCGCGCTGGGCC
TGTCGTTGGCGTACTACTACGCGGACATCAAGAGCGCACGCACTGCGGCCACGTCGCCGGAGACCAACCCGGCAAATATG
CAGCAGGTCAGCTTCATTGCCGACTACAACTTCAGCAAGCGTACGGACGTGTACCTGTCCGTTGGCTATGCCCACAACGG
TGGGTTGAGCTTCGACAGCACCGCCACTGCCTTTGCGTTCAAGTACCCGACCATGACCGGTCAGCAAAATATGGTCGGCG
TGACGGTGGGCGTACGCCAGGTCTTCTGA

Upstream 100 bases:

>100_bases
GCACAGGCACGCGCCCGAGAAACAGCGCGACCGGACGGGCCGGAACCACACCTCGTGTACCTGCCGCCGGAATCCAAAAA
CGATACGGAGACCCTCAAGC

Downstream 100 bases:

>100_bases
CACAAGACGGCGGGCACCCGATACGCCGGACACTTTCGTCCGGCGTCCGGTACGCGGGATTTCCCGCTACCCGCTACCCG
ATTATGGGGGGTCGCAGAGC

Product: outer membrane protein (porin)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKRKFLTLAALAPAAVTAHAQTSVTLYGVIDGSVEYVNRVAAGAATPTQGGSRFGMPSVGGLSASRWGLRGVEDLGAGNS
AMFVLESGFQWDSGALQSAPLFNRQSYIGLQNKEYGKLSFGRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMV
KYTGQFGPLQAVGHFSFGTGTAVQNANIVLANGGVGETPGNFTDNTAYGGSLMYLDSSGLGFSVAADIWRPAAVTGQPGR
VNKYGAAALYNTGPFKFTAGYRYNKGEFSNGATVLRDDYWWAGINYQATPALGLSLAYYYADIKSARTAATSPETNPANM
QQVSFIADYNFSKRTDVYLSVGYAHNGGLSFDSTATAFAFKYPTMTGQQNMVGVTVGVRQVF

Sequences:

>Translated_382_residues
MKRKFLTLAALAPAAVTAHAQTSVTLYGVIDGSVEYVNRVAAGAATPTQGGSRFGMPSVGGLSASRWGLRGVEDLGAGNS
AMFVLESGFQWDSGALQSAPLFNRQSYIGLQNKEYGKLSFGRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMV
KYTGQFGPLQAVGHFSFGTGTAVQNANIVLANGGVGETPGNFTDNTAYGGSLMYLDSSGLGFSVAADIWRPAAVTGQPGR
VNKYGAAALYNTGPFKFTAGYRYNKGEFSNGATVLRDDYWWAGINYQATPALGLSLAYYYADIKSARTAATSPETNPANM
QQVSFIADYNFSKRTDVYLSVGYAHNGGLSFDSTATAFAFKYPTMTGQQNMVGVTVGVRQVF
>Mature_382_residues
MKRKFLTLAALAPAAVTAHAQTSVTLYGVIDGSVEYVNRVAAGAATPTQGGSRFGMPSVGGLSASRWGLRGVEDLGAGNS
AMFVLESGFQWDSGALQSAPLFNRQSYIGLQNKEYGKLSFGRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMV
KYTGQFGPLQAVGHFSFGTGTAVQNANIVLANGGVGETPGNFTDNTAYGGSLMYLDSSGLGFSVAADIWRPAAVTGQPGR
VNKYGAAALYNTGPFKFTAGYRYNKGEFSNGATVLRDDYWWAGINYQATPALGLSLAYYYADIKSARTAATSPETNPANM
QQVSFIADYNFSKRTDVYLSVGYAHNGGLSFDSTATAFAFKYPTMTGQQNMVGVTVGVRQVF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40915; Mature: 40915

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKFLTLAALAPAAVTAHAQTSVTLYGVIDGSVEYVNRVAAGAATPTQGGSRFGMPSVG
CCCEEEEEEECCCHHEEEECCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
GLSASRWGLRGVEDLGAGNSAMFVLESGFQWDSGALQSAPLFNRQSYIGLQNKEYGKLSF
CCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEC
GRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMVKYTGQFGPLQAVGHFSFGTG
CCHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCEEEEECCCCCEEEEEEEECCCC
TAVQNANIVLANGGVGETPGNFTDNTAYGGSLMYLDSSGLGFSVAADIWRPAAVTGQPGR
CEEECCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCCCCC
VNKYGAAALYNTGPFKFTAGYRYNKGEFSNGATVLRDDYWWAGINYQATPALGLSLAYYY
CCCCCCEEEECCCCEEEECCEEECCCCCCCCCEEEECCEEEECCCEECCCCHHHEEEEEH
ADIKSARTAATSPETNPANMQQVSFIADYNFSKRTDVYLSVGYAHNGGLSFDSTATAFAF
HHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEE
KYPTMTGQQNMVGVTVGVRQVF
ECCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKRKFLTLAALAPAAVTAHAQTSVTLYGVIDGSVEYVNRVAAGAATPTQGGSRFGMPSVG
CCCEEEEEEECCCHHEEEECCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
GLSASRWGLRGVEDLGAGNSAMFVLESGFQWDSGALQSAPLFNRQSYIGLQNKEYGKLSF
CCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEEC
GRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMVKYTGQFGPLQAVGHFSFGTG
CCHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCEEEEECCCCCEEEEEEEECCCC
TAVQNANIVLANGGVGETPGNFTDNTAYGGSLMYLDSSGLGFSVAADIWRPAAVTGQPGR
CEEECCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCCCCC
VNKYGAAALYNTGPFKFTAGYRYNKGEFSNGATVLRDDYWWAGINYQATPALGLSLAYYY
CCCCCCEEEECCCCEEEECCEEECCCCCCCCCEEEECCEEEECCCEECCCCHHHEEEEEH
ADIKSARTAATSPETNPANMQQVSFIADYNFSKRTDVYLSVGYAHNGGLSFDSTATAFAF
HHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEE
KYPTMTGQQNMVGVTVGVRQVF
ECCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]